Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1116

Experiment: NAG (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpyrG and eno are separated by 213 nucleotideseno and Shewana3_1117 are separated by 100 nucleotidesShewana3_1117 and ispD are separated by 10 nucleotides Shewana3_1115: pyrG - CTP synthetase (RefSeq), at 1,313,897 to 1,315,537 pyrG Shewana3_1116: eno - phosphopyruvate hydratase (RefSeq), at 1,315,751 to 1,317,046 eno Shewana3_1117: Shewana3_1117 - cell division protein FtsB (RefSeq), at 1,317,147 to 1,317,446 _1117 Shewana3_1118: ispD - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (RefSeq), at 1,317,457 to 1,318,206 ispD Position (kb) 1315 1316 1317 1318Strain fitness (log2 ratio) -3 -2 -1 0 1at 1315.744 kb on + strandat 1317.103 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG (C)
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1,315,744 + -3.6
1,317,103 - -0.9

Or see this region's nucleotide sequence