Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26140

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_26130 and AO353_26135 are separated by 204 nucleotidesAO353_26135 and AO353_26140 are separated by 42 nucleotidesAO353_26140 and AO353_26145 are separated by 93 nucleotidesAO353_26145 and AO353_26150 are separated by 508 nucleotides AO353_26130: AO353_26130 - host specificity protein, at 5,749,686 to 5,753,243 _26130 AO353_26135: AO353_26135 - phage tail protein, at 5,753,448 to 5,754,056 _26135 AO353_26140: AO353_26140 - hypothetical protein, at 5,754,099 to 5,754,521 _26140 AO353_26145: AO353_26145 - NIPSNAP family containing protein, at 5,754,615 to 5,754,959 _26145 AO353_26150: AO353_26150 - hypothetical protein, at 5,755,468 to 5,756,481 _26150 Position (kb) 5754 5755Strain fitness (log2 ratio) -2 -1 0 1 2 3at 5753.220 kb on - strandat 5753.243 kb on + strandat 5753.243 kb on + strandat 5753.449 kb on + strandat 5753.450 kb on - strandat 5753.450 kb on - strandat 5753.457 kb on - strandat 5753.467 kb on + strandat 5753.467 kb on + strandat 5753.467 kb on + strandat 5753.468 kb on - strandat 5753.569 kb on + strand, within AO353_26135at 5753.569 kb on + strand, within AO353_26135at 5753.569 kb on + strandat 5753.570 kb on - strand, within AO353_26135at 5753.716 kb on + strand, within AO353_26135at 5753.716 kb on + strand, within AO353_26135at 5753.716 kb on + strand, within AO353_26135at 5753.717 kb on - strand, within AO353_26135at 5753.717 kb on - strand, within AO353_26135at 5753.717 kb on - strand, within AO353_26135at 5753.717 kb on - strand, within AO353_26135at 5753.717 kb on - strand, within AO353_26135at 5753.811 kb on - strandat 5753.811 kb on - strand, within AO353_26135at 5753.852 kb on + strand, within AO353_26135at 5753.896 kb on - strand, within AO353_26135at 5753.972 kb on - strand, within AO353_26135at 5753.978 kb on + strand, within AO353_26135at 5753.978 kb on + strand, within AO353_26135at 5753.979 kb on - strand, within AO353_26135at 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.037 kb on + strandat 5754.038 kb on - strandat 5754.038 kb on - strandat 5754.038 kb on - strandat 5754.038 kb on - strandat 5754.038 kb on - strandat 5754.043 kb on - strandat 5754.043 kb on - strandat 5754.044 kb on + strandat 5754.044 kb on + strandat 5754.044 kb on + strandat 5754.044 kb on + strandat 5754.044 kb on + strandat 5754.044 kb on + strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.045 kb on - strandat 5754.117 kb on + strandat 5754.117 kb on + strandat 5754.117 kb on + strandat 5754.117 kb on + strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.118 kb on - strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.119 kb on + strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.120 kb on - strandat 5754.123 kb on + strandat 5754.123 kb on + strandat 5754.123 kb on + strandat 5754.123 kb on + strandat 