Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS07750

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS07745 and ABZR86_RS07750 are separated by 91 nucleotidesABZR86_RS07750 and ABZR86_RS07755 are separated by 266 nucleotides ABZR86_RS07745: ABZR86_RS07745 - EAL domain-containing protein, at 1,721,549 to 1,724,269 _RS07745 ABZR86_RS07750: ABZR86_RS07750 - iron-containing redox enzyme family protein, at 1,724,361 to 1,725,134 _RS07750 ABZR86_RS07755: ABZR86_RS07755 - urocanate hydratase, at 1,725,401 to 1,727,071 _RS07755 Position (kb) 1724 1725 1726Strain fitness (log2 ratio) -2 -1 0 1 2at 1723.902 kb on + strand, within ABZR86_RS07745at 1723.903 kb on - strand, within ABZR86_RS07745at 1723.903 kb on - strand, within ABZR86_RS07745at 1723.903 kb on - strand, within ABZR86_RS07745at 1724.040 kb on + strandat 1724.041 kb on - strandat 1724.041 kb on - strandat 1724.088 kb on + strandat 1724.088 kb on + strandat 1724.089 kb on - strandat 1724.191 kb on + strandat 1724.191 kb on + strandat 1724.191 kb on + strandat 1724.192 kb on - strandat 1724.192 kb on - strandat 1724.229 kb on + strandat 1724.230 kb on - strandat 1724.290 kb on + strandat 1724.291 kb on - strandat 1724.440 kb on + strand, within ABZR86_RS07750at 1724.440 kb on + strand, within ABZR86_RS07750at 1724.440 kb on + strand, within ABZR86_RS07750at 1724.440 kb on + strand, within ABZR86_RS07750at 1724.440 kb on + strand, within ABZR86_RS07750at 1724.440 kb on + strand, within ABZR86_RS07750at 1724.441 kb on - strand, within ABZR86_RS07750at 1724.441 kb on - strand, within ABZR86_RS07750at 1724.467 kb on + strand, within ABZR86_RS07750at 1724.467 kb on + strand, within ABZR86_RS07750at 1724.468 kb on - strand, within ABZR86_RS07750at 1724.468 kb on - strand, within ABZR86_RS07750at 1724.468 kb on - strand, within ABZR86_RS07750at 1724.468 kb on - strand, within ABZR86_RS07750at 1724.468 kb on - strand, within ABZR86_RS07750at 1724.468 kb on - strand, within ABZR86_RS07750at 1724.507 kb on + strand, within ABZR86_RS07750at 1724.507 kb on + strand, within ABZR86_RS07750at 1724.508 kb on - strand, within ABZR86_RS07750at 1724.508 kb on - strand, within ABZR86_RS07750at 1724.508 kb on - strand, within ABZR86_RS07750at 1724.508 kb on - strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.540 kb on + strand, within ABZR86_RS07750at 1724.541 kb on - strand, within ABZR86_RS07750at 1724.541 kb on - strand, within ABZR86_RS07750at 1724.541 kb on - strand, within ABZR86_RS07750at 1724.541 kb on - strand, within ABZR86_RS07750at 1724.548 kb on + strand, within ABZR86_RS07750at 1724.548 kb on + strand, within ABZR86_RS07750at 1724.549 kb on - strand, within ABZR86_RS07750at 1724.549 kb on - strand, within