Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15020

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
3,785,199	+		CA265_RS15015	0.18	-0.0
3,785,226	+		CA265_RS15015	0.20	-0.1
3,785,325	-		CA265_RS15015	0.29	-0.9
3,785,325	-		CA265_RS15015	0.29	-1.2
3,785,669	-		CA265_RS15015	0.58	+0.1
3,785,683	+		CA265_RS15015	0.59	-0.6
3,785,697	+		CA265_RS15015	0.60	-0.0
3,785,808	-		CA265_RS15015	0.70	-1.2
3,785,810	-		CA265_RS15015	0.70	-1.1
3,785,810	-		CA265_RS15015	0.70	-1.5
3,785,880	+		CA265_RS15015	0.76	-0.9
3,785,992	-		CA265_RS15015	0.86	-2.1
3,785,992	-		CA265_RS15015	0.86	-0.7
3,786,012	-		CA265_RS15015	0.87	-1.6
3,786,015	+		CA265_RS15015	0.88	-0.4
3,786,016	-		CA265_RS15015	0.88	-1.1
3,786,066	+				-0.6
3,786,067	-				-2.2
3,786,111	-				-0.9
3,786,119	-				-0.8
3,786,139	+				-0.8
3,786,252	+				-1.4
3,786,253	-				+0.8
3,786,255	-				+0.3
3,786,277	-				-0.3
3,786,305	+				+0.5
3,786,306	-				-0.1
3,786,323	+		CA265_RS15020	0.11	-0.2
3,786,356	-		CA265_RS15020	0.13	-0.3
3,786,371	+		CA265_RS15020	0.15	-0.5
3,786,391	-		CA265_RS15020	0.16	-1.8
3,786,466	-		CA265_RS15020	0.23	-1.0
3,786,466	-		CA265_RS15020	0.23	-0.5
3,786,467	+		CA265_RS15020	0.23	-0.3
3,786,473	-		CA265_RS15020	0.23	+0.0
3,786,503	-		CA265_RS15020	0.26	-1.7
3,786,511	+		CA265_RS15020	0.26	-0.6
3,786,603	-		CA265_RS15020	0.34	-0.2
3,786,662	+		CA265_RS15020	0.39	-0.1
3,786,663	-		CA265_RS15020	0.39	-0.9
3,786,698	+		CA265_RS15020	0.42	-0.2
3,786,698	+		CA265_RS15020	0.42	-0.6
3,786,699	-		CA265_RS15020	0.42	-0.2
3,786,732	+		CA265_RS15020	0.44	+0.1
3,786,842	+		CA265_RS15020	0.54	-0.3
3,786,847	-		CA265_RS15020	0.54	-0.3
3,786,874	-		CA265_RS15020	0.56	-0.9
3,786,876	+		CA265_RS15020	0.56	+0.4
3,786,877	-		CA265_RS15020	0.56	-1.6
3,786,877	-		CA265_RS15020	0.56	-1.4
3,786,940	+		CA265_RS15020	0.62	+0.4
3,787,044	+		CA265_RS15020	0.70	-1.2
3,787,045	-		CA265_RS15020	0.70	-0.3
3,787,045	-		CA265_RS15020	0.70	+0.7
3,787,048	+		CA265_RS15020	0.71	+0.1
3,787,194	+		CA265_RS15020	0.83	-0.1
3,787,243	+		CA265_RS15020	0.87	+0.4
3,787,244	-		CA265_RS15020	0.87	+0.2
3,787,244	-		CA265_RS15020	0.87	-1.0
3,787,405	-				-0.5
3,787,425	+				-0.6
3,787,454	-				+0.1
3,787,464	+				+0.7
3,787,467	+				+0.8