Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25635 and AO353_25640 are separated by 328 nucleotides AO353_25640 and AO353_25645 are separated by 12 nucleotides AO353_25645 and AO353_25650 are separated by 76 nucleotides
AO353_25635: AO353_25635 - citrulline utilization hydrolase (from data) , at 5,654,379 to 5,655,314
_25635
AO353_25640: AO353_25640 - AsnC family transcriptional regulator, at 5,655,643 to 5,656,119
_25640
AO353_25645: AO353_25645 - amino acid transporter, at 5,656,132 to 5,656,893
_25645
AO353_25650: AO353_25650 - amino acid ABC transporter permease, at 5,656,970 to 5,657,680
_25650
Position (kb)
5655
5656
5657 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5654.761 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.761 kb on + strand, within AO353_25635 at 5654.925 kb on + strand, within AO353_25635 at 5654.925 kb on + strand, within AO353_25635 at 5654.925 kb on + strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.926 kb on - strand, within AO353_25635 at 5654.997 kb on + strand, within AO353_25635 at 5654.997 kb on + strand, within AO353_25635 at 5654.998 kb on - strand, within AO353_25635 at 5655.172 kb on + strand, within AO353_25635 at 5655.172 kb on + strand, within AO353_25635 at 5655.173 kb on - strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.204 kb on + strand, within AO353_25635 at 5655.205 kb on - strand, within AO353_25635 at 5655.383 kb on - strand at 5655.449 kb on + strand at 5655.449 kb on + strand at 5655.450 kb on - strand at 5655.477 kb on - strand at 5655.517 kb on - strand at 5655.564 kb on - strand at 5655.644 kb on + strand at 5655.644 kb on + strand at 5655.645 kb on - strand at 5655.645 kb on - strand at 5655.645 kb on - strand at 5655.645 kb on - strand at 5655.776 kb on + strand, within AO353_25640 at 5655.777 kb on - strand, within AO353_25640 at 5655.895 kb on + strand, within AO353_25640 at 5656.031 kb on + strand, within AO353_25640 at 5656.031 kb on + strand, within AO353_25640 at 5656.031 kb on + strand, within AO353_25640 at 5656.081 kb on - strand at 5656.101 kb on + strand at 5656.121 kb on + strand at 5656.121 kb on + strand at 5656.122 kb on - strand at 5656.122 kb on - strand at 5656.122 kb on - strand at 5656.122 kb on - strand at 5656.122 kb on - strand at 5656.122 kb on - strand at 5656.122 kb on - strand at 5656.162 kb on + strand at 5656.330 kb on + strand, within AO353_25645 at 5656.330 kb on + strand, within AO353_25645 at 5656.330 kb on + strand, within AO353_25645 at 5656.330 kb on + strand, within AO353_25645 at 5656.330 kb on + strand, within AO353_25645 at 5656.331 kb on - strand, within AO353_25645 at 5656.331 kb on - strand, within AO353_25645 at 5656.331 kb on - strand, within AO353_25645 at 5656.500 kb on - strand, within AO353_25645 at 5656.750 kb on - strand, within AO353_25645 at 5656.750 kb on - strand, within AO353_25645 at 5656.750 kb on - strand, within AO353_25645 at 5656.761 kb on + strand, within AO353_25645 at 5656.761 kb on + strand, within AO353_25645 at 5656.761 kb on + strand, within AO353_25645 at 5656.761 kb on + strand, within AO353_25645 at 5656.762 kb on - strand, within AO353_25645 at 5656.762 kb on - strand, within AO353_25645 at 5656.762 kb on - strand, within AO353_25645 at 5656.762 kb on - strand, within AO353_25645 at 5656.762 kb on - strand, within AO353_25645 at 5656.762 kb on - strand, within AO353_25645 at 5656.840 kb on + strand at 5656.840 kb on + strand