ABZR86_RS07750at 1724.549 kb on - strand, within ABZR86_RS07750at 1724.614 kb on + strand, within ABZR86_RS07750at 1724.614 kb on + strand, within ABZR86_RS07750at 1724.614 kb on + strand, within ABZR86_RS07750at 1724.614 kb on + strand, within ABZR86_RS07750at 1724.614 kb on + strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.615 kb on - strand, within ABZR86_RS07750at 1724.669 kb on - strand, within ABZR86_RS07750at 1724.669 kb on - strand, within ABZR86_RS07750at 1724.669 kb on - strand, within ABZR86_RS07750at 1724.712 kb on + strand, within ABZR86_RS07750at 1724.712 kb on + strand, within ABZR86_RS07750at 1724.712 kb on + strand, within ABZR86_RS07750at 1724.712 kb on + strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.713 kb on - strand, within ABZR86_RS07750at 1724.847 kb on - strand, within ABZR86_RS07750at 1724.894 kb on - strand, within ABZR86_RS07750at 1724.921 kb on + strand, within ABZR86_RS07750at 1724.921 kb on + strand, within ABZR86_RS07750at 1724.921 kb on + strand, within ABZR86_RS07750at 1724.922 kb on - strand, within ABZR86_RS07750at 1724.922 kb on - strand, within ABZR86_RS07750at 1724.922 kb on - strand, within ABZR86_RS07750at 1724.923 kb on + strand, within ABZR86_RS07750at 1724.924 kb on - strand, within ABZR86_RS07750at 1724.924 kb on - strand, within ABZR86_RS07750at 1724.924 kb on - strand, within ABZR86_RS07750at 1724.924 kb on - strand, within ABZR86_RS07750at 1724.924 kb on - strand, within ABZR86_RS07750at 1724.924 kb on - strand, within ABZR86_RS07750at 1725.015 kb on + strand, within ABZR86_RS07750at 1725.015 kb on + strand, within ABZR86_RS07750at 1725.016 kb on - strand, within ABZR86_RS07750at 1725.016 kb on - strand, within ABZR86_RS07750at 1725.086 kb on - strandat 1725.129 kb on - strandat 1725.153 kb on - strandat 1725.211 kb on + strandat 1725.211 kb on + strandat 1725.211 kb on + strandat 1725.211 kb on + strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.212 kb on - strandat 1725.264 kb on + strandat 1725.265 kb on - strandat 1725.265 kb on - strandat 1725.577 kb on - strand, within ABZR86_RS07755at 1725.948 kb on + strand, within ABZR86_RS07755at 1725.948 kb on + strand, within ABZR86_RS07755at 1725.948 kb on + strand, within ABZR86_RS07755at 1725.948 kb on + strand, within ABZR86_RS07755at 1725.948 kb on + strand, within ABZR86_RS07755at 1725.948 kb on + strand, within ABZR86_RS07755at 1725.949 kb on - strand, within ABZR86_RS07755at 1725.949 kb on - strand, within ABZR86_RS07755at 1725.949 kb on - strand, within ABZR86_RS07755at 1725.949 kb on - strand, within ABZR86_RS07755at 1725.949 kb on - strand, within ABZR86_RS07755at 1726.023 kb on + strand, within ABZR86_RS07755at 1726.023 kb on + strand, within ABZR86_RS07755at 1726.023 kb on + strand, within ABZR86_RS07755at 1726.023 kb on + strand, within ABZR86_RS07755at 1726.023 kb on + strand, within ABZR86_RS07755at 1726.023 kb on + strand, within ABZR86_RS07755at 1726.024 kb on - strand, within ABZR86_RS07755at 1726.024 kb on - strand, within ABZR86_RS07755at 1726.024 kb on - strand, within ABZR86_RS07755at 1726.024 kb on - strand, within ABZR86_RS07755at 1726.024 kb on - strand, within ABZR86_RS07755

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,723,902 + ABZR86_RS07745 0.86 -0.0
1,723,903 - ABZR86_RS07745 0.87 +0.1
1,723,903 - ABZR86_RS07745 0.87 +0.2
1,723,903 - ABZR86_RS07745 0.87 +0.6
1,724,040 + +0.9
1,724,041 - +0.2
1,724,041 - -0.6
1,724,088 + +0.1
1,724,088 + +0.8
1,724,089 - +0.5
1,724,191 + +0.4
1,724,191 + +0.7
1,724,191 + +0.4
1,724,192 - -0.3
1,724,192 - +0.9
1,724,229 + +0.2
1,724,230 - +0.3
1,724,290 + -0.3
1,724,291 - +0.8
1,724,440 + ABZR86_RS07750 0.10 -0.8
1,724,440 + ABZR86_RS07750 0.10 -0.4
1,724,440 + ABZR86_RS07750 0.10 -0.5
1,724,440 + ABZR86_RS07750 0.10 -0.1
1,724,440 + ABZR86_RS07750 0.10 -0.1
1,724,440 + ABZR86_RS07750 0.10 +0.3
1,724,441 - ABZR86_RS07750 0.10 +0.2
1,724,441 - ABZR86_RS07750 0.10 -1.8
1,724,467 + ABZR86_RS07750 0.14 +1.5
1,724,467 + ABZR86_RS07750 0.14 -0.4
1,724,468 - ABZR86_RS07750 0.14 -1.2
1,724,468 - ABZR86_RS07750 0.14 -0.8
1,724,468 - ABZR86_RS07750 0.14 -0.1
1,724,468 - ABZR86_RS07750 0.14 +1.3
1,724,468 - ABZR86_RS07750 0.14 -0.2
1,724,468 - ABZR86_RS07750 0.14 -0.9
1,724,507 + ABZR86_RS07750 0.19 -0.7
1,724,507 + ABZR86_RS07750 0.19 -0.6
1,724,508 - ABZR86_RS07750 0.19 +0.1
1,724,508 - ABZR86_RS07750 0.19 -1.2
1,724,508 - ABZR86_RS07750 0.19 -1.9
1,724,508 - ABZR86_RS07750 0.19 -0.6
1,724,540 + ABZR86_RS07750 0.23 -1.6
1,724,540 + ABZR86_RS07750 0.23 +0.2
1,724,540 + ABZR86_RS07750 0.23 +0.1
1,724,540 + ABZR86_RS07750 0.23 +0.3
1,724,540 + ABZR86_RS07750 0.23 +0.1
1,724,540 + ABZR86_RS07750 0.23 -0.3
1,724,540 + ABZR86_RS07750 0.23 +0.3
1,724,540 + ABZR86_RS07750 0.23 -0.3
1,724,540 + ABZR86_RS07750 0.23 +0.5
1,724,540 + ABZR86_RS07750 0.23 -0.2
1,724,540 + ABZR86_RS07750 0.23 +0.9
1,724,541 - ABZR86_RS07750 0.23 -0.2
1,724,541 - ABZR86_RS07750 0.23 -0.5
1,724,541 - ABZR86_RS07750 0.23 -0.2
1,724,541 - ABZR86_RS07750 0.23 -1.5
1,724,548 + ABZR86_RS07750 0.24 -0.3
1,724,548 + ABZR86_RS07750 0.24 +0.1
1,724,549 - ABZR86_RS07750 0.24 -1.1
1,724,549 - ABZR86_RS07750 0.24 -1.2
1,724,549 - ABZR86_RS07750 0.24 -0.5
1,724,614 + ABZR86_RS07750 0.33 +0.2
1,724,614 + ABZR86_RS07750 0.33 -0.9
1,724,614 + ABZR86_RS07750 0.33 +0.8
1,724,614 + ABZR86_RS07750 0.33 -0.5
1,724,614 + ABZR86_RS07750 0.33 -0.2
1,724,615 - ABZR86_RS07750 0.33 +0.1
