Experiment: MoYLS4 with perchlorate 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2026 and DvMF_2027 are separated by 222 nucleotides DvMF_2027 and DvMF_2028 are separated by 228 nucleotides
DvMF_2026: DvMF_2026 - Fmu (Sun) domain protein (RefSeq), at 2,510,451 to 2,511,794
_2026
DvMF_2027: DvMF_2027 - inositol monophosphatase (RefSeq), at 2,512,017 to 2,512,979
_2027
DvMF_2028: DvMF_2028 - NLP/P60 protein (RefSeq), at 2,513,208 to 2,513,909
_2028
Position (kb)
2512
2513 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2511.173 kb on - strand, within DvMF_2026 at 2511.275 kb on + strand, within DvMF_2026 at 2511.321 kb on + strand, within DvMF_2026 at 2511.538 kb on + strand, within DvMF_2026 at 2511.586 kb on + strand, within DvMF_2026 at 2511.680 kb on - strand at 2511.725 kb on + strand at 2511.796 kb on - strand at 2511.823 kb on - strand at 2511.905 kb on + strand at 2511.913 kb on - strand at 2511.913 kb on - strand at 2512.023 kb on - strand at 2512.438 kb on + strand, within DvMF_2027 at 2512.565 kb on + strand, within DvMF_2027 at 2512.741 kb on - strand, within DvMF_2027 at 2512.896 kb on + strand at 2512.950 kb on + strand at 2512.950 kb on - strand at 2512.952 kb on + strand at 2513.160 kb on - strand at 2513.247 kb on + strand at 2513.337 kb on + strand, within DvMF_2028 at 2513.405 kb on - strand, within DvMF_2028 at 2513.552 kb on + strand, within DvMF_2028 at 2513.580 kb on + strand, within DvMF_2028 at 2513.590 kb on + strand, within DvMF_2028 at 2513.634 kb on - strand, within DvMF_2028 at 2513.699 kb on - strand, within DvMF_2028 at 2513.747 kb on + strand, within DvMF_2028 at 2513.755 kb on - strand, within DvMF_2028 at 2513.788 kb on + strand, within DvMF_2028 at 2513.903 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with perchlorate 12.5 mM remove 2,511,173 - DvMF_2026 0.54 -0.6 2,511,275 + DvMF_2026 0.61 -1.8 2,511,321 + DvMF_2026 0.65 -1.7 2,511,538 + DvMF_2026 0.81 +0.5 2,511,586 + DvMF_2026 0.84 -1.1 2,511,680 - -0.4 2,511,725 + -0.2 2,511,796 - -0.4 2,511,823 - -0.7 2,511,905 + -0.3 2,511,913 - +0.5 2,511,913 - -0.6 2,512,023 - -1.2 2,512,438 + DvMF_2027 0.44 -0.6 2,512,565 + DvMF_2027 0.57 -1.1 2,512,741 - DvMF_2027 0.75 -1.1 2,512,896 + -0.3 2,512,950 + +0.5 2,512,950 - -0.4 2,512,952 + +3.2 2,513,160 - -1.2 2,513,247 + -0.9 2,513,337 + DvMF_2028 0.18 -0.3 2,513,405 - DvMF_2028 0.28 -0.3 2,513,552 + DvMF_2028 0.49 -0.4 2,513,580 + DvMF_2028 0.53 -0.2 2,513,590 + DvMF_2028 0.54 -0.2 2,513,634 - DvMF_2028 0.61 -0.5 2,513,699 - DvMF_2028 0.70 +0.2 2,513,747 + DvMF_2028 0.77 -0.2 2,513,755 - DvMF_2028 0.78 -1.6 2,513,788 + DvMF_2028 0.83 -1.2 2,513,903 + -0.2
Or see this region's nucleotide sequence