Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05775

Experiment: R2A with Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Carbenicillin 0.2 mg/ml
1,404,657	-		CA265_RS05770	0.36	+0.1
1,404,660	+		CA265_RS05770	0.37	-0.9
1,404,660	+		CA265_RS05770	0.37	-0.1
1,404,728	-		CA265_RS05770	0.41	+0.6
1,404,733	+		CA265_RS05770	0.41	+0.5
1,404,733	+		CA265_RS05770	0.41	-0.9
1,404,749	+		CA265_RS05770	0.42	+0.4
1,404,765	+		CA265_RS05770	0.43	+1.4
1,404,772	+		CA265_RS05770	0.44	-0.6
1,404,840	+		CA265_RS05770	0.48	+0.3
1,404,886	-		CA265_RS05770	0.51	+0.5
1,404,886	-		CA265_RS05770	0.51	-0.1
1,404,946	+		CA265_RS05770	0.55	+0.2
1,404,953	-		CA265_RS05770	0.56	+0.1
1,405,035	-		CA265_RS05770	0.61	+0.3
1,405,081	+		CA265_RS05770	0.64	-1.3
1,405,171	+		CA265_RS05770	0.70	+0.5
1,405,287	-		CA265_RS05770	0.77	-0.7
1,405,453	+		CA265_RS05770	0.88	-0.2
1,405,575	+				-0.2
1,405,575	+				+0.9
1,405,576	-				+0.3
1,405,630	-				-0.4
1,405,632	+				+0.5
1,405,641	+				-0.3
1,405,641	+				-0.7
1,405,654	-				+0.5
1,405,679	-				+0.4
1,405,684	+				-0.7
1,405,733	+		CA265_RS05775	0.18	-0.1
1,405,734	-		CA265_RS05775	0.18	+0.0
1,405,734	-		CA265_RS05775	0.18	-0.2
1,405,734	-		CA265_RS05775	0.18	+0.5
1,405,734	-		CA265_RS05775	0.18	+0.4
1,405,749	-		CA265_RS05775	0.21	+0.3
1,405,749	-		CA265_RS05775	0.21	-0.1
1,405,823	-		CA265_RS05775	0.38	+0.4
1,405,827	-		CA265_RS05775	0.39	+1.0
1,405,834	+		CA265_RS05775	0.41	+0.3
1,405,849	+		CA265_RS05775	0.44	-0.1
1,405,894	+		CA265_RS05775	0.54	+1.2
1,405,995	-		CA265_RS05775	0.77	+0.3
1,405,999	-		CA265_RS05775	0.78	-0.2
1,406,018	+		CA265_RS05775	0.82	+1.1
1,406,025	-		CA265_RS05775	0.84	-0.5
1,406,067	-				-0.9
1,406,071	-				+0.3
1,406,149	+				+0.2
1,406,149	+				+0.8
1,406,151	+				+0.4
1,406,185	+				-0.4
1,406,185	+				+0.5
1,406,185	+				-0.0
1,406,185	+				+0.4
1,406,190	+				-0.9
1,406,190	+				+0.3
1,406,263	-				+0.3
1,406,344	-				-1.7
1,406,368	-				-0.5
1,406,370	-				-0.3
1,406,377	+				+0.8
1,406,378	-				-0.4
1,406,593	+				-0.3
1,406,602	-				-0.0
1,406,631	+				+1.1
1,406,686	+				-0.3
1,406,776	+				+0.1
1,406,777	-				-0.5
1,406,784	+				+0.9
1,406,868	+		CA265_RS05780	0.12	-1.1
1,406,946	-		CA265_RS05780	0.14	-0.8
1,407,057	-		CA265_RS05780	0.17	-1.3
1,407,060	-		CA265_RS05780	0.17	+0.4
1,407,077	+		CA265_RS05780	0.18	-0.3