Experiment: MoYLS4 with perchlorate 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2098 and DvMF_2099 are separated by 130 nucleotides DvMF_2099 and DvMF_2100 are separated by 506 nucleotides
DvMF_2098: DvMF_2098 - major facilitator superfamily MFS_1 (RefSeq), at 2,614,478 to 2,615,878
_2098
DvMF_2099: DvMF_2099 - glutamine synthetase, type I (RefSeq), at 2,616,009 to 2,617,352
_2099
DvMF_2100: DvMF_2100 - hypothetical protein (RefSeq), at 2,617,859 to 2,618,833
_2100
Position (kb)
2616
2617
2618 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2615.104 kb on + strand, within DvMF_2098 at 2615.137 kb on - strand, within DvMF_2098 at 2615.199 kb on + strand, within DvMF_2098 at 2615.505 kb on + strand, within DvMF_2098 at 2615.540 kb on - strand, within DvMF_2098 at 2615.570 kb on + strand, within DvMF_2098 at 2615.674 kb on + strand, within DvMF_2098 at 2615.682 kb on - strand, within DvMF_2098 at 2615.738 kb on - strand, within DvMF_2098 at 2615.805 kb on + strand at 2616.247 kb on - strand, within DvMF_2099 at 2616.252 kb on - strand, within DvMF_2099 at 2616.252 kb on - strand, within DvMF_2099 at 2616.432 kb on - strand, within DvMF_2099 at 2616.666 kb on + strand, within DvMF_2099 at 2616.715 kb on + strand, within DvMF_2099 at 2616.723 kb on - strand, within DvMF_2099 at 2616.735 kb on + strand, within DvMF_2099 at 2617.101 kb on + strand, within DvMF_2099 at 2617.248 kb on + strand at 2617.264 kb on + strand at 2617.274 kb on + strand at 2617.491 kb on + strand at 2617.607 kb on + strand at 2617.628 kb on + strand at 2617.631 kb on - strand at 2617.645 kb on - strand at 2617.685 kb on + strand at 2617.693 kb on - strand at 2617.797 kb on - strand at 2617.853 kb on - strand at 2617.855 kb on + strand at 2617.870 kb on - strand at 2617.877 kb on - strand at 2617.925 kb on - strand at 2618.182 kb on + strand, within DvMF_2100 at 2618.190 kb on - strand, within DvMF_2100
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with perchlorate 12.5 mM remove 2,615,104 + DvMF_2098 0.45 -1.5 2,615,137 - DvMF_2098 0.47 -1.0 2,615,199 + DvMF_2098 0.51 -0.9 2,615,505 + DvMF_2098 0.73 -0.8 2,615,540 - DvMF_2098 0.76 -0.3 2,615,570 + DvMF_2098 0.78 +0.3 2,615,674 + DvMF_2098 0.85 -1.5 2,615,682 - DvMF_2098 0.86 -0.6 2,615,738 - DvMF_2098 0.90 -0.8 2,615,805 + -0.9 2,616,247 - DvMF_2099 0.18 -2.3 2,616,252 - DvMF_2099 0.18 -2.0 2,616,252 - DvMF_2099 0.18 -1.7 2,616,432 - DvMF_2099 0.31 -3.1 2,616,666 + DvMF_2099 0.49 -0.2 2,616,715 + DvMF_2099 0.53 -1.5 2,616,723 - DvMF_2099 0.53 -1.4 2,616,735 + DvMF_2099 0.54 -4.2 2,617,101 + DvMF_2099 0.81 -2.0 2,617,248 + -1.8 2,617,264 + -2.5 2,617,274 + -2.9 2,617,491 + -0.4 2,617,607 + -1.2 2,617,628 + -0.5 2,617,631 - -0.5 2,617,645 - -0.5 2,617,685 + -0.2 2,617,693 - +0.3 2,617,797 - -0.6 2,617,853 - +0.2 2,617,855 + +0.1 2,617,870 - +0.1 2,617,877 - +0.1 2,617,925 - +1.2 2,618,182 + DvMF_2100 0.33 -0.3 2,618,190 - DvMF_2100 0.34 -0.4
Or see this region's nucleotide sequence