Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2016

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
2,401,010	-				+1.0
2,401,026	+				-0.1
2,401,026	+				-0.7
2,401,026	+				-1.0
2,401,027	-				+2.5
2,401,027	-				+1.5
2,401,027	-				-0.3
2,401,027	-				-0.2
2,401,027	-				+0.4
2,401,027	-				+0.7
2,401,027	-				-0.9
2,401,027	-				-0.6
2,401,031	-				-1.1
2,401,137	-				+1.2
2,401,219	-				-0.4
2,401,219	-				+0.6
2,401,223	-				+0.4
2,401,245	-				-0.1
2,401,245	-				-0.7
2,401,359	-				+0.4
2,401,407	+				+0.9
2,401,408	-				+0.4
2,401,408	-				+1.4
2,401,408	-				-0.8
2,401,441	+				-0.1
2,401,442	-				-1.2
2,401,442	-				-0.6
2,401,442	-				-0.5
2,401,442	-				-0.9
2,401,442	-				-0.6
2,401,442	-				-1.9
2,401,451	+				+0.8
2,401,453	+				+0.6
2,401,453	+				-2.2
2,401,454	-				+0.2
2,401,454	-				+0.3
2,401,454	-				-0.1
2,401,454	-				-0.6
2,401,454	-				+1.4
2,401,454	-				+1.0
2,401,454	-				-1.1
2,401,454	-				-0.5
2,401,454	-				-1.3
2,401,454	-				-1.7
2,401,454	-				-0.8
2,401,454	-				+1.4
2,401,454	-				+0.4
2,401,454	-				+1.6
2,401,454	-				+0.3
2,401,454	-				+1.5
2,401,454	-				-0.1
2,401,525	-				-1.8
2,401,525	-				-1.2
2,401,525	-				-0.4
2,401,525	-				-0.1
2,401,525	-				+0.4
2,401,525	-				-0.9
2,401,525	-				-2.3
2,401,528	+				-3.5
2,401,528	+				+1.6
2,401,528	+				-1.6
2,401,529	-				+0.5
2,401,529	-				-1.5
2,401,529	-				+1.4
2,401,529	-				+1.0
2,401,529	-				-0.7
2,401,529	-				+0.9
2,401,538	-				-3.2
2,401,675	+				+0.9
2,401,675	+				+1.4
2,401,676	-				+0.7
2,401,676	-				+1.5
2,401,676	-				-0.0
2,401,717	-				+0.4
2,401,717	-				-0.6
2,401,717	-				-1.5
2,401,764	-				+0.8
2,401,791	+				-3.4
2,401,804	+				+1.5
2,401,874	-				+1.2
2,402,017	+				-0.3
2,402,017	+				-1.0
2,402,017	+				+0.5
2,402,017	+				-2.4
2,402,018	-				-0.7
2,402,018	-				-0.6
2,402,018	-				+1.7
2,402,019	+				+0.0
2,402,019	+				+1.1
2,402,019	+				-0.1
2,402,019	+				+0.4
2,402,019	+				+0.3
2,402,019	+				-0.3
2,402,019	+				-1.4
2,402,020	-				+0.5
2,402,020	-				+1.3
2,402,020	-				+0.5
2,402,020	-				-0.8
2,402,020	-				+1.0
2,402,020	-				+1.4
2,402,020	-				-0.1
2,402,020	-				+1.1
2,402,020	-				+0.1
2,402,020	-				-3.1
2,402,020	-				-0.5
2,402,020	-				+0.8
2,402,066	+				+2.3
2,402,066	+				-1.0
2,402,067	-				+0.4
2,402,067	-				-0.3
2,402,067	-				-0.5
2,402,133	+				+0.5
2,402,134	-				+0.0
2,402,134	-				+0.3
2,402,145	-				-1.0
2,402,249	-		Pf6N2E2_2016	0.12	+0.8
2,402,279	+		Pf6N2E2_2016	0.14	-1.1
2,402,305	+		Pf6N2E2_2016	0.15	-0.7