5754.123 kb on + strandat 5754.123 kb on + strandat 5754.124 kb on - strandat 5754.124 kb on - strandat 5754.124 kb on - strandat 5754.124 kb on - strandat 5754.124 kb on - strandat 5754.124 kb on - strandat 5754.124 kb on - strandat 5754.178 kb on - strand, within AO353_26140at 5754.178 kb on - strand, within AO353_26140at 5754.178 kb on - strand, within AO353_26140at 5754.178 kb on - strand, within AO353_26140at 5754.178 kb on - strand, within AO353_26140at 5754.221 kb on + strand, within AO353_26140at 5754.221 kb on + strand, within AO353_26140at 5754.222 kb on - strand, within AO353_26140at 5754.222 kb on - strand, within AO353_26140at 5754.222 kb on - strand, within AO353_26140at 5754.233 kb on + strand, within AO353_26140at 5754.235 kb on + strand, within AO353_26140at 5754.236 kb on - strand, within AO353_26140at 5754.236 kb on - strand, within AO353_26140at 5754.271 kb on + strand, within AO353_26140at 5754.271 kb on + strand, within AO353_26140at 5754.271 kb on + strand, within AO353_26140at 5754.272 kb on - strand, within AO353_26140at 5754.272 kb on - strand, within AO353_26140at 5754.272 kb on - strand, within AO353_26140at 5754.272 kb on - strand, within AO353_26140at 5754.315 kb on - strand, within AO353_26140at 5754.372 kb on + strand, within AO353_26140at 5754.373 kb on - strand, within AO353_26140at 5754.373 kb on - strand, within AO353_26140at 5754.373 kb on - strand, within AO353_26140at 5754.389 kb on - strand, within AO353_26140at 5754.412 kb on + strand, within AO353_26140at 5754.452 kb on + strand, within AO353_26140at 5754.452 kb on + strand, within AO353_26140at 5754.452 kb on + strand, within AO353_26140at 5754.453 kb on - strand, within AO353_26140at 5754.453 kb on - strand, within AO353_26140at 5754.453 kb on - strand, within AO353_26140at 5754.453 kb on - strand, within AO353_26140at 5754.453 kb on - strand, within AO353_26140at 5754.453 kb on - strand, within AO353_26140at 5754.508 kb on - strandat 5754.540 kb on + strandat 5754.540 kb on + strandat 5754.540 kb on + strandat 5754.540 kb on + strandat 5754.540 kb on + strandat 5754.541 kb on - strandat 5754.541 kb on - strandat 5754.541 kb on - strandat 5754.541 kb on - strandat 5754.541 kb on - strandat 5754.542 kb on + strandat 5754.543 kb on - strandat 5754.554 kb on - strandat 5754.569 kb on - strandat 5754.590 kb on + strandat 5754.590 kb on + strandat 5754.616 kb on + strandat 5754.616 kb on + strandat 5754.671 kb on + strand, within AO353_26145at 5754.672 kb on - strand, within AO353_26145at 5754.672 kb on - strand, within AO353_26145at 5754.687 kb on + strand, within AO353_26145at 5754.688 kb on - strand, within AO353_26145at 5754.688 kb on - strand, within AO353_26145at 5754.708 kb on - strand, within AO353_26145at 5754.708 kb on - strand, within AO353_26145at 5754.708 kb on - strand, within AO353_26145at 5754.765 kb on + strand, within AO353_26145at 5754.787 