Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11765 and ABZR86_RS11770 overlap by 1 nucleotides ABZR86_RS11770 and ABZR86_RS11775 overlap by 8 nucleotides ABZR86_RS11775 and ABZR86_RS11780 overlap by 1 nucleotides
ABZR86_RS11765: ABZR86_RS11765 - VWA domain-containing protein, at 2,638,512 to 2,640,401
_RS11765
ABZR86_RS11770: ABZR86_RS11770 - VWA domain-containing protein, at 2,640,401 to 2,641,387
_RS11770
ABZR86_RS11775: ABZR86_RS11775 - DUF4381 family protein, at 2,641,380 to 2,641,910
_RS11775
ABZR86_RS11780: ABZR86_RS11780 - DUF58 domain-containing protein, at 2,641,910 to 2,642,848
_RS11780
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.594 kb on - strand, within ABZR86_RS11765 at 2639.733 kb on + strand, within ABZR86_RS11765 at 2639.734 kb on - strand, within ABZR86_RS11765 at 2639.986 kb on + strand, within ABZR86_RS11765 at 2640.074 kb on + strand, within ABZR86_RS11765 at 2640.075 kb on - strand, within ABZR86_RS11765 at 2640.137 kb on - strand, within ABZR86_RS11765 at 2640.328 kb on + strand at 2640.328 kb on + strand at 2640.723 kb on + strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.724 kb on - strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.945 kb on + strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2640.946 kb on - strand, within ABZR86_RS11770 at 2641.166 kb on + strand, within ABZR86_RS11770 at 2641.167 kb on - strand, within ABZR86_RS11770 at 2641.627 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.693 kb on + strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.694 kb on - strand, within ABZR86_RS11775 at 2641.901 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 2,639,594 - ABZR86_RS11765 0.57 -1.3 2,639,594 - ABZR86_RS11765 0.57 +1.0 2,639,733 + ABZR86_RS11765 0.65 -0.0 2,639,734 - ABZR86_RS11765 0.65 -0.5 2,639,986 + ABZR86_RS11765 0.78 -0.6 2,640,074 + ABZR86_RS11765 0.83 -0.2 2,640,075 - ABZR86_RS11765 0.83 -0.1 2,640,137 - ABZR86_RS11765 0.86 +2.7 2,640,328 + -0.3 2,640,328 + -0.5 2,640,723 + ABZR86_RS11770 0.33 -0.2 2,640,724 - ABZR86_RS11770 0.33 +0.3 2,640,724 - ABZR86_RS11770 0.33 +0.8 2,640,945 + ABZR86_RS11770 0.55 -0.9 2,640,945 + ABZR86_RS11770 0.55 +0.2 2,640,946 - ABZR86_RS11770 0.55 -1.0 2,640,946 - ABZR86_RS11770 0.55 -0.0 2,641,166 + ABZR86_RS11770 0.78 -0.2 2,641,167 - ABZR86_RS11770 0.78 -0.3 2,641,627 + ABZR86_RS11775 0.47 +0.3 2,641,693 + ABZR86_RS11775 0.59 -0.3 2,641,693 + ABZR86_RS11775 0.59 -0.5 2,641,693 + ABZR86_RS11775 0.59 -0.6 2,641,693 + ABZR86_RS11775 0.59 +0.2 2,641,693 + ABZR86_RS11775 0.59 +0.2 2,641,693 + ABZR86_RS11775 0.59 -0.2 2,641,693 + ABZR86_RS11775 0.59 +0.8 2,641,693 + ABZR86_RS11775 0.59 -1.8 2,641,693 + ABZR86_RS11775 0.59 +2.1 2,641,693 + ABZR86_RS11775 0.59 -0.9 2,641,694 - ABZR86_RS11775 0.59 +0.5 2,641,694 - ABZR86_RS11775 0.59 +0.7 2,641,694 - ABZR86_RS11775 0.59 +0.2 2,641,694 - ABZR86_RS11775 0.59 -0.1 2,641,694 - ABZR86_RS11775 0.59 -0.6 2,641,694 - ABZR86_RS11775 0.59 +0.1 2,641,694 - ABZR86_RS11775 0.59 +0.5 2,641,694 - ABZR86_RS11775 0.59 +0.2 2,641,901 + -0.9
Or see this region's nucleotide sequence