Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20870 and ABZR86_RS20875 are separated by 38 nucleotides ABZR86_RS20875 and ABZR86_RS20880 overlap by 2 nucleotides ABZR86_RS20880 and ABZR86_RS20885 are separated by 100 nucleotides
ABZR86_RS20870: ABZR86_RS20870 - alcohol dehydrogenase catalytic domain-containing protein, at 145,193 to 146,230
_RS20870
ABZR86_RS20875: ABZR86_RS20875 - YciI family protein, at 146,269 to 146,835
_RS20875
ABZR86_RS20880: ABZR86_RS20880 - ester cyclase, at 146,834 to 147,382
_RS20880
ABZR86_RS20885: ABZR86_RS20885 - hypothetical protein, at 147,483 to 147,968
_RS20885
Position (kb) 146
147 Strain fitness (log2 ratio) -1
0
1 at 145.310 kb on - strand, within ABZR86_RS20870 at 145.749 kb on - strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.835 kb on + strand, within ABZR86_RS20870 at 145.836 kb on - strand, within ABZR86_RS20870 at 146.156 kb on + strand at 146.272 kb on + strand at 147.296 kb on + strand, within ABZR86_RS20880 at 147.296 kb on + strand, within ABZR86_RS20880 at 147.296 kb on + strand, within ABZR86_RS20880 at 147.296 kb on + strand, within ABZR86_RS20880 at 147.296 kb on + strand, within ABZR86_RS20880 at 147.347 kb on + strand at 147.347 kb on + strand at 147.347 kb on + strand at 147.348 kb on - strand at 147.348 kb on - strand at 147.439 kb on + strand at 147.498 kb on + strand at 147.499 kb on - strand at 147.499 kb on - strand at 147.591 kb on + strand, within ABZR86_RS20885 at 147.591 kb on + strand, within ABZR86_RS20885 at 147.592 kb on - strand, within ABZR86_RS20885 at 147.592 kb on - strand, within ABZR86_RS20885 at 147.651 kb on + strand, within ABZR86_RS20885 at 147.652 kb on - strand, within ABZR86_RS20885 at 147.652 kb on - strand, within ABZR86_RS20885 at 147.707 kb on + strand, within ABZR86_RS20885 at 147.708 kb on - strand, within ABZR86_RS20885 at 147.708 kb on - strand, within ABZR86_RS20885 at 147.711 kb on + strand, within ABZR86_RS20885 at 147.712 kb on - strand, within ABZR86_RS20885 at 147.712 kb on - strand, within ABZR86_RS20885 at 147.712 kb on - strand, within ABZR86_RS20885 at 147.712 kb on - strand, within ABZR86_RS20885 at 147.808 kb on - strand, within ABZR86_RS20885
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 145,310 - ABZR86_RS20870 0.11 +0.1 145,749 - ABZR86_RS20870 0.54 +0.0 145,835 + ABZR86_RS20870 0.62 -0.2 145,835 + ABZR86_RS20870 0.62 -0.4 145,835 + ABZR86_RS20870 0.62 +0.0 145,835 + ABZR86_RS20870 0.62 +0.7 145,836 - ABZR86_RS20870 0.62 +1.2 146,156 + +0.0 146,272 + -0.1 147,296 + ABZR86_RS20880 0.84 +0.2 147,296 + ABZR86_RS20880 0.84 +1.5 147,296 + ABZR86_RS20880 0.84 +0.6 147,296 + ABZR86_RS20880 0.84 -0.4 147,296 + ABZR86_RS20880 0.84 -0.7 147,347 + +0.8 147,347 + -0.7 147,347 + -0.3 147,348 - -0.5 147,348 - -0.0 147,439 + -0.4 147,498 + +0.0 147,499 - -0.2 147,499 - +0.6 147,591 + ABZR86_RS20885 0.22 -0.7 147,591 + ABZR86_RS20885 0.22 +0.6 147,592 - ABZR86_RS20885 0.22 -0.4 147,592 - ABZR86_RS20885 0.22 +0.1 147,651 + ABZR86_RS20885 0.35 +1.7 147,652 - ABZR86_RS20885 0.35 +0.6 147,652 - ABZR86_RS20885 0.35 +0.7 147,707 + ABZR86_RS20885 0.46 +0.1 147,708 - ABZR86_RS20885 0.46 +0.2 147,708 - ABZR86_RS20885 0.46 -0.5 147,711 + ABZR86_RS20885 0.47 -0.5 147,712 - ABZR86_RS20885 0.47 +1.3 147,712 - ABZR86_RS20885 0.47 -0.3 147,712 - ABZR86_RS20885 0.47 -0.7 147,712 - ABZR86_RS20885 0.47 -0.1 147,808 - ABZR86_RS20885 0.67 -0.4
Or see this region's nucleotide sequence