Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03113

Experiment: Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N)
3,262,807	-		CCNA_03112	0.66	+0.1
3,262,829	-		CCNA_03112	0.68	-1.2
3,262,892	+		CCNA_03112	0.73	-0.6
3,262,899	+		CCNA_03112	0.73	+0.1
3,262,899	+		CCNA_03112	0.73	+1.4
3,262,899	+		CCNA_03112	0.73	+1.6
3,262,899	+		CCNA_03112	0.73	+2.1
3,262,899	+		CCNA_03112	0.73	-1.0
3,262,900	-		CCNA_03112	0.73	+0.6
3,262,907	-		CCNA_03112	0.74	-0.5
3,262,907	-		CCNA_03112	0.74	-0.4
3,262,907	-		CCNA_03112	0.74	+0.6
3,262,907	-		CCNA_03112	0.74	-1.0
3,262,928	+		CCNA_03112	0.76	-0.7
3,262,936	-		CCNA_03112	0.76	+1.2
3,262,936	-		CCNA_03112	0.76	+0.1
3,262,947	+		CCNA_03112	0.77	-0.2
3,262,979	+		CCNA_03112	0.79	+0.1
3,263,006	-		CCNA_03112	0.82	+0.7
3,263,011	-		CCNA_03112	0.82	+0.8
3,263,018	-		CCNA_03112	0.83	-0.4
3,263,023	-		CCNA_03112	0.83	+0.4
3,263,055	-		CCNA_03112	0.85	+0.2
3,263,060	-		CCNA_03112	0.86	+0.7
3,263,076	+		CCNA_03112	0.87	-0.4
3,263,084	-		CCNA_03112	0.88	+0.2
3,263,126	+				-0.8
3,263,137	-				-1.0
3,263,191	+				-0.3
3,263,220	+				-0.3
3,263,220	+				-0.4
3,263,228	-				-1.8
3,263,228	-				+1.1
3,263,239	+				+0.5
3,263,247	-				+0.6
3,263,249	+				+1.2
3,263,249	+				-1.0
3,263,249	+				-0.0
3,263,249	+				-0.2
3,263,249	+				-0.5
3,263,249	+				+1.2
3,263,249	+				-0.3
3,263,257	-				-1.6
3,263,257	-				-0.4
3,263,257	-				-0.0
3,263,257	-				+0.0
3,263,257	-				+1.7
3,263,257	-				-2.3
3,263,264	+				-1.2
3,263,269	+				-0.8
3,263,269	+				+0.6
3,263,277	-				-0.9
3,263,278	-				+1.0
3,263,281	+				-0.7
3,263,300	+				-1.3
3,263,303	-				+0.4
3,263,308	-				-1.0
3,263,337	+				+1.4
3,263,343	+				+0.5
3,263,356	+				+2.2
3,263,445	+		CCNA_03985	0.17	+1.5
3,263,470	+		CCNA_03985	0.22	-0.8
3,263,489	+		CCNA_03985	0.27	+0.7
3,263,493	+		CCNA_03985	0.28	+0.5
3,263,494	+		CCNA_03985	0.28	+0.6
3,263,497	-		CCNA_03985	0.29	+2.2
3,263,497	-		CCNA_03985	0.29	-0.6
3,263,518	+		CCNA_03985	0.33	+0.4
3,263,549	+		CCNA_03985	0.40	-0.9
3,263,549	+		CCNA_03985	0.40	+1.0
3,263,554	+		CCNA_03985	0.41	-0.6
3,263,554	+		CCNA_03985	0.41	+0.6
3,263,554	+		CCNA_03985	0.41	-1.2
3,263,554	+		CCNA_03985	0.41	+0.6
3,263,559	+		CCNA_03985	0.43	-1.4
3,263,559	+		CCNA_03985	0.43	+1.2
3,263,562	-		CCNA_03985	0.43	+3.9
3,263,562	-		CCNA_03985	0.43	-1.4
3,263,571	+		CCNA_03985	0.45	+1.0
3,263,572	-		CCNA_03985	0.46	-0.1
3,263,639	+		CCNA_03985	0.61	+0.3
3,263,693	-		CCNA_03985	0.73	+1.2
3,263,706	+		CCNA_03985	0.76	-0.0
3,263,715	+		CCNA_03985	0.78	+0.2
3,263,723	-		CCNA_03985	0.80	-1.3
3,263,759	-		CCNA_03985	0.88	-1.8
3,263,761	+		CCNA_03985	0.88	-1.4
3,263,768	-				+0.2
3,263,769	-				-2.2
3,263,769	-				+0.6
3,263,772	+				-0.6
3,263,796	+				-0.4
3,263,804	-				-0.1
3,263,812	-				+0.1
3,263,838	+				-0.0
3,263,846	-				+0.5
3,263,846	-				+0.5
3,263,848	+				+1.2
3,263,851	-				+0.2
3,263,856	-		CCNA_03113	0.11	+1.1
