Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15205

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
3,824,777	-		CA265_RS15195	0.37	+2.5
3,824,879	+		CA265_RS15195	0.52	+1.3
3,824,913	-		CA265_RS15195	0.58	+2.0
3,824,913	-		CA265_RS15195	0.58	+1.9
3,824,913	-		CA265_RS15195	0.58	+2.1
3,824,916	+		CA265_RS15195	0.58	+0.6
3,825,031	+		CA265_RS15195	0.75	+2.9
3,825,032	-		CA265_RS15195	0.76	+3.3
3,825,060	-		CA265_RS15195	0.80	+2.5
3,825,071	-		CA265_RS15195	0.82	+2.5
3,825,084	-		CA265_RS15195	0.84	+2.7
3,825,100	+		CA265_RS15195	0.86	+0.4
3,825,101	-		CA265_RS15195	0.86	+3.1
3,825,108	-		CA265_RS15195	0.87	+2.9
3,825,139	-				+2.3
3,825,169	+				+0.3
3,825,169	+				+0.2
3,825,222	+				+2.9
3,825,318	+		CA265_RS15200	0.27	+2.8
3,825,319	-		CA265_RS15200	0.28	+3.2
3,825,319	-		CA265_RS15200	0.28	+3.0
3,825,353	+		CA265_RS15200	0.35	+2.9
3,825,361	+		CA265_RS15200	0.37	+3.6
3,825,604	-				+3.5
3,825,659	+				+0.5
3,825,660	-				+0.8
3,825,660	-				+0.6
3,825,676	-				+0.8
3,825,768	-				+0.5
3,825,781	+				-0.7
3,825,781	+				-0.3
3,825,798	+				-0.8
3,825,805	-				-1.2
3,825,857	+				+0.7
3,825,857	+				+0.5
3,825,915	+		CA265_RS15205	0.13	+0.2
3,825,917	+		CA265_RS15205	0.13	-0.3
3,825,918	-		CA265_RS15205	0.13	-0.5
3,825,942	+		CA265_RS15205	0.15	-0.5
3,825,943	-		CA265_RS15205	0.15	-0.3
3,826,092	-		CA265_RS15205	0.28	+0.1
3,826,110	+		CA265_RS15205	0.30	-0.8
3,826,118	+		CA265_RS15205	0.31	-0.7
3,826,122	-		CA265_RS15205	0.31	+0.0
3,826,193	-		CA265_RS15205	0.37	-0.2
3,826,234	+		CA265_RS15205	0.41	-2.0
3,826,271	-		CA265_RS15205	0.44	-0.0
3,826,289	-		CA265_RS15205	0.46	-0.1
3,826,308	+		CA265_RS15205	0.47	-0.1
3,826,309	-		CA265_RS15205	0.48	-0.4
3,826,309	-		CA265_RS15205	0.48	+0.1
3,826,311	-		CA265_RS15205	0.48	-0.8
3,826,426	+		CA265_RS15205	0.58	-0.3
3,826,521	-		CA265_RS15205	0.66	-0.7
3,826,591	+		CA265_RS15205	0.72	+0.3
3,826,591	+		CA265_RS15205	0.72	-0.6
3,826,592	-		CA265_RS15205	0.72	-0.4
3,826,771	+		CA265_RS15205	0.88	-0.9
3,826,772	-		CA265_RS15205	0.88	-1.2
3,826,830	-				-0.3
3,826,879	+				-0.6
3,826,964	+				+0.7
3,826,964	+				+0.6
3,826,965	-				+0.3
3,827,020	-				+0.6
3,827,031	+		CA265_RS15210	0.11	+0.6
3,827,032	-		CA265_RS15210	0.11	+0.8
3,827,076	-		CA265_RS15210	0.18	+1.4
3,827,082	-		CA265_RS15210	0.18	-0.1
3,827,153	+		CA265_RS15210	0.29	+0.5
3,827,223	+		CA265_RS15210	0.39	+0.5
3,827,251	+		CA265_RS15210	0.43	+1.3
3,827,292	+		CA265_RS15210	0.49	+1.4
3,827,349	+		CA265_RS15210	0.58	+0.4
3,827,508	-		CA265_RS15210	0.81	+0.8
3,827,625	+				+0.8
3,827,687	+				+0.1
3,827,705	-				+0.8
3,827,746	-				-0.0
3,827,797	-				+1.3
3,827,811	-				+1.1
3,827,858	-				+0.1