Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04210 and ABZR86_RS04215 overlap by 4 nucleotides ABZR86_RS04215 and ABZR86_RS04220 are separated by 5 nucleotides
ABZR86_RS04210: ABZR86_RS04210 - non-ribosomal peptide synthetase, at 938,891 to 944,008
_RS04210
ABZR86_RS04215: ABZR86_RS04215 - non-ribosomal peptide synthetase, at 944,005 to 947,175
_RS04215
ABZR86_RS04220: ABZR86_RS04220 - amino acid adenylation domain-containing protein, at 947,181 to 950,255
_RS04220
Position (kb) 944
945
946
947
948 Strain fitness (log2 ratio) -1
0
1
2 at 943.111 kb on + strand, within ABZR86_RS04210 at 943.112 kb on - strand, within ABZR86_RS04210 at 943.428 kb on + strand, within ABZR86_RS04210 at 943.428 kb on + strand, within ABZR86_RS04210 at 943.993 kb on - strand at 944.233 kb on + strand at 944.233 kb on + strand at 944.234 kb on - strand at 944.234 kb on - strand at 944.396 kb on + strand, within ABZR86_RS04215 at 944.396 kb on + strand, within ABZR86_RS04215 at 944.397 kb on - strand, within ABZR86_RS04215 at 944.397 kb on - strand, within ABZR86_RS04215 at 944.397 kb on - strand, within ABZR86_RS04215 at 944.471 kb on + strand, within ABZR86_RS04215 at 944.471 kb on + strand, within ABZR86_RS04215 at 944.472 kb on - strand, within ABZR86_RS04215 at 944.472 kb on - strand, within ABZR86_RS04215 at 944.472 kb on - strand, within ABZR86_RS04215 at 944.472 kb on - strand, within ABZR86_RS04215 at 944.769 kb on - strand, within ABZR86_RS04215 at 944.769 kb on - strand, within ABZR86_RS04215 at 944.822 kb on + strand, within ABZR86_RS04215 at 944.822 kb on + strand, within ABZR86_RS04215 at 944.823 kb on - strand, within ABZR86_RS04215 at 944.823 kb on - strand, within ABZR86_RS04215 at 944.823 kb on - strand, within ABZR86_RS04215 at 944.823 kb on - strand, within ABZR86_RS04215 at 944.931 kb on - strand, within ABZR86_RS04215 at 945.085 kb on + strand, within ABZR86_RS04215 at 945.085 kb on + strand, within ABZR86_RS04215 at 945.086 kb on - strand, within ABZR86_RS04215 at 945.086 kb on - strand, within ABZR86_RS04215 at 945.327 kb on + strand, within ABZR86_RS04215 at 945.341 kb on + strand, within ABZR86_RS04215 at 945.341 kb on + strand, within ABZR86_RS04215 at 945.560 kb on + strand, within ABZR86_RS04215 at 945.621 kb on + strand, within ABZR86_RS04215 at 945.621 kb on + strand, within ABZR86_RS04215 at 945.622 kb on - strand, within ABZR86_RS04215 at 945.622 kb on - strand, within ABZR86_RS04215 at 945.631 kb on + strand, within ABZR86_RS04215 at 945.631 kb on + strand, within ABZR86_RS04215 at 945.631 kb on + strand, within ABZR86_RS04215 at 945.668 kb on + strand, within ABZR86_RS04215 at 945.668 kb on + strand, within ABZR86_RS04215 at 945.971 kb on + strand, within ABZR86_RS04215 at 945.971 kb on + strand, within ABZR86_RS04215 at 945.972 kb on - strand, within ABZR86_RS04215 at 945.972 kb on - strand, within ABZR86_RS04215 at 946.148 kb on - strand, within ABZR86_RS04215 at 946.224 kb on - strand, within ABZR86_RS04215 at 946.224 kb on - strand, within ABZR86_RS04215 at 946.287 kb on + strand, within ABZR86_RS04215 at 946.300 kb on + strand, within ABZR86_RS04215 at 946.686 kb on - strand, within ABZR86_RS04215 at 946.795 kb