Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3013 and Ac3H11_3014 overlap by 4 nucleotides Ac3H11_3014 and Ac3H11_3015 are separated by 20 nucleotides Ac3H11_3015 and Ac3H11_3016 are separated by 526 nucleotides
Ac3H11_3013 - DinB family protein, at 35,215 to 35,700
_3013
Ac3H11_3014 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18), at 35,697 to 36,482
_3014
Ac3H11_3015 - Probable transmembrane protein, at 36,503 to 37,228
_3015
Ac3H11_3016 - Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4), at 37,755 to 39,782
_3016
Position (kb) 36
37
38 Strain fitness (log2 ratio) -1
0
1 at 35.527 kb on + strand, within Ac3H11_3013 at 35.527 kb on + strand, within Ac3H11_3013 at 35.527 kb on + strand, within Ac3H11_3013 at 35.527 kb on + strand, within Ac3H11_3013 at 35.671 kb on + strand at 35.672 kb on - strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.495 kb on + strand at 36.496 kb on - strand at 36.496 kb on - strand at 36.496 kb on - strand at 36.556 kb on + strand at 36.556 kb on + strand at 36.556 kb on + strand at 36.677 kb on + strand, within Ac3H11_3015 at 37.086 kb on - strand, within Ac3H11_3015 at 37.263 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.287 kb on + strand at 37.288 kb on - strand at 37.337 kb on + strand at 37.399 kb on + strand at 37.399 kb on + strand at 37.400 kb on - strand at 37.400 kb on - strand at 37.719 kb on + strand at 37.719 kb on + strand at 37.723 kb on + strand at 37.723 kb on + strand at 37.723 kb on + strand at 37.741 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 35,527 + Ac3H11_3013 0.64 -1.0 35,527 + Ac3H11_3013 0.64 +0.5 35,527 + Ac3H11_3013 0.64 +0.1 35,527 + Ac3H11_3013 0.64 +0.2 35,671 + -0.0 35,672 - -0.9 36,495 + +0.1 36,495 + -0.2 36,495 + +0.8 36,495 + -0.0 36,495 + -0.7 36,495 + +0.0 36,495 + -1.5 36,496 - -0.5 36,496 - -0.3 36,496 - -0.2 36,556 + +0.6 36,556 + -0.4 36,556 + -0.4 36,677 + Ac3H11_3015 0.24 -1.0 37,086 - Ac3H11_3015 0.80 -0.9 37,263 + +0.4 37,287 + +0.2 37,287 + -0.1 37,287 + +0.5 37,287 + -0.3 37,287 + -0.3 37,287 + +0.3 37,287 + +0.2 37,287 + -0.6 37,287 + -0.6 37,287 + +0.2 37,288 - -0.5 37,337 + +0.2 37,399 + +0.0 37,399 + -0.4 37,400 - +0.6 37,400 - +0.2 37,719 + +0.1 37,719 + -0.7 37,723 + +0.4 37,723 + -0.2 37,723 + +0.2 37,741 - -0.1
Or see this region's nucleotide sequence