Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01935 and ABZR86_RS01940 are separated by 131 nucleotides ABZR86_RS01940 and ABZR86_RS01945 are separated by 22 nucleotides ABZR86_RS01945 and ABZR86_RS01950 are separated by 13 nucleotides ABZR86_RS01950 and ABZR86_RS01955 are separated by 165 nucleotides
ABZR86_RS01935: ABZR86_RS01935 - SDR family oxidoreductase, at 420,164 to 420,976
_RS01935
ABZR86_RS01940: ABZR86_RS01940 - triose-phosphate isomerase, at 421,108 to 421,857
_RS01940
ABZR86_RS01945: ABZR86_RS01945 - preprotein translocase subunit SecG, at 421,880 to 422,335
_RS01945
ABZR86_RS01950: ABZR86_RS01950 - tRNA-Leu, at 422,349 to 422,433
_RS01950
ABZR86_RS01955: ABZR86_RS01955 - integrase arm-type DNA-binding domain-containing protein, at 422,599 to 423,900
_RS01955
Position (kb) 421
422
423 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 421.046 kb on + strand at 421.047 kb on - strand at 421.047 kb on - strand at 421.074 kb on - strand at 422.096 kb on + strand, within ABZR86_RS01945 at 422.096 kb on + strand, within ABZR86_RS01945 at 422.097 kb on - strand, within ABZR86_RS01945 at 422.097 kb on - strand, within ABZR86_RS01945 at 422.097 kb on - strand, within ABZR86_RS01945 at 422.097 kb on - strand, within ABZR86_RS01945 at 422.097 kb on - strand, within ABZR86_RS01945 at 422.333 kb on + strand at 422.333 kb on + strand at 422.333 kb on + strand at 422.333 kb on + strand at 422.333 kb on + strand at 422.486 kb on + strand at 422.599 kb on - strand at 422.609 kb on + strand at 422.609 kb on + strand at 422.610 kb on - strand at 422.622 kb on + strand at 422.623 kb on - strand at 422.665 kb on + strand at 422.665 kb on + strand at 422.665 kb on + strand at 422.697 kb on - strand at 422.697 kb on - strand at 422.718 kb on + strand at 422.719 kb on - strand at 422.719 kb on - strand at 422.831 kb on + strand, within ABZR86_RS01955 at 422.831 kb on + strand, within ABZR86_RS01955 at 422.832 kb on - strand, within ABZR86_RS01955 at 422.832 kb on - strand, within ABZR86_RS01955 at 422.859 kb on + strand, within ABZR86_RS01955 at 422.859 kb on + strand, within ABZR86_RS01955 at 422.859 kb on + strand, within ABZR86_RS01955 at 422.860 kb on - strand, within ABZR86_RS01955 at 422.860 kb on - strand, within ABZR86_RS01955 at 422.860 kb on - strand, within ABZR86_RS01955 at 422.860 kb on - strand, within ABZR86_RS01955 at 423.020 kb on - strand, within ABZR86_RS01955 at 423.020 kb on - strand, within ABZR86_RS01955 at 423.020 kb on - strand, within ABZR86_RS01955 at 423.049 kb on + strand, within ABZR86_RS01955 at 423.049 kb on + strand, within ABZR86_RS01955 at 423.049 kb on + strand, within ABZR86_RS01955 at 423.049 kb on + strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.050 kb on - strand, within ABZR86_RS01955 at 423.053 kb on + strand, within ABZR86_RS01955 at 423.053 kb on + strand, within ABZR86_RS01955 at 423.053 kb on + strand, within ABZR86_RS01955 at 423.054 kb on - strand, within ABZR86_RS01955 at 423.054 kb on - strand, within ABZR86_RS01955 at 423.054 kb on - strand, within ABZR86_RS01955 at 423.054 kb on - strand, within ABZR86_RS01955 at 423.166 kb on + strand, within ABZR86_RS01955 at 423.166 kb on + strand, within ABZR86_RS01955 at 423.166 kb on + strand, within ABZR86_RS01955 at 423.166 kb on + strand, within ABZR86_RS01955 at 423.166 kb on + strand, within ABZR86_RS01955 at 423.167 kb on - strand, within ABZR86_RS01955 at 423.167 kb on - strand, within ABZR86_RS01955 at 423.167 kb on - strand, within ABZR86_RS01955 at 423.167 kb on - strand, within ABZR86_RS01955 