on - strand, within ABZR86_RS04215 at 947.112 kb on + strand at 947.112 kb on + strand at 947.113 kb on - strand at 947.153 kb on - strand at 947.153 kb on - strand at 947.153 kb on - strand at 947.153 kb on - strand at 947.273 kb on + strand at 947.627 kb on - strand, within ABZR86_RS04220 at 947.988 kb on - strand, within ABZR86_RS04220 at 947.988 kb on - strand, within ABZR86_RS04220 at 947.988 kb on - strand, within ABZR86_RS04220 at 947.988 kb on - strand, within ABZR86_RS04220 at 948.053 kb on + strand, within ABZR86_RS04220 at 948.054 kb on - strand, within ABZR86_RS04220 at 948.054 kb on - strand, within ABZR86_RS04220 at 948.054 kb on - strand, within ABZR86_RS04220 at 948.076 kb on + strand, within ABZR86_RS04220
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 943,111 + ABZR86_RS04210 0.82 +0.3 943,112 - ABZR86_RS04210 0.82 -0.6 943,428 + ABZR86_RS04210 0.89 +0.3 943,428 + ABZR86_RS04210 0.89 -0.6 943,993 - +0.3 944,233 + -0.2 944,233 + +0.7 944,234 - -0.0 944,234 - -0.2 944,396 + ABZR86_RS04215 0.12 -0.1 944,396 + ABZR86_RS04215 0.12 +0.7 944,397 - ABZR86_RS04215 0.12 -0.3 944,397 - ABZR86_RS04215 0.12 +0.4 944,397 - ABZR86_RS04215 0.12 -0.4 944,471 + ABZR86_RS04215 0.15 -0.0 944,471 + ABZR86_RS04215 0.15 -0.0 944,472 - ABZR86_RS04215 0.15 -0.6 944,472 - ABZR86_RS04215 0.15 +0.4 944,472 - ABZR86_RS04215 0.15 +0.3 944,472 - ABZR86_RS04215 0.15 +0.3 944,769 - ABZR86_RS04215 0.24 -0.1 944,769 - ABZR86_RS04215 0.24 -0.2 944,822 + ABZR86_RS04215 0.26 -0.7 944,822 + ABZR86_RS04215 0.26 -0.2 944,823 - ABZR86_RS04215 0.26 +1.8 944,823 - ABZR86_RS04215 0.26 +0.6 944,823 - ABZR86_RS04215 0.26 -0.3 944,823 - ABZR86_RS04215 0.26 +0.2 944,931 - ABZR86_RS04215 0.29 +0.3 945,085 + ABZR86_RS04215 0.34 +0.5 945,085 + ABZR86_RS04215 0.34 +0.5 945,086 - ABZR86_RS04215 0.34 -0.4 945,086 - ABZR86_RS04215 0.34 -0.4 945,327 + ABZR86_RS04215 0.42 -0.2 945,341 + ABZR86_RS04215 0.42 -0.1 945,341 + ABZR86_RS04215 0.42 +0.5 945,560 + ABZR86_RS04215 0.49 +0.1 945,621 + ABZR86_RS04215 0.51 -0.0 945,621 + ABZR86_RS04215 0.51 -0.9 945,622 - ABZR86_RS04215 0.51 +0.5 945,622 - ABZR86_RS04215 0.51 -0.5 945,631 + ABZR86_RS04215 0.51 +0.6 945,631 + ABZR86_RS04215 0.51 +0.1 945,631 + ABZR86_RS04215 0.51 +0.6 945,668 + ABZR86_RS04215 0.52 -0.2 945,668 + ABZR86_RS04215 0.52 +0.4 945,971 + ABZR86_RS04215 0.62 +0.4 945,971 + ABZR86_RS04215 0.62 -0.7 945,972 - ABZR86_RS04215 0.62 +0.5 945,972 - ABZR86_RS04215 0.62 +0.1 946,148 - ABZR86_RS04215 0.68 +1.3 946,224 - ABZR86_RS04215 0.70 +0.3 946,224 - ABZR86_RS04215 0.70 +0.3 946,287 + ABZR86_RS04215 0.72 +0.4 946,300 + ABZR86_RS04215 0.72 -1.1 946,686 - ABZR86_RS04215 0.85 +0.5 946,795 - ABZR86_RS04215 0.88 +0.9 947,112 + -0.2 947,112 + +0.3 947,113 - -0.4 947,153 - -1.2 947,153 - -0.0 947,153 - +0.1 947,153 - -0.9 947,273 + -0.0 947,627 - ABZR86_RS04220 0.15 +1.0 947,988 - ABZR86_RS04220 0.26 +0.0 947,988 - ABZR86_RS04220 0.26 +0.5 947,988 - ABZR86_RS04220 0.26 +0.2 947,988 - ABZR86_RS04220 0.26 -0.3 948,053 + ABZR86_RS04220 0.28 +0.6 948,054 - ABZR86_RS04220 0.28 -0.2 948,054 - ABZR86_RS04220 0.28 +0.7 948,054 - ABZR86_RS04220 0.28 -0.8 948,076 + ABZR86_RS04220 0.29 -0.2
Or see this region's nucleotide sequence