Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1025

Experiment: NAG (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_1024 and Shewana3_1025 are separated by 74 nucleotidesShewana3_1025 and Shewana3_1026 are separated by 193 nucleotidesShewana3_1026 and secG are separated by 1 nucleotides Shewana3_1024: Shewana3_1024 - dihydropteroate synthase (RefSeq), at 1,196,220 to 1,197,053 _1024 Shewana3_1025: Shewana3_1025 - phosphoglucosamine mutase (RefSeq), at 1,197,128 to 1,198,465 _1025 Shewana3_1026: Shewana3_1026 - triosephosphate isomerase (RefSeq), at 1,198,659 to 1,199,441 _1026 Shewana3_1027: secG - preprotein translocase subunit SecG (RefSeq), at 1,199,443 to 1,199,775 secG Position (kb) 1197 1198 1199Strain fitness (log2 ratio) -1 0 1at 1196.200 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NAG (C)
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1,196,200 + +0.6

Or see this region's nucleotide sequence