Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13260

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
3,293,305	-		CA265_RS13255	0.62	-0.3
3,293,326	-		CA265_RS13255	0.64	+0.2
3,293,326	-		CA265_RS13255	0.64	+0.2
3,293,326	-		CA265_RS13255	0.64	+0.0
3,293,326	-		CA265_RS13255	0.64	+0.1
3,293,393	-				-0.8
3,293,557	-		CA265_RS13255	0.85	-0.3
3,293,607	-		CA265_RS13255	0.89	+0.7
3,293,615	-				-0.8
3,293,679	-				+0.0
3,293,772	+				+0.4
3,293,772	+				-0.4
3,293,778	+				+0.1
3,293,779	-				+0.6
3,293,782	+				+0.8
3,293,791	+				+0.6
3,293,843	+				-0.7
3,293,894	+				-1.0
3,293,947	-				-0.4
3,294,045	+				+0.0
3,294,046	-				-0.2
3,294,127	+				+0.3
3,294,128	-				-0.3
3,294,139	-				+0.1
3,294,159	-				+0.7
3,294,188	+				+0.5
3,294,192	+				+0.5
3,294,197	+				+0.3
3,294,198	-				+0.6
3,294,257	+				+1.1
3,294,261	+				-0.4
3,294,261	+				+0.2
3,294,268	+				+0.5
3,294,288	+				+0.5
3,294,289	-				+0.3
3,294,422	+				+0.3
3,294,551	+		CA265_RS13260	0.14	-0.2
3,294,615	+		CA265_RS13260	0.17	+1.2
3,294,615	+		CA265_RS13260	0.17	+0.1
3,294,637	+		CA265_RS13260	0.19	+0.1
3,294,641	+		CA265_RS13260	0.19	+0.6
3,294,642	-		CA265_RS13260	0.19	-0.2
3,294,642	-		CA265_RS13260	0.19	+1.0
3,294,650	+		CA265_RS13260	0.19	+0.5
3,294,666	+		CA265_RS13260	0.20	+0.3
3,294,685	+		CA265_RS13260	0.21	-0.2
3,294,740	+		CA265_RS13260	0.24	+0.4
3,294,740	+		CA265_RS13260	0.24	+2.4
3,294,741	-		CA265_RS13260	0.25	+0.6
3,294,741	-		CA265_RS13260	0.25	+0.2
3,294,741	-		CA265_RS13260	0.25	-0.1
3,294,758	-		CA265_RS13260	0.25	+0.8
3,294,761	+		CA265_RS13260	0.26	+0.8
3,294,761	+		CA265_RS13260	0.26	+0.3
3,294,762	-		CA265_RS13260	0.26	-0.0
3,294,770	-		CA265_RS13260	0.26	-1.5
3,294,784	-		CA265_RS13260	0.27	-0.0
3,294,789	+		CA265_RS13260	0.27	+0.3
3,294,794	-		CA265_RS13260	0.27	-0.6
3,294,794	-		CA265_RS13260	0.27	+0.2
3,294,796	+		CA265_RS13260	0.28	+0.6
3,294,816	+		CA265_RS13260	0.29	+0.5
3,294,837	-		CA265_RS13260	0.30	-0.0
3,294,875	+		CA265_RS13260	0.32	+0.5
3,294,876	-		CA265_RS13260	0.32	+1.5
3,294,882	+		CA265_RS13260	0.32	+0.2
3,295,002	-		CA265_RS13260	0.39	+0.1
3,295,003	+		CA265_RS13260	0.39	-0.0
3,295,082	+		CA265_RS13260	0.44	+0.5
3,295,130	+		CA265_RS13260	0.46	+0.2
3,295,130	+		CA265_RS13260	0.46	-0.5
3,295,131	-		CA265_RS13260	0.46	+0.5
3,295,133	-		CA265_RS13260	0.46	+0.2
3,295,133	-		CA265_RS13260	0.46	+0.8
3,295,162	+		CA265_RS13260	0.48	-0.1
3,295,241	-		CA265_RS13260	0.52	+0.7
3,295,293	+		CA265_RS13260	0.55	+0.4
3,295,375	+		CA265_RS13260	0.60	+0.3
3,295,426	+		CA265_RS13260	0.63	-0.4
3,295,451	-		CA265_RS13260	0.64	+1.0
3,295,505	+		CA265_RS13260	0.67	+1.6
3,295,505	+		CA265_RS13260	0.67	+1.2
3,295,505	+		CA265_RS13260	0.67	+1.1
3,295,505	-		CA265_RS13260	0.67	+1.2
3,295,506	-		CA265_RS13260	0.67	+0.4
3,295,531	+		CA265_RS13260	0.69	+0.1
3,295,549	+		CA265_RS13260	0.70	+0.8
3,295,627	-		CA265_RS13260	0.74	-0.1
3,295,678	+		CA265_RS13260	0.77	+1.5
3,295,678	+		CA265_RS13260	0.77	+1.5
3,295,679	-		CA265_RS13260	0.77	-0.2
3,295,705	+		CA265_RS13260	0.78	+0.4
3,295,706	-		CA265_RS13260	0.78	-0.9
3,295,711	+		CA265_RS13260	0.79	+0.8
3,295,761	+		CA265_RS13260	0.81	+0.5
3,295,834	-		CA265_RS13260	0.86	-0.1
3,295,921	+				+2.2
3,295,921	+				+2.6
3,295,922	-				+0.1
3,295,949	+				+2.6
3,295,964	-				+0.2
3,296,020	-				-0.6
3,296,023	+				+1.2
3,296,023	+				+1.3
3,296,091	-				-0.7
3,296,109	-				-0.6
3,296,133	+				-0.6
3,296,135	+				+0.6
3,296,164	+				-1.1
3,296,241	+		CA265_RS13265	0.21	-1.1
3,296,262	-		CA265_RS13265	0.28	-0.5
3,296,264	+		CA265_RS13265	0.28	-0.3
3,296,278	-		CA265_RS13265	0.33	+0.1
3,296,348	-		CA265_RS13265	0.54	-0.6
3,296,443	-		CA265_RS13265	0.84	-1.3
3,296,557	-				-1.2
3,296,558	+				-1.0
3,296,559	-				-0.5
3,296,559	-				-0.2
3,296,579	+				-0.4
3,296,631	-		CA265_RS13270	0.14	-0.2
3,296,637	+		CA265_RS13270	0.15	+0.2
3,296,638	+		CA265_RS13270	0.15	+0.4
3,296,790	+		CA265_RS13270	0.48	-0.1
3,296,797	+		CA265_RS13270	0.49	+1.5
3,296,835	-		CA265_RS13270	0.58	+0.6
3,296,891	+		CA265_RS13270	0.70	-0.4
3,296,948	-		CA265_RS13270	0.82	-0.7
3,296,954	-		CA265_RS13270	0.83	-0.8
3,296,954	-		CA265_RS13270	0.83	-0.7
3,297,033	+				-2.0
3,297,034	-				-0.1
3,297,034	-				-0.3
3,297,034	-				-0.5
3,297,043	+				+0.4
3,297,053	+				+0.5
3,297,064	-				-0.1
3,297,069	-				+0.2
3,297,069	-				+0.2
3,297,084	+				+0.6
3,297,085	-				+0.9