at 423.167 kb on - strand, within ABZR86_RS01955 at 423.210 kb on + strand, within ABZR86_RS01955 at 423.210 kb on + strand, within ABZR86_RS01955 at 423.210 kb on + strand, within ABZR86_RS01955 at 423.211 kb on - strand, within ABZR86_RS01955 at 423.267 kb on + strand, within ABZR86_RS01955 at 423.268 kb on - strand, within ABZR86_RS01955 at 423.268 kb on - strand, within ABZR86_RS01955 at 423.322 kb on + strand, within ABZR86_RS01955 at 423.322 kb on + strand, within ABZR86_RS01955 at 423.322 kb on + strand, within ABZR86_RS01955 at 423.322 kb on + strand, within ABZR86_RS01955 at 423.322 kb on + strand, within ABZR86_RS01955 at 423.323 kb on - strand, within ABZR86_RS01955 at 423.323 kb on - strand, within ABZR86_RS01955 at 423.323 kb on - strand, within ABZR86_RS01955 at 423.323 kb on - strand, within ABZR86_RS01955
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 421,046 + -2.2 421,047 - +1.0 421,047 - +0.0 421,074 - -0.3 422,096 + ABZR86_RS01945 0.47 +0.7 422,096 + ABZR86_RS01945 0.47 +0.3 422,097 - ABZR86_RS01945 0.48 +0.2 422,097 - ABZR86_RS01945 0.48 +2.4 422,097 - ABZR86_RS01945 0.48 -0.4 422,097 - ABZR86_RS01945 0.48 +1.2 422,097 - ABZR86_RS01945 0.48 +1.6 422,333 + -0.6 422,333 + -1.7 422,333 + +0.5 422,333 + +0.0 422,333 + -0.5 422,486 + -1.4 422,599 - +0.2 422,609 + -0.3 422,609 + +1.8 422,610 - +0.1 422,622 + -0.3 422,623 - -0.2 422,665 + +0.2 422,665 + -0.8 422,665 + +0.5 422,697 - -0.2 422,697 - +0.1 422,718 + +0.4 422,719 - +1.0 422,719 - +0.1 422,831 + ABZR86_RS01955 0.18 -2.0 422,831 + ABZR86_RS01955 0.18 -0.3 422,832 - ABZR86_RS01955 0.18 -0.7 422,832 - ABZR86_RS01955 0.18 +0.1 422,859 + ABZR86_RS01955 0.20 -0.4 422,859 + ABZR86_RS01955 0.20 +0.0 422,859 + ABZR86_RS01955 0.20 +0.7 422,860 - ABZR86_RS01955 0.20 -0.1 422,860 - ABZR86_RS01955 0.20 -0.2 422,860 - ABZR86_RS01955 0.20 +0.5 422,860 - ABZR86_RS01955 0.20 +0.4 423,020 - ABZR86_RS01955 0.32 +0.4 423,020 - ABZR86_RS01955 0.32 +1.0 423,020 - ABZR86_RS01955 0.32 -0.6 423,049 + ABZR86_RS01955 0.35 -0.0 423,049 + ABZR86_RS01955 0.35 +0.1 423,049 + ABZR86_RS01955 0.35 -1.2 423,049 + ABZR86_RS01955 0.35 -1.6 423,050 - ABZR86_RS01955 0.35 -0.1 423,050 - ABZR86_RS01955 0.35 -0.3 423,050 - ABZR86_RS01955 0.35 +0.0 423,050 - ABZR86_RS01955 0.35 +1.5 423,050 - ABZR86_RS01955 0.35 +0.5 423,050 - ABZR86_RS01955 0.35 +0.1 423,050 - ABZR86_RS01955 0.35 -0.5 423,053 + ABZR86_RS01955 0.35 -0.1 423,053 + ABZR86_RS01955 0.35 +0.0 423,053 + ABZR86_RS01955 0.35 +0.3 423,054 - ABZR86_RS01955 0.35 -0.5 423,054 - ABZR86_RS01955 0.35 +1.3 423,054 - ABZR86_RS01955 0.35 +0.7 423,054 - ABZR86_RS01955 0.35 -1.7 423,166 + ABZR86_RS01955 0.44 -1.2 423,166 + ABZR86_RS01955 0.44 -0.7 423,166 + ABZR86_RS01955 0.44 +0.7 423,166 + ABZR86_RS01955 0.44 +0.1 423,166 + ABZR86_RS01955 0.44 -0.4 423,167 - ABZR86_RS01955 0.44 +0.8 423,167 - ABZR86_RS01955 0.44 -0.4 423,167 - ABZR86_RS01955 0.44 +0.7 423,167 - ABZR86_RS01955 0.44 +0.4 423,167 - ABZR86_RS01955 0.44 +0.8 423,210 + ABZR86_RS01955 0.47 -0.5 423,210 + ABZR86_RS01955 0.47 +0.3 423,210 + ABZR86_RS01955 0.47 +0.2 423,211 - ABZR86_RS01955 0.47 +0.6 423,267 + ABZR86_RS01955 0.51 +0.3 423,268 - ABZR86_RS01955 0.51 -0.0 423,268 - ABZR86_RS01955 0.51 +0.1 423,322 + ABZR86_RS01955 0.56 -0.4 423,322 + ABZR86_RS01955 0.56 -0.1 423,322 + ABZR86_RS01955 0.56 -0.4 423,322 + ABZR86_RS01955 0.56 +0.5 423,322 + ABZR86_RS01955 0.56 -1.5 423,323 - ABZR86_RS01955 0.56 -0.4 423,323 - ABZR86_RS01955 0.56 -1.4 423,323 - ABZR86_RS01955 0.56 +3.0 423,323 - ABZR86_RS01955 0.56 +1.8
Or see this region's nucleotide sequence