Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02835 and ABZR86_RS02840 are separated by 3 nucleotides ABZR86_RS02840 and ABZR86_RS02845 are separated by 1 nucleotides ABZR86_RS02845 and ABZR86_RS02850 are separated by 223 nucleotides
ABZR86_RS02835: ABZR86_RS02835 - lysine--tRNA ligase, at 572,860 to 574,380
_RS02835
ABZR86_RS02840: ABZR86_RS02840 - YciI family protein, at 574,384 to 574,683
_RS02840
ABZR86_RS02845: ABZR86_RS02845 - BolA family protein, at 574,685 to 574,948
_RS02845
ABZR86_RS02850: ABZR86_RS02850 - chromosome segregation protein SMC, at 575,172 to 578,681
_RS02850
Position (kb) 574
575 Strain fitness (log2 ratio) -2
-1
0
1 at 574.390 kb on + strand at 574.390 kb on + strand at 574.391 kb on - strand at 574.391 kb on - strand at 574.391 kb on - strand at 574.410 kb on + strand at 574.581 kb on + strand, within ABZR86_RS02840 at 574.581 kb on + strand, within ABZR86_RS02840 at 574.621 kb on + strand, within ABZR86_RS02840 at 574.621 kb on + strand, within ABZR86_RS02840 at 574.621 kb on + strand, within ABZR86_RS02840 at 574.621 kb on + strand, within ABZR86_RS02840 at 574.621 kb on + strand, within ABZR86_RS02840 at 574.621 kb on + strand, within ABZR86_RS02840 at 574.622 kb on - strand, within ABZR86_RS02840 at 574.622 kb on - strand, within ABZR86_RS02840 at 574.622 kb on - strand, within ABZR86_RS02840 at 574.622 kb on - strand, within ABZR86_RS02840 at 574.639 kb on + strand, within ABZR86_RS02840 at 574.639 kb on + strand, within ABZR86_RS02840 at 574.639 kb on + strand, within ABZR86_RS02840 at 574.639 kb on + strand, within ABZR86_RS02840 at 574.640 kb on - strand, within ABZR86_RS02840 at 574.874 kb on + strand, within ABZR86_RS02845 at 574.874 kb on + strand, within ABZR86_RS02845 at 574.874 kb on + strand, within ABZR86_RS02845 at 574.874 kb on + strand, within ABZR86_RS02845 at 574.875 kb on - strand, within ABZR86_RS02845 at 574.875 kb on - strand, within ABZR86_RS02845 at 574.875 kb on - strand, within ABZR86_RS02845 at 574.875 kb on - strand, within ABZR86_RS02845 at 574.875 kb on - strand, within ABZR86_RS02845 at 574.971 kb on + strand at 574.971 kb on + strand at 574.971 kb on + strand at 574.971 kb on + strand at 574.971 kb on + strand at 574.971 kb on + strand at 574.972 kb on - strand at 574.972 kb on - strand at 574.972 kb on - strand at 574.972 kb on - strand at 575.129 kb on + strand at 575.129 kb on + strand at 575.147 kb on + strand at 575.147 kb on + strand at 575.148 kb on - strand at 575.149 kb on + strand at 575.149 kb on + strand at 575.149 kb on + strand at 575.149 kb on + strand at 575.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 574,390 + +0.1 574,390 + +1.3 574,391 - +0.0 574,391 - -0.3 574,391 - +0.0 574,410 + +0.0 574,581 + ABZR86_RS02840 0.66 +0.3 574,581 + ABZR86_RS02840 0.66 +0.0 574,621 + ABZR86_RS02840 0.79 +1.5 574,621 + ABZR86_RS02840 0.79 +0.5 574,621 + ABZR86_RS02840 0.79 +0.5 574,621 + ABZR86_RS02840 0.79 +0.2 574,621 + ABZR86_RS02840 0.79 +0.0 574,621 + ABZR86_RS02840 0.79 -0.1 574,622 - ABZR86_RS02840 0.79 -0.4 574,622 - ABZR86_RS02840 0.79 -0.5 574,622 - ABZR86_RS02840 0.79 +0.8 574,622 - ABZR86_RS02840 0.79 -1.2 574,639 + ABZR86_RS02840 0.85 +0.2 574,639 + ABZR86_RS02840 0.85 -0.9 574,639 + ABZR86_RS02840 0.85 +0.3 574,639 + ABZR86_RS02840 0.85 +0.6 574,640 - ABZR86_RS02840 0.85 +0.4 574,874 + ABZR86_RS02845 0.72 +0.8 574,874 + ABZR86_RS02845 0.72 +0.2 574,874 + ABZR86_RS02845 0.72 -0.3 574,874 + ABZR86_RS02845 0.72 -0.6 574,875 - ABZR86_RS02845 0.72 -0.2 574,875 - ABZR86_RS02845 0.72 -0.1 574,875 - ABZR86_RS02845 0.72 +0.7 574,875 - ABZR86_RS02845 0.72 -0.0 574,875 - ABZR86_RS02845 0.72 -0.3 574,971 + -0.9 574,971 + -0.3 574,971 + -0.1 574,971 + -0.4 574,971 + +0.1 574,971 + -2.7 574,972 - +0.5 574,972 - +0.7 574,972 - -0.1 574,972 - -1.2 575,129 + -0.1 575,129 + -0.9 575,147 + -0.5 575,147 + +0.6 575,148 - -1.6 575,149 + +0.9 575,149 + +0.5 575,149 + +0.0 575,149 + +0.7 575,150 - +0.5
Or see this region's nucleotide sequence