Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08040

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
2,001,347	+				+1.8
2,001,453	+		CA265_RS08035	0.12	-0.4
2,001,455	+		CA265_RS08035	0.12	-0.5
2,001,509	+		CA265_RS08035	0.18	-0.7
2,001,603	+		CA265_RS08035	0.29	+0.0
2,001,604	-		CA265_RS08035	0.30	+0.0
2,001,605	+		CA265_RS08035	0.30	+0.4
2,001,654	-		CA265_RS08035	0.35	-0.3
2,001,689	-		CA265_RS08035	0.40	-0.4
2,001,754	+		CA265_RS08035	0.47	-0.7
2,001,756	+		CA265_RS08035	0.48	+0.0
2,001,757	-		CA265_RS08035	0.48	+0.4
2,001,770	+		CA265_RS08035	0.49	-0.1
2,001,773	-		CA265_RS08035	0.50	-0.8
2,001,783	+		CA265_RS08035	0.51	-0.2
2,001,799	-		CA265_RS08035	0.53	+0.2
2,001,888	+		CA265_RS08035	0.63	+0.4
2,001,910	+		CA265_RS08035	0.66	+0.0
2,001,961	+		CA265_RS08035	0.72	-0.4
2,002,022	+		CA265_RS08035	0.79	+1.8
2,002,023	-		CA265_RS08035	0.79	-0.0
2,002,023	-		CA265_RS08035	0.79	+0.1
2,002,025	-		CA265_RS08035	0.80	-2.0
2,002,049	-		CA265_RS08035	0.82	+0.2
2,002,198	+				-0.1
2,002,198	+				-0.8
2,002,227	+				-0.1
2,002,227	+				-0.1
2,002,227	+				-1.6
2,002,228	-				+0.3
2,002,241	-				+0.3
2,002,329	-				-0.2
2,002,329	-				+2.0
2,002,329	-				+0.2
2,002,350	-				+0.4
2,002,411	+				+0.0
2,002,411	+				+0.4
2,002,417	+				+0.2
2,002,469	+		CA265_RS08040	0.15	-0.1
2,002,588	+		CA265_RS08040	0.28	-0.6
2,002,699	+		CA265_RS08040	0.40	-0.5
2,002,856	+		CA265_RS08040	0.58	-0.2
2,002,990	-		CA265_RS08040	0.72	-0.0
2,003,009	+		CA265_RS08040	0.74	-0.0
2,003,010	-		CA265_RS08040	0.74	-0.7
2,003,010	-		CA265_RS08040	0.74	-0.2
2,003,010	-		CA265_RS08040	0.74	-1.0
2,003,070	-		CA265_RS08040	0.81	-0.4
2,003,130	-		CA265_RS08040	0.88	+0.3
2,003,191	-				+0.1
2,003,226	-				-0.6
2,003,241	+				-0.1
2,003,241	+				-0.2
2,003,251	-				+0.4
2,003,266	-				-0.2
2,003,273	-				-0.4
2,003,385	+				+0.6
2,003,410	+				-0.3
2,003,410	+				+0.1
2,003,411	-				-0.4
2,003,453	+				-0.4
2,003,454	-				+0.5
2,003,476	-				+0.6
2,003,478	+				-0.8
2,003,479	-				-0.2
2,003,499	+				-1.0
2,003,503	-				-0.4
2,003,634	+				-0.6
2,003,690	-		CA265_RS08045	0.15	-1.9
2,003,690	-		CA265_RS08045	0.15	-0.6
2,003,720	+		CA265_RS08045	0.22	-0.2
2,003,751	+		CA265_RS08045	0.29	-0.0
2,003,751	+		CA265_RS08045	0.29	-0.1
2,003,752	-		CA265_RS08045	0.29	+0.3
2,003,777	+		CA265_RS08045	0.34	-0.1
2,003,829	-		CA265_RS08045	0.46	+0.6
2,003,857	+		CA265_RS08045	0.52	-0.4
2,003,876	+		CA265_RS08045	0.56	+0.3
2,003,946	+		CA265_RS08045	0.72	+0.3
2,003,947	-		CA265_RS08045	0.72	+0.5
2,003,947	-		CA265_RS08045	0.72	-0.3
2,004,015	+		CA265_RS08045	0.87	-0.2
2,004,035	+				-0.2
2,004,066	-				-0.3
2,004,071	+				-0.3
2,004,072	-				-0.2
2,004,093	+				+0.0
2,004,172	-				+1.0
2,004,199	-				-1.3
2,004,201	+				-0.1
2,004,208	+				+0.2
2,004,231	-				+0.9
2,004,241	+				-0.2
2,004,242	-				+0.3