at 5656.840 kb on + strand at 5656.840 kb on + strand at 5656.840 kb on + strand at 5656.840 kb on + strand at 5656.840 kb on + strand at 5656.841 kb on - strand at 5656.841 kb on - strand at 5656.841 kb on - strand at 5656.841 kb on - strand at 5656.841 kb on - strand at 5656.863 kb on + strand at 5656.863 kb on + strand at 5656.864 kb on - strand at 5656.864 kb on - strand at 5656.864 kb on - strand at 5656.864 kb on - strand at 5656.865 kb on + strand at 5656.865 kb on + strand at 5656.865 kb on + strand at 5656.866 kb on - strand at 5656.890 kb on - strand at 5656.890 kb on - strand at 5656.890 kb on - strand at 5657.053 kb on - strand, within AO353_25650
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 5,654,761 + AO353_25635 0.41 +0.1 5,654,761 + AO353_25635 0.41 +0.4 5,654,761 + AO353_25635 0.41 +0.1 5,654,761 + AO353_25635 0.41 -0.4 5,654,925 + AO353_25635 0.58 -0.3 5,654,925 + AO353_25635 0.58 +0.1 5,654,925 + AO353_25635 0.58 +0.3 5,654,926 - AO353_25635 0.58 -0.4 5,654,926 - AO353_25635 0.58 +0.6 5,654,926 - AO353_25635 0.58 +0.8 5,654,926 - AO353_25635 0.58 +0.5 5,654,926 - AO353_25635 0.58 +0.1 5,654,997 + AO353_25635 0.66 -0.9 5,654,997 + AO353_25635 0.66 -1.1 5,654,998 - AO353_25635 0.66 +0.1 5,655,172 + AO353_25635 0.85 -0.4 5,655,172 + AO353_25635 0.85 +0.7 5,655,173 - AO353_25635 0.85 +0.3 5,655,204 + AO353_25635 0.88 -1.9 5,655,204 + AO353_25635 0.88 -1.5 5,655,204 + AO353_25635 0.88 +1.8 5,655,204 + AO353_25635 0.88 +0.1 5,655,204 + AO353_25635 0.88 -0.5 5,655,204 + AO353_25635 0.88 +0.2 5,655,205 - AO353_25635 0.88 +0.7 5,655,383 - -0.1 5,655,449 + +0.3 5,655,449 + -0.5 5,655,450 - -1.0 5,655,477 - -0.7 5,655,517 - +0.3 5,655,564 - -0.0 5,655,644 + +1.5 5,655,644 + +1.1 5,655,645 - +0.7 5,655,645 - -0.0 5,655,645 - -0.3 5,655,645 - -0.7 5,655,776 + AO353_25640 0.28 +0.7 5,655,777 - AO353_25640 0.28 -1.9 5,655,895 + AO353_25640 0.53 +0.3 5,656,031 + AO353_25640 0.81 -0.5 5,656,031 + AO353_25640 0.81 -0.9 5,656,031 + AO353_25640 0.81 -1.0 5,656,081 - +0.0 5,656,101 + -1.5 5,656,121 + +0.1 5,656,121 + -0.7 5,656,122 - +2.0 5,656,122 - -0.1 5,656,122 - -0.9 5,656,122 - -1.0 5,656,122 - +0.1 5,656,122 - -1.3 5,656,122 - -0.7 5,656,162 + -0.9 5,656,330 + AO353_25645 0.26 -1.0 5,656,330 + AO353_25645 0.26 -1.0 5,656,330 + AO353_25645 0.26 +0.1 5,656,330 + AO353_25645 0.26 -0.1 5,656,330 + AO353_25645 0.26 -1.5 5,656,331 - AO353_25645 0.26 +2.3 5,656,331 - AO353_25645 0.26 -1.3 5,656,331 - AO353_25645 0.26 +0.3 5,656,500 - AO353_25645 0.48 +0.3 5,656,750 - AO353_25645 0.81 +1.3 5,656,750 - AO353_25645 0.81 -0.9 5,656,750 - AO353_25645 0.81 -1.3 5,656,761 + AO353_25645 0.83 -0.5 5,656,761 + AO353_25645 0.83 -1.2 5,656,761 + AO353_25645 0.83 +0.2 5,656,761 + AO353_25645 0.83 +0.4 5,656,762 - AO353_25645 0.83 +1.6 5,656,762 - AO353_25645 0.83 +0.2 5,656,762 - AO353_25645 0.83 -0.9 5,656,762 - AO353_25645 0.83 +1.0 5,656,762 - AO353_25645 0.83 -0.4 5,656,762 - AO353_25645 0.83 +0.3 5,656,840 + -1.6 5,656,840 + +1.3 5,656,840 + -1.4 5,656,840 + -0.3 5,656,840 + -0.3 5,656,840 + +0.2 5,656,840 + +0.7 5,656,841 - +0.3 5,656,841 - -0.7 5,656,841 - -0.3 5,656,841 - +0.3 5,656,841 - +1.0 5,656,863 + +0.7 5,656,863 + +0.1 5,656,864 - -0.2 5,656,864 - +0.0 5,656,864 - -0.1 5,656,864 - +1.0 5,656,865 + +1.3 5,656,865 + -1.2 5,656,865 + +2.0 5,656,866 - +0.2 5,656,890 - +0.3 5,656,890 - -0.4 5,656,890 - -0.3 5,657,053 - AO353_25650 0.12 +0.5
Or see this region's nucleotide sequence