kb on + strand, within AO353_26145at 5754.799 kb on - strand, within AO353_26145at 5754.805 kb on + strand, within AO353_26145at 5754.805 kb on + strand, within AO353_26145at 5754.805 kb on + strand, within AO353_26145at 5754.806 kb on - strand, within AO353_26145at 5754.806 kb on - strand, within AO353_26145at 5754.806 kb on - strand, within AO353_26145at 5754.806 kb on - strand, within AO353_26145at 5754.835 kb on + strand, within AO353_26145at 5754.891 kb on + strand, within AO353_26145at 5754.931 kb on + strandat 5754.931 kb on + strandat 5754.931 kb on + strandat 5754.931 kb on + strandat 5754.932 kb on - strandat 5754.932 kb on - strandat 5754.932 kb on - strandat 5754.932 kb on - strandat 5754.932 kb on - strandat 5754.997 kb on - strandat 5754.997 kb on - strandat 5754.997 kb on - strandat 5754.997 kb on - strandat 5754.997 kb on - strandat 5755.042 kb on - strandat 5755.042 kb on - strandat 5755.042 kb on - strandat 5755.042 kb on - strandat 5755.049 kb on + strandat 5755.049 kb on + strandat 5755.050 kb on - strandat 5755.050 kb on - strandat 5755.128 kb on + strandat 5755.129 kb on - strandat 5755.129 kb on - strandat 5755.190 kb on + strandat 5755.196 kb on + strandat 5755.197 kb on - strandat 5755.197 kb on - strandat 5755.207 kb on + strandat 5755.207 kb on + strandat 5755.207 kb on + strandat 5755.207 kb on + strandat 5755.207 kb on + strandat 5755.208 kb on - strandat 5755.208 kb on - strandat 5755.237 kb on + strandat 5755.237 kb on + strandat 5755.237 kb on + strandat 5755.237 kb on + strandat 5755.237 kb on + strandat 5755.237 kb on + strandat 5755.237 kb on + strandat 5755.238 kb on - strandat 5755.238 kb on - strandat 5755.238 kb on - strandat 5755.238 kb on - strandat 5755.238 kb on - strandat 5755.250 kb on + strandat 5755.251 kb on - strandat 5755.275 kb on + strandat 5755.276 kb on - strandat 5755.283 kb on - strandat 5755.283 kb on - strandat 5755.283 kb on - strandat 5755.283 kb on - strandat 5755.296 kb on + strandat 5755.380 kb on + strandat 5755.381 kb on - strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.434 kb on + strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.435 kb on - strandat 5755.476 kb on - strandat 5755.506 kb on - strandat 5755.506 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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5,753,220 - -0.5
5,753,243 + +0.1
5,753,243 + -1.2
5,753,449 + +0.5
5,753,450 - -0.7
5,753,450 - -1.7
5,753,457 - -1.3
5,753,467 + +0.3
5,753,467 + -0.3
5,753,467 + -0.0
5,753,468 - +0.3
5,753,569 + AO353_26135 0.20 -0.4
5,753,569 + AO353_26135 0.20 +0.5
5,753,569 + -0.3
5,753,570 - AO353_26135 0.20 +0.3
5,753,716 + AO353_26135 0.44 -0.4
5,753,716 + AO353_26135 0.44 -0.8
5,753,716 + AO353_26135 0.44 +0.9
5,753,717 - AO353_26135 0.44 -0.0
5,753,717 - AO353_26135 0.44 -1.0
5,753,717 - AO353_26135 0.44 -1.4
5,753,717 - AO353_26135 0.44 -0.4
5,753,717 - AO353_26135 0.44 -1.1
