Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0374

Experiment: MoYLS4 with perchlorate 12.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0372 and DvMF_0373 are separated by 37 nucleotidesDvMF_0373 and engB are separated by 251 nucleotidesengB and DvMF_0375 are separated by 187 nucleotides DvMF_0372: DvMF_0372 - translation elongation factor P (RefSeq), at 439,453 to 440,010 _0372 DvMF_0373: DvMF_0373 - 3-dehydroquinate dehydratase (RefSeq), at 440,048 to 440,527 _0373 DvMF_0374: engB - ribosome biogenesis GTP-binding protein YsxC (RefSeq), at 440,779 to 441,543 engB DvMF_0375: DvMF_0375 - permease YjgP/YjgQ family protein (RefSeq), at 441,731 to 442,816 _0375 Position (kb) 440 441 442Strain fitness (log2 ratio) -1 0 1at 439.902 kb on + strand, within DvMF_0372at 441.637 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with perchlorate 12.5 mM
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439,902 + DvMF_0372 0.80 -1.3
441,637 + -0.2

Or see this region's nucleotide sequence