Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4280

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
4,981,296	+		Pf6N2E2_4279	0.49	-2.1
4,981,481	+		Pf6N2E2_4279	0.59	-4.3
4,981,481	+		Pf6N2E2_4279	0.59	-4.0
4,981,481	+		Pf6N2E2_4279	0.59	-3.4
4,981,481	+		Pf6N2E2_4279	0.59	-3.5
4,981,481	+		Pf6N2E2_4279	0.59	-5.1
4,981,482	-		Pf6N2E2_4279	0.59	-3.2
4,981,511	+		Pf6N2E2_4279	0.61	-3.4
4,981,512	-		Pf6N2E2_4279	0.61	-3.0
4,981,512	-		Pf6N2E2_4279	0.61	-3.3
4,981,512	-		Pf6N2E2_4279	0.61	-2.0
4,981,688	+		Pf6N2E2_4279	0.71	-4.7
4,981,850	+		Pf6N2E2_4279	0.80	-4.3
4,981,904	+		Pf6N2E2_4279	0.83	-3.9
4,981,904	+		Pf6N2E2_4279	0.83	-3.2
4,981,904	+		Pf6N2E2_4279	0.83	-3.6
4,981,905	-		Pf6N2E2_4279	0.83	-2.9
4,981,905	-		Pf6N2E2_4279	0.83	-3.0
4,981,905	-		Pf6N2E2_4279	0.83	-4.2
4,981,905	-		Pf6N2E2_4279	0.83	-3.8
4,981,905	-		Pf6N2E2_4279	0.83	-3.5
4,981,905	-		Pf6N2E2_4279	0.83	-2.9
4,982,218	+				-2.5
4,982,219	-				-2.5
4,982,219	-				-0.6
4,982,230	+				+0.2
4,982,231	-				-2.2
4,982,240	+				+0.9
4,982,347	+				+0.7
4,982,347	+				+1.1
4,982,347	+				+0.0
4,982,347	+				+0.6
4,982,347	+				-0.2
4,982,347	+				+2.5
4,982,348	-				+0.7
4,982,348	-				-0.2
4,982,348	-				-1.0
4,982,348	-				+1.1
4,982,348	-				-0.5
4,982,348	-				-0.9
4,982,348	-				-0.2
4,982,348	-				+0.9
4,982,348	-				+1.0
4,982,348	-				-1.2
4,982,442	-				-1.2
4,982,443	+				-1.0
4,982,443	+				+0.4
4,982,443	+				-0.1
4,982,443	+				-0.5
4,982,443	+				+0.8
4,982,443	+				-0.4
4,982,443	+				-0.6
4,982,444	-				+0.8
4,982,444	-				-3.0
4,982,444	-				-0.6
4,982,444	-				-1.4
4,982,444	-				+0.6
4,982,444	-				-0.2
4,982,444	-				+0.8
4,982,444	-				-0.2
4,982,444	-				-0.2
4,982,497	+		Pf6N2E2_4280	0.11	+0.3
4,982,497	+		Pf6N2E2_4280	0.11	+0.1
4,982,498	-		Pf6N2E2_4280	0.12	-0.7
4,982,593	+		Pf6N2E2_4280	0.17	+1.0
4,982,593	+		Pf6N2E2_4280	0.17	-0.2
4,982,594	-		Pf6N2E2_4280	0.17	+0.1
4,982,665	+		Pf6N2E2_4280	0.20	-0.3
4,982,665	+		Pf6N2E2_4280	0.20	-0.3
4,982,836	+		Pf6N2E2_4280	0.29	-0.7
4,982,853	+		Pf6N2E2_4280	0.30	+0.6
4,982,884	+		Pf6N2E2_4280	0.32	+1.0
4,982,884	+		Pf6N2E2_4280	0.32	-0.2
4,982,968	-		Pf6N2E2_4280	0.36	+0.4
4,983,392	+		Pf6N2E2_4280	0.59	+0.8
4,983,392	+		Pf6N2E2_4280	0.59	-0.3
4,983,392	+		Pf6N2E2_4280	0.59	-1.3
4,983,392	+		Pf6N2E2_4280	0.59	-0.2
4,983,392	+		Pf6N2E2_4280	0.59	-1.8
4,983,392	+		Pf6N2E2_4280	0.59	+0.1
4,983,393	-		Pf6N2E2_4280	0.59	-1.3
4,983,393	-		Pf6N2E2_4280	0.59	-0.3
4,983,393	-		Pf6N2E2_4280	0.59	+0.3
4,983,393	-		Pf6N2E2_4280	0.59	-0.2
4,983,393	-		Pf6N2E2_4280	0.59	-1.1
4,983,393	-		Pf6N2E2_4280	0.59	+0.5
4,983,533	-		Pf6N2E2_4280	0.66	-1.3
4,983,559	+		Pf6N2E2_4280	0.68	-0.9
4,983,559	+		Pf6N2E2_4280	0.68	-0.4
4,983,673	-		Pf6N2E2_4280	0.74	-0.2
4,983,760	+		Pf6N2E2_4280	0.78	+0.3
4,983,760	+		Pf6N2E2_4280	0.78	+0.9
4,983,760	+		Pf6N2E2_4280	0.78	-0.4
4,983,761	-		Pf6N2E2_4280	0.78	+0.3
4,983,761	-		Pf6N2E2_4280	0.78	+0.5
4,983,861	+		Pf6N2E2_4280	0.84	-0.5
4,983,861	+		Pf6N2E2_4280	0.84	+1.9
4,983,861	+		Pf6N2E2_4280	0.84	-0.7
4,983,862	-		Pf6N2E2_4280	0.84	+0.4
4,983,897	+		Pf6N2E2_4280	0.85	-0.4
