Experiment: R2A with Spectinomycin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03045 and CA265_RS03050 are separated by 24 nucleotides CA265_RS03050 and CA265_RS03055 are separated by 201 nucleotides
CA265_RS03045: CA265_RS03045 - hypothetical protein, at 756,625 to 757,551
_RS03045
CA265_RS03050: CA265_RS03050 - hypothetical protein, at 757,576 to 758,073
_RS03050
CA265_RS03055: CA265_RS03055 - two-component sensor histidine kinase, at 758,275 to 759,627
_RS03055
Position (kb) 757
758
759 Strain fitness (log2 ratio) -1
0
1
2 at 756.683 kb on - strand at 756.688 kb on - strand at 756.724 kb on - strand, within CA265_RS03045 at 756.756 kb on + strand, within CA265_RS03045 at 756.825 kb on + strand, within CA265_RS03045 at 756.851 kb on + strand, within CA265_RS03045 at 756.909 kb on + strand, within CA265_RS03045 at 756.917 kb on + strand, within CA265_RS03045 at 756.918 kb on - strand, within CA265_RS03045 at 756.918 kb on - strand, within CA265_RS03045 at 756.926 kb on + strand, within CA265_RS03045 at 756.973 kb on - strand, within CA265_RS03045 at 756.978 kb on + strand, within CA265_RS03045 at 756.978 kb on + strand, within CA265_RS03045 at 756.978 kb on + strand, within CA265_RS03045 at 756.982 kb on + strand, within CA265_RS03045 at 757.010 kb on - strand, within CA265_RS03045 at 757.055 kb on - strand, within CA265_RS03045 at 757.078 kb on + strand, within CA265_RS03045 at 757.137 kb on - strand, within CA265_RS03045 at 757.162 kb on - strand, within CA265_RS03045 at 757.183 kb on + strand, within CA265_RS03045 at 757.190 kb on + strand, within CA265_RS03045 at 757.191 kb on - strand, within CA265_RS03045 at 757.288 kb on + strand, within CA265_RS03045 at 757.344 kb on + strand, within CA265_RS03045 at 757.344 kb on + strand, within CA265_RS03045 at 757.345 kb on - strand, within CA265_RS03045 at 757.360 kb on - strand, within CA265_RS03045 at 757.451 kb on + strand, within CA265_RS03045 at 757.453 kb on + strand, within CA265_RS03045 at 757.454 kb on - strand, within CA265_RS03045 at 757.457 kb on - strand, within CA265_RS03045 at 757.464 kb on + strand at 757.465 kb on - strand at 757.468 kb on + strand at 757.518 kb on + strand at 757.519 kb on - strand at 757.519 kb on - strand at 757.521 kb on - strand at 757.521 kb on - strand at 757.707 kb on + strand, within CA265_RS03050 at 757.712 kb on + strand, within CA265_RS03050 at 757.713 kb on - strand, within CA265_RS03050 at 757.713 kb on - strand, within CA265_RS03050 at 757.716 kb on + strand, within CA265_RS03050 at 757.748 kb on + strand, within CA265_RS03050 at 757.803 kb on + strand, within CA265_RS03050 at 757.817 kb on + strand, within CA265_RS03050 at 757.931 kb on - strand, within CA265_RS03050 at 757.935 kb on + strand, within CA265_RS03050 at 757.936 kb on - strand, within CA265_RS03050 at 757.959 kb on + strand, within CA265_RS03050 at 758.060 kb on - strand at 758.079 kb on + strand at 758.080 kb on - strand at 758.200 kb on - strand at 758.200 kb on - strand at 758.207 kb on + strand at 758.230 kb on + strand at 758.231 kb on - strand at 758.277 kb on - strand at 758.338 kb on + strand at 758.343 kb on + strand at 758.353 kb on + strand at 758.365 kb on - strand at 758.380 kb on + strand at 758.380 kb on + strand at 758.394 kb on - strand at 758.427 kb on - strand, within CA265_RS03055 at 758.427 kb on - strand, within CA265_RS03055 at 758.440 kb on + strand, within CA265_RS03055 at 758.441 kb on - strand, within CA265_RS03055 at 758.442 kb on + strand, within CA265_RS03055 at 758.443 kb on - strand, within CA265_RS03055 at 758.452 kb on - strand, within CA265_RS03055 at 758.485 kb on + strand, within CA265_RS03055 at 758.503 kb on - strand, within CA265_RS03055 at 758.520 kb on + strand, within CA265_RS03055 at 758.523 kb on + strand, within CA265_RS03055 at 758.524 kb on - strand, within CA265_RS03055 at 758.554 kb on - strand, within CA265_RS03055 at 758.554 kb on - strand, within CA265_RS03055 at 758.571 kb on + strand, within CA265_RS03055 at 758.620 kb on + strand, within CA265_RS03055 at 758.621 kb on - strand, within CA265_RS03055 at 758.646 kb on + strand, within CA265_RS03055 at 758.647 kb on - strand, within CA265_RS03055 at 758.697 kb on + strand, within CA265_RS03055 at 758.725 kb on + strand, within CA265_RS03055 at 758.725 kb on + strand, within CA265_RS03055 at 758.793 kb on + strand, within CA265_RS03055 at 758.794 kb on - strand, within CA265_RS03055 at 758.800 kb on + strand, within CA265_RS03055 at 758.800 kb on + strand, within CA265_RS03055 at 758.896 kb on - strand, within CA265_RS03055 at 758.914 kb on + strand, within CA265_RS03055 at 758.914 kb on + strand, within CA265_RS03055 at 758.915 kb on - strand, within CA265_RS03055 at 758.937 kb on + strand, within CA265_RS03055 at 759.037 kb on + strand, within CA265_RS03055 at 759.038 kb on - strand, within CA265_RS03055 at 759.072 kb on + strand, within CA265_RS03055
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Spectinomycin 0.05 mg/ml remove 756,683 - +0.1 756,688 - +0.3 756,724 - CA265_RS03045 0.11 +0.2 756,756 + CA265_RS03045 0.14 +0.3 756,825 + CA265_RS03045 0.22 -0.3 756,851 + CA265_RS03045 0.24 +1.0 756,909 + CA265_RS03045 0.31 -0.2 756,917 + CA265_RS03045 0.31 +0.0 756,918 - CA265_RS03045 0.32 -0.1 756,918 - CA265_RS03045 0.32 +0.6 756,926 + CA265_RS03045 0.32 -0.2 756,973 - CA265_RS03045 0.38 +0.5 756,978 + CA265_RS03045 0.38 +0.2 756,978 + CA265_RS03045 0.38 +0.6 756,978 + CA265_RS03045 0.38 +1.0 756,982 + CA265_RS03045 0.39 +0.3 757,010 - CA265_RS03045 0.42 +0.1 757,055 - CA265_RS03045 0.46 +0.5 757,078 + CA265_RS03045 0.49 -1.3 757,137 - CA265_RS03045 0.55 +0.0 757,162 - CA265_RS03045 0.58 +0.7 757,183 + CA265_RS03045 0.60 +0.2 757,190 + CA265_RS03045 0.61 +0.6 757,191 - CA265_RS03045 0.61 +0.2 757,288 + CA265_RS03045 0.72 -0.8 757,344 + CA265_RS03045 0.78 -0.1 757,344 + CA265_RS03045 0.78 -0.5 757,345 - CA265_RS03045 0.78 +0.7 757,360 - CA265_RS03045 0.79 -0.8 757,451 + CA265_RS03045 0.89 +0.1 757,453 + CA265_RS03045 0.89 +0.0 757,454 - CA265_RS03045 0.89 +0.5 757,457 - CA265_RS03045 0.90 +0.4 757,464 + -0.3 757,465 - +0.4 757,468 + +0.1 757,518 + +0.4 757,519 - -0.2 757,519 - -0.4 757,521 - -0.7 757,521 - -0.5 757,707 + CA265_RS03050 0.26 -0.6 757,712 + CA265_RS03050 0.27 -0.1 757,713 - CA265_RS03050 0.28 +1.2 757,713 - CA265_RS03050 0.28 +2.0 757,716 + CA265_RS03050 0.28 +0.4 757,748 + CA265_RS03050 0.35 +0.3 757,803 + CA265_RS03050 0.46 +0.8 757,817 + CA265_RS03050 0.48 -0.5 757,931 - CA265_RS03050 0.71 -0.6 757,935 + CA265_RS03050 0.72 -0.5 757,936 - CA265_RS03050 0.72 +0.6 757,959 + CA265_RS03050 0.77 +0.5 758,060 - +1.2 758,079 + +0.2 758,080 - +0.8 758,200 - +0.8 758,200 - +1.4 758,207 + -0.3 758,230 + -0.3 758,231 - -0.2 758,277 - +0.8 758,338 + +0.1 758,343 + +0.2 758,353 + +0.8 758,365 - +0.4 758,380 + +0.7 758,380 + -0.1 758,394 - -0.6 758,427 - CA265_RS03055 0.11 +0.1 758,427 - CA265_RS03055 0.11 +0.5 758,440 + CA265_RS03055 0.12 -0.5 758,441 - CA265_RS03055 0.12 +0.7 758,442 + CA265_RS03055 0.12 +1.7 758,443 - CA265_RS03055 0.12 +0.8 758,452 - CA265_RS03055 0.13 -0.4 758,485 + CA265_RS03055 0.16 +0.1 758,503 - CA265_RS03055 0.17 +0.2 758,520 + CA265_RS03055 0.18 +0.7 758,523 + CA265_RS03055 0.18 -0.6 758,524 - CA265_RS03055 0.18 +0.5 758,554 - CA265_RS03055 0.21 +0.8 758,554 - CA265_RS03055 0.21 +0.8 758,571 + CA265_RS03055 0.22 -0.1 758,620 + CA265_RS03055 0.25 +0.1 758,621 - CA265_RS03055 0.26 +0.9 758,646 + CA265_RS03055 0.27 +0.5 758,647 - CA265_RS03055 0.27 +1.2 758,697 + CA265_RS03055 0.31 -0.8 758,725 + CA265_RS03055 0.33 +0.1 758,725 + CA265_RS03055 0.33 +0.4 758,793 + CA265_RS03055 0.38 +1.6 758,794 - CA265_RS03055 0.38 -0.2 758,800 + CA265_RS03055 0.39 -0.1 758,800 + CA265_RS03055 0.39 +0.3 758,896 - CA265_RS03055 0.46 -0.5 758,914 + CA265_RS03055 0.47 +0.2 758,914 + CA265_RS03055 0.47 -0.0 758,915 - CA265_RS03055 0.47 +0.5 758,937 + CA265_RS03055 0.49 +0.9 759,037 + CA265_RS03055 0.56 +0.3 759,038 - CA265_RS03055 0.56 -0.3 759,072 + CA265_RS03055 0.59 +0.2
Or see this region's nucleotide sequence