Experiment: MoYLS4 with perchlorate 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3167 and DvMF_3168 are separated by 15 nucleotides DvMF_3168 and DvMF_3169 are separated by 295 nucleotides DvMF_3169 and DvMF_3170 are separated by 212 nucleotides
DvMF_3167: DvMF_3167 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 3,993,259 to 3,994,143
_3167
DvMF_3168: DvMF_3168 - hypothetical protein (RefSeq), at 3,994,159 to 3,995,073
_3168
DvMF_3169: DvMF_3169 - Heavy metal transport/detoxification protein (RefSeq), at 3,995,369 to 3,995,566
_3169
DvMF_3170: DvMF_3170 - heavy metal translocating P-type ATPase (RefSeq), at 3,995,779 to 3,998,589
_3170
Position (kb)
3994
3995
3996 Strain fitness (log2 ratio)
-2
-1
0
1 at 3993.256 kb on + strand at 3993.281 kb on - strand at 3993.282 kb on + strand at 3993.433 kb on + strand, within DvMF_3167 at 3993.723 kb on + strand, within DvMF_3167 at 3993.752 kb on + strand, within DvMF_3167 at 3993.765 kb on - strand, within DvMF_3167 at 3993.937 kb on - strand, within DvMF_3167 at 3994.190 kb on + strand at 3994.340 kb on + strand, within DvMF_3168 at 3994.498 kb on + strand, within DvMF_3168 at 3994.498 kb on + strand, within DvMF_3168 at 3994.869 kb on + strand, within DvMF_3168 at 3994.888 kb on + strand, within DvMF_3168 at 3994.889 kb on + strand, within DvMF_3168 at 3994.930 kb on + strand, within DvMF_3168 at 3995.169 kb on - strand at 3995.358 kb on + strand at 3995.367 kb on + strand at 3995.559 kb on - strand at 3995.561 kb on + strand at 3995.615 kb on - strand at 3995.657 kb on - strand at 3996.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with perchlorate 12.5 mM remove 3,993,256 + -1.2 3,993,281 - -1.3 3,993,282 + -0.2 3,993,433 + DvMF_3167 0.20 -1.8 3,993,723 + DvMF_3167 0.52 -0.9 3,993,752 + DvMF_3167 0.56 -1.3 3,993,765 - DvMF_3167 0.57 -0.8 3,993,937 - DvMF_3167 0.77 -2.0 3,994,190 + -0.6 3,994,340 + DvMF_3168 0.20 -0.4 3,994,498 + DvMF_3168 0.37 -0.4 3,994,498 + DvMF_3168 0.37 -0.5 3,994,869 + DvMF_3168 0.78 -0.4 3,994,888 + DvMF_3168 0.80 -0.5 3,994,889 + DvMF_3168 0.80 -0.7 3,994,930 + DvMF_3168 0.84 -2.0 3,995,169 - -0.7 3,995,358 + +0.1 3,995,367 + -0.7 3,995,559 - -0.1 3,995,561 + -1.1 3,995,615 - -0.5 3,995,657 - -0.3 3,996,017 - -0.8
Or see this region's nucleotide sequence