4,983,897	+		Pf6N2E2_4280	0.85	+0.3
4,983,897	+		Pf6N2E2_4280	0.85	+1.1
4,983,897	+		Pf6N2E2_4280	0.85	-0.4
4,983,898	-		Pf6N2E2_4280	0.85	+0.1
4,983,898	-		Pf6N2E2_4280	0.85	+1.6
4,983,898	-		Pf6N2E2_4280	0.85	-0.9
4,983,898	-		Pf6N2E2_4280	0.85	-0.6
4,984,447	+				-0.7
4,984,449	+				+1.7
4,984,449	+				+0.8
4,984,449	+				+0.7
4,984,449	+				+0.1
4,984,449	+				+1.1
4,984,449	+				+0.0
4,984,449	+				-1.5
4,984,449	+				+0.2
4,984,449	+				+1.1
4,984,449	+				-2.1
4,984,449	+				+0.0
4,984,449	+				-1.0
4,984,449	+				-1.9
4,984,449	+				-0.2
4,984,449	+				+1.1
4,984,449	+				-1.9
4,984,449	+				+0.4
4,984,449	+				-0.1
4,984,449	+				+1.4
4,984,449	+				-0.2
4,984,450	-				+0.0
4,984,450	-				-1.4
4,984,450	-				+1.0
4,984,450	-				-0.1
4,984,450	-				-1.1
4,984,450	-				-0.2
4,984,450	-				+0.1
4,984,450	-				+0.0
4,984,450	-				-0.8
4,984,450	-				+4.5
4,984,450	-				-0.1
4,984,450	-				-0.4
4,984,450	-				+1.1
4,984,450	-				-1.7
4,984,450	-				+0.2
4,984,460	+				+0.0
4,984,460	+				+0.3
4,984,460	+				-1.2
4,984,596	+				-2.6
4,984,596	+				-0.4
4,984,635	-				+0.8
4,984,635	-				-2.3
4,984,692	+				+1.9
4,984,692	+				-0.4
4,984,693	-				+0.6
4,984,693	-				+0.2
4,984,693	-				+0.5
4,984,693	-				+0.9
4,984,758	+		Pf6N2E2_4281	0.10	+0.1
4,984,758	+		Pf6N2E2_4281	0.10	+0.3
4,984,758	+		Pf6N2E2_4281	0.10	-0.3
4,984,758	+		Pf6N2E2_4281	0.10	-0.8
4,984,758	+		Pf6N2E2_4281	0.10	+0.5
4,984,758	+		Pf6N2E2_4281	0.10	+0.8
4,984,758	+		Pf6N2E2_4281	0.10	+0.2
4,984,758	+		Pf6N2E2_4281	0.10	+1.2
4,984,759	-		Pf6N2E2_4281	0.10	+0.5
4,984,759	-		Pf6N2E2_4281	0.10	-0.1
4,984,759	-		Pf6N2E2_4281	0.10	-0.5
4,984,759	-		Pf6N2E2_4281	0.10	+0.2
4,984,759	-		Pf6N2E2_4281	0.10	-0.6
4,984,762	+		Pf6N2E2_4281	0.11	+1.4
4,984,762	+		Pf6N2E2_4281	0.11	+1.2
4,984,763	-		Pf6N2E2_4281	0.11	+0.2
4,984,763	-		Pf6N2E2_4281	0.11	-0.3
4,984,763	-		Pf6N2E2_4281	0.11	+0.3
4,984,790	-		Pf6N2E2_4281	0.14	-0.8
4,984,791	+		Pf6N2E2_4281	0.14	+0.4
4,984,791	+		Pf6N2E2_4281	0.14	+0.8
4,984,791	+		Pf6N2E2_4281	0.14	+0.6
4,984,791	+		Pf6N2E2_4281	0.14	+1.5
4,984,791	+		Pf6N2E2_4281	0.14	+0.4
4,984,792	-		Pf6N2E2_4281	0.15	-1.8
4,984,792	-		Pf6N2E2_4281	0.15	+0.7
4,984,792	-		Pf6N2E2_4281	0.15	+0.2
4,984,792	-		Pf6N2E2_4281	0.15	-0.2
4,984,792	-		Pf6N2E2_4281	0.15	+1.3
4,984,792	-		Pf6N2E2_4281	0.15	+0.4
4,984,792	-		Pf6N2E2_4281	0.15	+1.0
4,984,792	-		Pf6N2E2_4281	0.15	+0.6
4,984,792	-		Pf6N2E2_4281	0.15	-0.1
4,984,792	-		Pf6N2E2_4281	0.15	-0.2
4,984,792	-		Pf6N2E2_4281	0.15	+1.2
4,984,792	-		Pf6N2E2_4281	0.15	+0.1
4,984,798	-		Pf6N2E2_4281	0.15	+0.8
4,984,812	+		Pf6N2E2_4281	0.17	+0.3
4,984,813	-		Pf6N2E2_4281	0.17	-0.5
4,984,813	-		Pf6N2E2_4281	0.17	+0.3
4,985,040	+		Pf6N2E2_4281	0.46	+1.5
4,985,049	+		Pf6N2E2_4281	0.47	+0.6
4,985,049	+		Pf6N2E2_4281	0.47	+0.1
4,985,049	+		Pf6N2E2_4281	0.47	-0.6
4,985,049	+		Pf6N2E2_4281	0.47	+0.7
4,985,050	-		Pf6N2E2_4281	0.47	-0.6
4,985,050	-		Pf6N2E2_4281	0.47	-0.4
4,985,121	+		Pf6N2E2_4281	0.56	+1.0
4,985,121	+		Pf6N2E2_4281	0.56	+0.4
4,985,122	-		Pf6N2E2_4281	0.56	+0.3
4,985,122	-		Pf6N2E2_4281	0.56	+0.6