Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15210

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
3,826,092	-		CA265_RS15205	0.28	-0.4
3,826,110	+		CA265_RS15205	0.30	-1.1
3,826,118	+		CA265_RS15205	0.31	-2.2
3,826,122	-		CA265_RS15205	0.31	-1.1
3,826,193	-		CA265_RS15205	0.37	-1.5
3,826,234	+		CA265_RS15205	0.41	-0.9
3,826,271	-		CA265_RS15205	0.44	-0.9
3,826,289	-		CA265_RS15205	0.46	+0.0
3,826,308	+		CA265_RS15205	0.47	-1.4
3,826,309	-		CA265_RS15205	0.48	-0.2
3,826,309	-		CA265_RS15205	0.48	-0.1
3,826,311	-		CA265_RS15205	0.48	-1.3
3,826,426	+		CA265_RS15205	0.58	-0.8
3,826,521	-		CA265_RS15205	0.66	-0.0
3,826,591	+		CA265_RS15205	0.72	-0.6
3,826,591	+		CA265_RS15205	0.72	-0.9
3,826,592	-		CA265_RS15205	0.72	-1.9
3,826,771	+		CA265_RS15205	0.88	-0.8
3,826,772	-		CA265_RS15205	0.88	-0.7
3,826,830	-				-0.7
3,826,879	+				-1.5
3,826,964	+				-0.6
3,826,964	+				+0.0
3,826,965	-				-0.6
3,827,020	-				-0.2
3,827,031	+		CA265_RS15210	0.11	-0.5
3,827,032	-		CA265_RS15210	0.11	+0.3
3,827,076	-		CA265_RS15210	0.18	+0.2
3,827,082	-		CA265_RS15210	0.18	-0.6
3,827,153	+		CA265_RS15210	0.29	-0.6
3,827,223	+		CA265_RS15210	0.39	-0.4
3,827,251	+		CA265_RS15210	0.43	+0.6
3,827,292	+		CA265_RS15210	0.49	+0.5
3,827,349	+		CA265_RS15210	0.58	-1.0
3,827,508	-		CA265_RS15210	0.81	-0.5
3,827,625	+				+0.4
3,827,687	+				-0.2
3,827,705	-				+0.9
3,827,746	-				-0.2
3,827,797	-				+0.3
3,827,811	-				+0.7
3,827,858	-				-2.6
3,827,953	+		CA265_RS15215	0.14	+0.4
3,827,984	+		CA265_RS15215	0.16	+0.0
3,828,003	-		CA265_RS15215	0.18	-0.0
3,828,041	+		CA265_RS15215	0.21	-0.4
3,828,052	+		CA265_RS15215	0.22	-0.9
3,828,053	-		CA265_RS15215	0.22	+0.2
3,828,083	+		CA265_RS15215	0.24	-0.0
3,828,198	+		CA265_RS15215	0.33	-2.1
3,828,199	-		CA265_RS15215	0.33	-0.8
3,828,212	-		CA265_RS15215	0.34	-0.5
3,828,212	-		CA265_RS15215	0.34	-0.5
3,828,251	+		CA265_RS15215	0.37	-0.8
3,828,252	-		CA265_RS15215	0.37	-0.2
3,828,252	-		CA265_RS15215	0.37	-0.5
3,828,330	+		CA265_RS15215	0.43	-1.7
3,828,337	-		CA265_RS15215	0.44	-2.8
3,828,409	+		CA265_RS15215	0.49	-0.4
3,828,410	-		CA265_RS15215	0.49	-2.1
3,828,410	-		CA265_RS15215	0.49	+0.3
3,828,440	+		CA265_RS15215	0.51	-0.7
3,828,441	-		CA265_RS15215	0.51	-0.0
3,828,441	-				+1.4
3,828,464	-		CA265_RS15215	0.53	-0.3
3,828,464	-		CA265_RS15215	0.53	-0.7
3,828,464	-		CA265_RS15215	0.53	+0.6
3,828,484	+		CA265_RS15215	0.55	-0.4
3,828,485	-		CA265_RS15215	0.55	-0.6
3,828,521	+		CA265_RS15215	0.58	-1.7
3,828,522	-		CA265_RS15215	0.58	-0.1
3,828,548	-		CA265_RS15215	0.60	+0.1
3,828,549	+		CA265_RS15215	0.60	+0.5
3,828,549	+		CA265_RS15215	0.60	+1.4
3,828,550	-		CA265_RS15215	0.60	+1.8
3,828,550	-		CA265_RS15215	0.60	-0.8
3,828,568	+		CA265_RS15215	0.61	-0.3