2,402,305	+		Pf6N2E2_2016	0.15	-0.2
2,402,305	+		Pf6N2E2_2016	0.15	-1.1
2,402,306	-		Pf6N2E2_2016	0.15	-0.9
2,402,306	-		Pf6N2E2_2016	0.15	+0.3
2,402,309	+		Pf6N2E2_2016	0.15	-1.4
2,402,309	+		Pf6N2E2_2016	0.15	-0.4
2,402,310	-		Pf6N2E2_2016	0.15	+0.2
2,402,310	-		Pf6N2E2_2016	0.15	+0.3
2,402,340	+		Pf6N2E2_2016	0.17	-1.7
2,402,341	-		Pf6N2E2_2016	0.17	-0.4
2,402,341	-		Pf6N2E2_2016	0.17	+2.5
2,402,341	-		Pf6N2E2_2016	0.17	-0.1
2,402,341	-		Pf6N2E2_2016	0.17	+0.3
2,402,396	+		Pf6N2E2_2016	0.20	-0.1
2,402,397	-		Pf6N2E2_2016	0.20	+1.7
2,402,517	-		Pf6N2E2_2016	0.26	-0.0
2,402,531	-		Pf6N2E2_2016	0.26	-0.8
2,402,531	-		Pf6N2E2_2016	0.26	-0.8
2,402,548	-		Pf6N2E2_2016	0.27	-0.3
2,402,548	-		Pf6N2E2_2016	0.27	-0.5
2,402,548	-		Pf6N2E2_2016	0.27	+0.1
2,402,548	-		Pf6N2E2_2016	0.27	+0.3
2,402,594	+		Pf6N2E2_2016	0.29	-1.7
2,402,595	-		Pf6N2E2_2016	0.29	+0.8
2,402,645	-		Pf6N2E2_2016	0.32	+0.1
2,402,645	-		Pf6N2E2_2016	0.32	-2.7
2,402,647	+		Pf6N2E2_2016	0.32	-2.1
2,402,648	-		Pf6N2E2_2016	0.32	+0.2
2,402,648	-		Pf6N2E2_2016	0.32	-0.4
2,402,721	+		Pf6N2E2_2016	0.36	+1.0
2,402,819	+		Pf6N2E2_2016	0.40	-1.3
2,402,819	+		Pf6N2E2_2016	0.40	-2.1
2,402,819	+		Pf6N2E2_2016	0.40	+0.2
2,402,820	-		Pf6N2E2_2016	0.40	+1.0
2,402,869	+		Pf6N2E2_2016	0.43	-0.8
2,402,869	+		Pf6N2E2_2016	0.43	-2.0
2,402,870	-		Pf6N2E2_2016	0.43	-1.7
2,402,921	+		Pf6N2E2_2016	0.45	-1.0
2,402,938	+		Pf6N2E2_2016	0.46	-1.7
2,402,938	+		Pf6N2E2_2016	0.46	-2.0
2,402,939	-		Pf6N2E2_2016	0.46	-0.1
2,402,939	-		Pf6N2E2_2016	0.46	+0.3
2,402,942	-		Pf6N2E2_2016	0.46	+0.7
2,402,969	-		Pf6N2E2_2016	0.48	+1.3
2,402,971	+		Pf6N2E2_2016	0.48	+0.7
2,402,972	-		Pf6N2E2_2016	0.48	+1.2
2,403,020	+		Pf6N2E2_2016	0.50	-0.1
2,403,021	-		Pf6N2E2_2016	0.50	+0.5
2,403,022	+		Pf6N2E2_2016	0.50	-0.5
2,403,023	-		Pf6N2E2_2016	0.50	-0.4
2,403,035	-		Pf6N2E2_2016	0.51	+0.2
2,403,267	-		Pf6N2E2_2016	0.62	-0.7
2,403,344	+		Pf6N2E2_2016	0.66	-0.1
2,403,345	-		Pf6N2E2_2016	0.66	+1.7
2,403,400	+		Pf6N2E2_2016	0.69	-0.4
2,403,400	+		Pf6N2E2_2016	0.69	+0.3
2,403,418	+		Pf6N2E2_2016	0.70	+0.8
2,403,421	+		Pf6N2E2_2016	0.70	-0.2
2,403,422	-		Pf6N2E2_2016	0.70	+1.6
2,403,422	-		Pf6N2E2_2016	0.70	-0.5
2,403,545	+		Pf6N2E2_2016	0.76	-2.4
2,403,545	+		Pf6N2E2_2016	0.76	-0.9
2,403,546	-		Pf6N2E2_2016	0.76	-2.1
2,403,546	-		Pf6N2E2_2016	0.76	+0.5
2,403,675	-		Pf6N2E2_2016	0.82	-0.4
2,403,675	-		Pf6N2E2_2016	0.82	-2.2
2,403,703	+		Pf6N2E2_2016	0.84	-1.2
2,403,710	+		Pf6N2E2_2016	0.84	+0.0
2,403,710	+		Pf6N2E2_2016	0.84	-0.7
2,403,710	+		Pf6N2E2_2016	0.84	-1.3