1,724,615 - ABZR86_RS07750 0.33 -1.0
1,724,615 - ABZR86_RS07750 0.33 -0.5
1,724,615 - ABZR86_RS07750 0.33 +0.6
1,724,615 - ABZR86_RS07750 0.33 +0.2
1,724,615 - ABZR86_RS07750 0.33 +0.6
1,724,615 - ABZR86_RS07750 0.33 -0.9
1,724,615 - ABZR86_RS07750 0.33 -0.8
1,724,615 - ABZR86_RS07750 0.33 -1.4
1,724,669 - ABZR86_RS07750 0.40 +0.8
1,724,669 - ABZR86_RS07750 0.40 -1.2
1,724,669 - ABZR86_RS07750 0.40 -1.7
1,724,712 + ABZR86_RS07750 0.45 -1.7
1,724,712 + ABZR86_RS07750 0.45 +0.4
1,724,712 + ABZR86_RS07750 0.45 +0.4
1,724,712 + ABZR86_RS07750 0.45 -0.1
1,724,713 - ABZR86_RS07750 0.45 -1.0
1,724,713 - ABZR86_RS07750 0.45 -0.9
1,724,713 - ABZR86_RS07750 0.45 -0.7
1,724,713 - ABZR86_RS07750 0.45 +0.8
1,724,713 - ABZR86_RS07750 0.45 -1.9
1,724,713 - ABZR86_RS07750 0.45 -0.3
1,724,713 - ABZR86_RS07750 0.45 +0.3
1,724,847 - ABZR86_RS07750 0.63 -0.0
1,724,894 - ABZR86_RS07750 0.69 +1.0
1,724,921 + ABZR86_RS07750 0.72 +0.1
1,724,921 + ABZR86_RS07750 0.72 -0.3
1,724,921 + ABZR86_RS07750 0.72 +0.5
1,724,922 - ABZR86_RS07750 0.72 +0.8
1,724,922 - ABZR86_RS07750 0.72 -0.1
1,724,922 - ABZR86_RS07750 0.72 +0.2
1,724,923 + ABZR86_RS07750 0.73 -0.3
1,724,924 - ABZR86_RS07750 0.73 -2.4
1,724,924 - ABZR86_RS07750 0.73 -0.9
1,724,924 - ABZR86_RS07750 0.73 -0.3
1,724,924 - ABZR86_RS07750 0.73 +0.5
1,724,924 - ABZR86_RS07750 0.73 -2.0
1,724,924 - ABZR86_RS07750 0.73 -0.3
1,725,015 + ABZR86_RS07750 0.84 +0.5
1,725,015 + ABZR86_RS07750 0.84 +0.8
1,725,016 - ABZR86_RS07750 0.85 -0.6
1,725,016 - ABZR86_RS07750 0.85 -1.2
1,725,086 - -0.6
1,725,129 - -0.2
1,725,153 - -0.9
1,725,211 + -0.0
1,725,211 + +0.0
1,725,211 + +0.1
1,725,211 + +0.8
1,725,212 - -0.6
1,725,212 - +0.1
1,725,212 - -0.9
1,725,212 - -0.7
1,725,212 - -0.4
1,725,212 - -0.3
1,725,212 - -0.2
1,725,212 - +0.9
1,725,264 + +0.3
1,725,265 - -1.1
1,725,265 - +0.4
1,725,577 - ABZR86_RS07755 0.11 -0.0
1,725,948 + ABZR86_RS07755 0.33 +0.1
1,725,948 + ABZR86_RS07755 0.33 -0.0
1,725,948 + ABZR86_RS07755 0.33 -0.4
1,725,948 + ABZR86_RS07755 0.33 +0.4
1,725,948 + ABZR86_RS07755 0.33 -0.1
1,725,948 + ABZR86_RS07755 0.33 +1.1
1,725,949 - ABZR86_RS07755 0.33 +0.2
1,725,949 - ABZR86_RS07755 0.33 -0.2
1,725,949 - ABZR86_RS07755 0.33 -0.0
1,725,949 - ABZR86_RS07755 0.33 -0.8
1,725,949 - ABZR86_RS07755 0.33 -1.2
1,726,023 + ABZR86_RS07755 0.37 -1.5
1,726,023 + ABZR86_RS07755 0.37 -0.5
1,726,023 + ABZR86_RS07755 0.37 -0.1
1,726,023 + ABZR86_RS07755 0.37 -0.4
1,726,023 + ABZR86_RS07755 0.37 -0.2
1,726,023 + ABZR86_RS07755 0.37 +0.6
1,726,024 - ABZR86_RS07755 0.37 +0.6
1,726,024 - ABZR86_RS07755 0.37 -0.1
1,726,024 - ABZR86_RS07755 0.37 +1.8
1,726,024 - ABZR86_RS07755 0.37 -0.5
1,726,024 - ABZR86_RS07755 0.37 +1.1

Or see this region's nucleotide sequence