5,753,811 - -1.3
5,753,811 - AO353_26135 0.60 -1.3
5,753,852 + AO353_26135 0.66 -1.3
5,753,896 - AO353_26135 0.74 -0.7
5,753,972 - AO353_26135 0.86 -1.1
5,753,978 + AO353_26135 0.87 -0.9
5,753,978 + AO353_26135 0.87 +2.2
5,753,979 - AO353_26135 0.87 -0.8
5,754,037 + +0.7
5,754,037 + -1.0
5,754,037 + -0.3
5,754,037 + -0.8
5,754,037 + -2.1
5,754,037 + +1.3
5,754,037 + -0.4
5,754,037 + -1.3
5,754,038 - -1.3
5,754,038 - +0.0
5,754,038 - +0.6
5,754,038 - -0.4
5,754,038 - -0.3
5,754,043 - +0.3
5,754,043 - +0.3
5,754,044 + -0.4
5,754,044 + -2.0
5,754,044 + -1.1
5,754,044 + -0.8
5,754,044 + +0.3
5,754,044 + -0.0
5,754,045 - +0.5
5,754,045 - +0.5
5,754,045 - -1.6
5,754,045 - -0.4
5,754,045 - +0.5
5,754,045 - +1.0
5,754,045 - +0.8
5,754,045 - -0.8
5,754,045 - +1.3
5,754,045 - +1.3
5,754,117 + +0.0
5,754,117 + +0.1
5,754,117 + -1.3
5,754,117 + -0.3
5,754,118 - -0.3
5,754,118 - -1.8
5,754,118 - +0.1
5,754,118 - -1.1
5,754,118 - +0.3
5,754,118 - +0.0
5,754,118 - +0.7
5,754,118 - +1.0
5,754,118 - -1.7
5,754,118 - +1.0
5,754,118 - +2.3
5,754,118 - -0.1
5,754,118 - -0.3
5,754,118 - -0.7
5,754,118 - +1.3
5,754,118 - -0.9
5,754,118 - +2.3
5,754,119 + +0.7
5,754,119 + -0.7
5,754,119 + +0.3
5,754,119 + -1.7
5,754,119 + -0.7
5,754,119 + +0.5
5,754,119 + +0.6
5,754,119 + -1.0
5,754,119 + -0.4
5,754,119 + +1.7
5,754,119 + -0.5
5,754,119 + -0.3
5,754,119 + -0.9
5,754,119 + -0.4
5,754,119 + -1.3
5,754,119 + +0.9
5,754,119 + -1.0
5,754,119 + -0.1
5,754,120 - -2.1
5,754,120 - -1.0
5,754,120 - +0.4
5,754,120 - +1.1
5,754,120 - -1.3
5,754,120 - +0.6
5,754,120 - -0.9
5,754,120 - -0.7
5,754,120 - -1.8
5,754,120 - -0.3
5,754,120 - +0.9
5,754,120 - -0.4
5,754,120 - +0.3
5,754,120 - -0.5
5,754,120 - -0.6
5,754,120 - +2.3
5,754,120 - -1.7
5,754,120 - -1.3
5,754,120 - +2.1
5,754,120 - -1.0
5,754,120 - +0.3
5,754,120 - +1.1
5,754,120 - +0.6
5,754,120 - +0.0
5,754,123 + +0.3
5,754,123 + -2.5
5,754,123 + +0.6
5,754,123 + +0.7
5,754,123 + +0.7
5,754,123 + +0.2
5,754,124 - -1.3
5,754,124 - -0.7
5,754,124 - +0.7
5,754,124 - +0.9
5,754,124 - +0.5
5,754,124 - -2.1
5,754,124 - +0.0
5,754,178 - AO353_26140 0.19 -0.3
5,754,178 - AO353_26140 0.19 +0.1
5,754,178 - AO353_26140 0.19 +0.0
5,754,178 - AO353_26140 0.19 +1.9
5,754,178 - AO353_26140 0.19 -0.3
5,754,221 + AO353_26140 0.29 +0.3
5,754,221 + AO353_26140 0.29 -0.5
5,754,222 - AO353_26140 0.29 +0.4
5,754,222 - AO353_26140 0.29 +3.7
5,754,222 - AO353_26140 0.29 -0.5
5,754,233 + AO353_26140 0.32 -1.3
5,754,235 + AO353_26140 0.32 -0.3
5,754,236 - AO353_26140 0.32 +0.2
5,754,236 - AO353_26140 0.32 +0.6
5,754,271 + AO353_26140 0.41 +0.0
5,754,271 + AO353_26140 0.41 +0.2
5,754,271 + AO353_26140 0.41 +0.6
5,754,272 - AO353_26140 0.41 +1.1
5,754,272 - AO353_26140 0.41 -0.0
5,754,272 - AO353_26140 0.41 -1.1
5,754,272 - AO353_26140 0.41 -1.1
5,754,315 - AO353_26140 0.51 +0.6
5,754,372 + AO353_26140 0.65 +1.3
5,754,373 - AO353_26140 0.65 -1.0