3,263,866	-		CCNA_03113	0.12	+1.0
3,263,884	+		CCNA_03113	0.14	-0.2
3,263,892	-		CCNA_03113	0.16	+1.6
3,263,925	+		CCNA_03113	0.20	+1.2
3,263,928	-		CCNA_03113	0.21	+1.2
3,263,955	+		CCNA_03113	0.24	+0.6
3,263,969	+		CCNA_03113	0.26	-2.1
3,264,010	+		CCNA_03113	0.32	-2.2
3,264,011	+		CCNA_03113	0.32	+0.6
3,264,016	+		CCNA_03113	0.33	+0.8
3,264,026	-		CCNA_03113	0.34	+1.3
3,264,068	-		CCNA_03113	0.40	+1.1
3,264,097	+		CCNA_03113	0.44	-2.8
3,264,101	-		CCNA_03113	0.45	+0.2
3,264,113	+		CCNA_03113	0.46	-2.2
3,264,142	+		CCNA_03113	0.50	-1.8
3,264,144	-		CCNA_03113	0.51	+1.4
3,264,144	-				+0.6
3,264,150	-		CCNA_03113	0.51	+0.3
3,264,150	-				+2.2
3,264,179	+		CCNA_03113	0.55	+1.2
3,264,186	+		CCNA_03113	0.56	-0.4
3,264,209	-		CCNA_03113	0.60	+1.6
3,264,244	-		CCNA_03113	0.64	+1.6
3,264,244	-		CCNA_03113	0.64	-0.8
3,264,244	-		CCNA_03113	0.64	+1.3
3,264,254	+		CCNA_03113	0.66	-1.3
3,264,254	+		CCNA_03113	0.66	+0.3
3,264,254	+		CCNA_03113	0.66	+0.6
3,264,262	-		CCNA_03113	0.67	+2.4
3,264,266	+		CCNA_03113	0.68	-0.4
3,264,297	+		CCNA_03113	0.72	-1.9
3,264,300	-		CCNA_03113	0.72	+1.3
3,264,300	-		CCNA_03113	0.72	+1.0
3,264,303	+		CCNA_03113	0.73	-1.4
3,264,305	-		CCNA_03113	0.73	+0.3
3,264,336	+		CCNA_03113	0.77	-3.0
3,264,344	-		CCNA_03113	0.78	+1.0
3,264,344	-				+2.6
3,264,347	+		CCNA_03113	0.79	-0.8
3,264,353	+		CCNA_03113	0.80	-1.8
3,264,360	-		CCNA_03113	0.81	+0.4
3,264,360	-		CCNA_03113	0.81	+2.6
3,264,360	-		CCNA_03113	0.81	+0.9
3,264,361	-		CCNA_03113	0.81	+0.1
3,264,361	-		CCNA_03113	0.81	+0.4
3,264,361	-		CCNA_03113	0.81	+2.1
3,264,361	-		CCNA_03113	0.81	+0.8
3,264,366	-		CCNA_03113	0.81	+0.3
3,264,412	-		CCNA_03113	0.88	+1.7
3,264,428	+				-1.8
3,264,428	+				-1.2
3,264,465	+				+0.2
3,264,493	-				+1.4
3,264,536	+				+1.6
3,264,540	+				-1.0
3,264,554	-				+0.4
3,264,623	-		CCNA_03114	0.25	+3.6
3,264,625	-		CCNA_03114	0.27	+1.3
3,264,648	-		CCNA_03114	0.40	+0.2
3,264,648	-		CCNA_03114	0.40	+0.3
3,264,657	+		CCNA_03114	0.45	+1.7
3,264,657	+		CCNA_03114	0.45	+1.0
3,264,662	+		CCNA_03114	0.47	+1.4
3,264,665	+		CCNA_03114	0.49	+0.6
3,264,670	-		CCNA_03114	0.52	-1.2
3,264,771	-				-1.9
3,264,778	+				+0.6
3,264,786	-				-2.9
3,264,920	+		CCNA_03115	0.13	-1.4
3,265,011	+		CCNA_03115	0.22	-1.0
3,265,012	+		CCNA_03115	0.22	+0.2
3,265,046	+		CCNA_03115	0.26	-2.8
3,265,066	+		CCNA_03115	0.28	-2.0
3,265,066	+		CCNA_03115	0.28	+0.1
3,265,115	+		CCNA_03115	0.32	-1.4
3,265,181	-		CCNA_03115	0.39	-0.4
3,265,191	+		CCNA_03115	0.40	-1.6
3,265,191	+		CCNA_03115	0.40	+1.3
3,265,191	+		CCNA_03115	0.40	-1.0
3,265,201	+		CCNA_03115	0.41	-0.7
3,265,221	+		CCNA_03115	0.43	-1.2
3,265,307	-		CCNA_03115	0.51	-1.4
3,265,309	+		CCNA_03115	0.52	-0.2
3,265,359	+		CCNA_03115	0.57	-1.2
3,265,367	+		CCNA_03115	0.57	-1.0
3,265,418	+		CCNA_03115	0.62	-0.0
3,265,453	+		CCNA_03115	0.66	-2.0
3,265,458	+		CCNA_03115	0.66	-2.4
3,265,458	+		CCNA_03115	0.66	-0.8
3,265,458	+		CCNA_03115	0.66	-1.2