2,403,711	-		Pf6N2E2_2016	0.84	-2.1
2,403,711	-		Pf6N2E2_2016	0.84	+0.1
2,403,711	-		Pf6N2E2_2016	0.84	-1.4
2,403,711	-		Pf6N2E2_2016	0.84	+0.4
2,403,711	-		Pf6N2E2_2016	0.84	-2.7
2,403,711	-		Pf6N2E2_2016	0.84	-0.5
2,403,724	+		Pf6N2E2_2016	0.85	+0.2
2,403,730	+		Pf6N2E2_2016	0.85	-0.3
2,403,730	+		Pf6N2E2_2016	0.85	+1.4
2,403,730	+		Pf6N2E2_2016	0.85	-0.7
2,403,731	-		Pf6N2E2_2016	0.85	-0.4
2,403,731	-		Pf6N2E2_2016	0.85	+1.1
2,403,731	-		Pf6N2E2_2016	0.85	-0.6
2,403,731	-		Pf6N2E2_2016	0.85	-0.3
2,403,731	-		Pf6N2E2_2016	0.85	+0.5
2,403,731	-		Pf6N2E2_2016	0.85	-0.4
2,403,812	-		Pf6N2E2_2016	0.89	-0.7
2,404,014	+				-0.3
2,404,014	+				+0.9
2,404,014	+				-0.4
2,404,014	+				+0.0
2,404,014	+				+1.2
2,404,014	+				+0.0
2,404,014	+				+0.6
2,404,014	+				-0.8
2,404,015	-				-0.8
2,404,015	-				+2.2
2,404,015	-				+0.0
2,404,015	-				-0.4
2,404,015	-				-0.3
2,404,015	-				+2.1
2,404,041	+				-1.8
2,404,045	+				+0.2
2,404,045	+				-1.6
2,404,046	-				+2.1
2,404,046	-				-0.6
2,404,046	-				-0.4
2,404,064	+				+0.5
2,404,065	-				-0.9
2,404,140	+				-0.6
2,404,140	+				+0.2
2,404,140	+				+0.3
2,404,141	-				+0.2
2,404,141	-				+0.3
2,404,141	-				-1.1
2,404,141	-				-0.3
2,404,141	-				-0.8
2,404,141	-				+0.7
2,404,144	+				+0.6
2,404,144	+				+1.4
2,404,145	-				+0.3
2,404,145	-				+0.1
2,404,271	+		Pf6N2E2_2017	0.25	-0.2
2,404,449	+		Pf6N2E2_2017	0.88	-0.4
2,404,450	-		Pf6N2E2_2017	0.88	+0.8
2,404,474	+				-0.8
2,404,485	+				-1.0
2,404,485	+				+0.6
2,404,486	-				-0.6
2,404,486	-				+0.1
2,404,570	+		Pf6N2E2_2018	0.59	+0.1
2,404,571	-		Pf6N2E2_2018	0.59	+0.0
2,404,630	+				+0.4
2,404,631	-				-1.7
2,404,631	-				+1.9
2,404,654	+				+0.2
2,404,654	+				+0.5
2,404,654	+				+1.1
2,404,654	+				-0.9
2,404,654	+				-2.6
2,404,654	+				-1.7
2,404,655	-				+0.4
2,404,665	+				+0.3
2,404,665	+				+2.2
2,404,665	+				-1.0
2,404,665	+				-0.2
2,404,666	-				-1.4
2,404,695	-				-1.4
2,404,695	-				+0.3
2,404,695	-				+1.7
2,404,701	+				-0.7
2,404,702	-				+0.3
2,404,702	-				+1.0
2,404,732	-				+0.2
2,404,770	+				+1.2
2,404,770	+				-0.0
2,404,770	+				-0.4
2,404,861	+				-1.2
2,404,861	+				-1.3
2,404,861	+				+0.1
2,404,862	-				-0.2
2,404,862	-				-2.3
2,404,862	-				-0.1
2,404,867	+				-0.6
2,404,867	+				+0.9
2,404,868	-				-2.4
2,404,868	-				+0.6
2,404,924	+				-0.1
2,404,924	+				+1.5
2,404,925	-				+0.1
2,404,928	+				-0.5
2,404,928	+				-1.2
2,404,928	+				+0.2
2,404,929	-				+0.0
2,404,929	-				+0.6
2,404,976	+				-0.3
2,404,976	+				-1.7
2,404,977	-				-0.3