Experiment: MoYLS4 with perchlorate 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2103 and DvMF_2104 are separated by 23 nucleotides DvMF_2104 and DvMF_2105 are separated by 77 nucleotides DvMF_2105 and DvMF_2106 are separated by 90 nucleotides DvMF_2106 and DvMF_2107 are separated by 283 nucleotides
DvMF_2103: DvMF_2103 - protein of unknown function DUF81 (RefSeq), at 2,621,609 to 2,622,667
_2103
DvMF_2104: DvMF_2104 - hypothetical protein (RefSeq), at 2,622,691 to 2,623,011
_2104
DvMF_2105: DvMF_2105 - hypothetical protein (RefSeq), at 2,623,089 to 2,623,646
_2105
DvMF_2106: DvMF_2106 - hypothetical protein (RefSeq), at 2,623,737 to 2,623,976
_2106
DvMF_2107: DvMF_2107 - response regulator receiver protein (RefSeq), at 2,624,260 to 2,626,566
_2107
Position (kb)
2623
2624 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2623.061 kb on - strand at 2623.106 kb on + strand at 2623.142 kb on + strand at 2623.170 kb on - strand, within DvMF_2105 at 2623.453 kb on + strand, within DvMF_2105 at 2623.707 kb on - strand at 2623.824 kb on + strand, within DvMF_2106 at 2623.912 kb on - strand, within DvMF_2106 at 2624.432 kb on + strand at 2624.432 kb on + strand at 2624.435 kb on - strand at 2624.442 kb on + strand at 2624.555 kb on + strand, within DvMF_2107 at 2624.562 kb on - strand, within DvMF_2107 at 2624.603 kb on + strand, within DvMF_2107 at 2624.624 kb on - strand, within DvMF_2107
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with perchlorate 12.5 mM remove 2,623,061 - -1.2 2,623,106 + +0.6 2,623,142 + +1.7 2,623,170 - DvMF_2105 0.15 +1.8 2,623,453 + DvMF_2105 0.65 -0.0 2,623,707 - +0.8 2,623,824 + DvMF_2106 0.36 -0.6 2,623,912 - DvMF_2106 0.73 +2.1 2,624,432 + +2.4 2,624,432 + +2.5 2,624,435 - +2.2 2,624,442 + +1.6 2,624,555 + DvMF_2107 0.13 +2.5 2,624,562 - DvMF_2107 0.13 +2.9 2,624,603 + DvMF_2107 0.15 +2.6 2,624,624 - DvMF_2107 0.16 +2.8
Or see this region's nucleotide sequence