5,754,373 - AO353_26140 0.65 -1.3
5,754,373 - AO353_26140 0.65 -0.3
5,754,389 - AO353_26140 0.69 -1.0
5,754,412 + AO353_26140 0.74 +0.9
5,754,452 + AO353_26140 0.83 +1.3
5,754,452 + AO353_26140 0.83 -0.6
5,754,452 + AO353_26140 0.83 -0.0
5,754,453 - AO353_26140 0.84 -0.1
5,754,453 - AO353_26140 0.84 +1.3
5,754,453 - AO353_26140 0.84 -1.7
5,754,453 - AO353_26140 0.84 +0.3
5,754,453 - AO353_26140 0.84 +0.1
5,754,453 - AO353_26140 0.84 +0.6
5,754,508 - -1.5
5,754,540 + -0.5
5,754,540 + -1.1
5,754,540 + -0.1
5,754,540 + +2.1
5,754,540 + +0.3
5,754,541 - +0.2
5,754,541 - -0.4
5,754,541 - -0.2
5,754,541 - -0.5
5,754,541 - +1.9
5,754,542 + -0.2
5,754,543 - +0.0
5,754,554 - +1.3
5,754,569 - -1.3
5,754,590 + -0.9
5,754,590 + -1.3
5,754,616 + +1.3
5,754,616 + -0.3
5,754,671 + AO353_26145 0.16 -0.5
5,754,672 - AO353_26145 0.17 +0.2
5,754,672 - AO353_26145 0.17 -1.4
5,754,687 + AO353_26145 0.21 -0.5
5,754,688 - AO353_26145 0.21 -0.5
5,754,688 - AO353_26145 0.21 +0.7
5,754,708 - AO353_26145 0.27 +1.7
5,754,708 - AO353_26145 0.27 -0.2
5,754,708 - AO353_26145 0.27 -1.5
5,754,765 + AO353_26145 0.43 -0.3
5,754,787 + AO353_26145 0.50 -1.7
5,754,799 - AO353_26145 0.53 -1.1
5,754,805 + AO353_26145 0.55 -1.5
5,754,805 + AO353_26145 0.55 -0.7
5,754,805 + AO353_26145 0.55 +0.0
5,754,806 - AO353_26145 0.55 +2.7
5,754,806 - AO353_26145 0.55 -0.4
5,754,806 - AO353_26145 0.55 -0.3
5,754,806 - AO353_26145 0.55 -1.3
5,754,835 + AO353_26145 0.64 +1.6
5,754,891 + AO353_26145 0.80 -1.1
5,754,931 + -1.7
5,754,931 + -0.5
5,754,931 + +0.3
5,754,931 + -0.3
5,754,932 - -1.0
5,754,932 - +0.9
5,754,932 - -2.1
5,754,932 - -0.5
5,754,932 - -0.7
5,754,997 - -0.1
5,754,997 - +0.3
5,754,997 - -2.0
5,754,997 - +0.6
5,754,997 - +0.9
5,755,042 - -0.7
5,755,042 - -0.1
5,755,042 - +0.0
5,755,042 - -0.8
5,755,049 + -1.3
5,755,049 + +0.5
5,755,050 - +0.6
5,755,050 - +0.1
5,755,128 + -0.4
5,755,129 - -0.3
5,755,129 - +0.7
5,755,190 + -0.3
5,755,196 + -0.7
5,755,197 - +0.2
5,755,197 - +1.7
5,755,207 + +0.1
5,755,207 + -0.8
5,755,207 + +0.7
5,755,207 + +0.0
5,755,207 + -2.0
5,755,208 - +2.7
5,755,208 - -0.7
5,755,237 + +1.1
5,755,237 + -0.4
5,755,237 + +0.7
5,755,237 + -0.3
5,755,237 + -0.2
5,755,237 + -0.1
5,755,237 + -0.0
5,755,238 - -0.5
5,755,238 - -1.2
5,755,238 - +0.9
5,755,238 - -0.7
5,755,238 - +0.2
5,755,250 + +0.5
5,755,251 - -0.3
5,755,275 + -2.1
5,755,276 - +1.3
5,755,283 - -0.4
5,755,283 - +0.3
5,755,283 - +0.5
5,755,283 - +0.2
5,755,296 + -2.1
5,755,380 + +0.3
5,755,381 - +1.0
5,755,434 + -1.0
5,755,434 + +1.3
5,755,434 + -0.3
5,755,434 + -0.5
5,755,434 + -2.6
5,755,434 + -2.0
5,755,434 + -1.6
5,755,434 + -0.0
5,755,435 - +0.3
5,755,435 - +1.6
5,755,435 - +0.0
5,755,435 - +0.9
5,755,435 - +0.2
5,755,435 - +0.7
5,755,435 - -0.5
5,755,435 - +0.5
5,755,435 - -1.0
5,755,435 - +1.3
5,755,435 - -1.1
5,755,476 - +0.3
5,755,506 - +0.0
5,755,506 - -0.4

Or see this region's nucleotide sequence