Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09715

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
2,393,307	-				+0.6
2,393,307	-				-0.3
2,393,307	-				-0.4
2,393,307	-				+0.4
2,393,317	+				+0.4
2,393,317	+				-0.1
2,393,318	-				-0.2
2,393,318	-				+1.6
2,393,415	-		CA265_RS09705	0.28	+2.0
2,393,510	-		CA265_RS09705	0.50	+0.4
2,393,640	-		CA265_RS09705	0.81	+0.3
2,393,642	-		CA265_RS09705	0.82	+0.1
2,393,797	-				-0.5
2,393,797	-				+0.1
2,393,806	+				-0.1
2,393,806	+				-0.3
2,394,482	+		CA265_RS09715	0.23	+0.2
2,394,494	+		CA265_RS09715	0.24	+0.0
2,394,673	-		CA265_RS09715	0.44	+2.3
2,394,718	-		CA265_RS09715	0.49	+0.5
2,394,801	+		CA265_RS09715	0.59	+0.6
2,394,801	+		CA265_RS09715	0.59	+0.1
2,394,805	+		CA265_RS09715	0.59	+0.2
2,394,873	+		CA265_RS09715	0.67	+1.1
2,394,874	-		CA265_RS09715	0.67	+0.8
2,394,890	+		CA265_RS09715	0.69	+0.7
2,394,891	-		CA265_RS09715	0.69	+0.9
2,394,891	-		CA265_RS09715	0.69	+1.0
2,394,925	+		CA265_RS09715	0.73	+2.3
2,394,926	-		CA265_RS09715	0.73	+0.5
2,394,926	-		CA265_RS09715	0.73	+1.3
2,395,006	+		CA265_RS09715	0.82	+3.0
2,395,057	+		CA265_RS09715	0.88	+3.1
2,395,060	-		CA265_RS09715	0.88	+0.0
2,395,138	+				+3.3
2,395,734	-		CA265_RS09720	0.18	-1.3
2,395,756	+				-1.6
2,395,757	-		CA265_RS09720	0.18	-1.3
2,395,806	+		CA265_RS09720	0.20	-1.3
2,395,811	+		CA265_RS09720	0.21	-2.0
2,395,812	-		CA265_RS09720	0.21	-3.8
2,395,834	-		CA265_RS09720	0.22	-0.6
2,395,866	+		CA265_RS09720	0.23	-1.7
2,395,866	+		CA265_RS09720	0.23	-2.1
2,395,938	-		CA265_RS09720	0.26	-2.3
2,395,949	+		CA265_RS09720	0.26	+0.0
2,395,972	-		CA265_RS09720	0.27	-1.3
2,395,972	-		CA265_RS09720	0.27	-4.1
2,395,972	-		CA265_RS09720	0.27	-2.6
2,395,972	-		CA265_RS09720	0.27	-2.8
2,395,974	-		CA265_RS09720	0.27	-5.1
2,396,036	+		CA265_RS09720	0.30	-3.9
2,396,036	+		CA265_RS09720	0.30	-1.7
2,396,040	+		CA265_RS09720	0.30	-1.7
2,396,060	+		CA265_RS09720	0.31	-2.4
2,396,066	-		CA265_RS09720	0.31	-3.3
2,396,137	-		CA265_RS09720	0.34	-3.7
2,396,160	+		CA265_RS09720	0.35	-0.8