Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2896 and Ac3H11_2897 are separated by 45 nucleotides Ac3H11_2897 and Ac3H11_2898 are separated by 11 nucleotides
Ac3H11_2896 - Putative extracytoplasmic tricarboxylate-binding receptor of a tripartite transporter, in cluster with DUF1446, at 1,207,071 to 1,208,063
_2896
Ac3H11_2897 - Small uncharacterized protein Bpro_4170, at 1,208,109 to 1,208,480
_2897
Ac3H11_2898 - Protein of unknown function DUF1446, at 1,208,492 to 1,209,862
_2898
Position (kb) 1208
1209 Strain fitness (log2 ratio) -1
0
1
2
3 at 1207.266 kb on - strand, within Ac3H11_2896 at 1207.266 kb on - strand, within Ac3H11_2896 at 1207.266 kb on - strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.279 kb on + strand, within Ac3H11_2896 at 1207.295 kb on - strand, within Ac3H11_2896 at 1207.307 kb on - strand, within Ac3H11_2896 at 1207.493 kb on - strand, within Ac3H11_2896 at 1207.630 kb on + strand, within Ac3H11_2896 at 1207.631 kb on - strand, within Ac3H11_2896 at 1207.631 kb on - strand, within Ac3H11_2896 at 1207.711 kb on + strand, within Ac3H11_2896 at 1207.727 kb on - strand, within Ac3H11_2896 at 1207.727 kb on - strand, within Ac3H11_2896 at 1207.777 kb on + strand, within Ac3H11_2896 at 1208.082 kb on + strand at 1208.111 kb on - strand at 1208.165 kb on + strand, within Ac3H11_2897 at 1208.165 kb on + strand, within Ac3H11_2897 at 1208.166 kb on - strand, within Ac3H11_2897 at 1208.180 kb on - strand, within Ac3H11_2897 at 1208.443 kb on + strand at 1208.463 kb on - strand at 1208.463 kb on - strand at 1208.471 kb on + strand at 1208.471 kb on + strand at 1208.610 kb on + strand at 1208.610 kb on + strand at 1208.865 kb on + strand, within Ac3H11_2898 at 1209.052 kb on - strand, within Ac3H11_2898 at 1209.083 kb on - strand, within Ac3H11_2898 at 1209.187 kb on - strand, within Ac3H11_2898 at 1209.204 kb on + strand, within Ac3H11_2898 at 1209.204 kb on + strand, within Ac3H11_2898 at 1209.205 kb on - strand, within Ac3H11_2898
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 1,207,266 - Ac3H11_2896 0.20 +0.0 1,207,266 - Ac3H11_2896 0.20 +2.0 1,207,266 - Ac3H11_2896 0.20 +0.1 1,207,279 + Ac3H11_2896 0.21 +0.8 1,207,279 + Ac3H11_2896 0.21 +0.0 1,207,279 + Ac3H11_2896 0.21 -0.6 1,207,279 + Ac3H11_2896 0.21 -0.7 1,207,295 - Ac3H11_2896 0.23 -0.1 1,207,307 - Ac3H11_2896 0.24 +0.9 1,207,493 - Ac3H11_2896 0.42 -0.4 1,207,630 + Ac3H11_2896 0.56 -0.1 1,207,631 - Ac3H11_2896 0.56 +0.1 1,207,631 - Ac3H11_2896 0.56 +0.6 1,207,711 + Ac3H11_2896 0.64 -0.2 1,207,727 - Ac3H11_2896 0.66 +0.0 1,207,727 - Ac3H11_2896 0.66 -0.1 1,207,777 + Ac3H11_2896 0.71 +0.3 1,208,082 + -0.1 1,208,111 - +0.7 1,208,165 + Ac3H11_2897 0.15 -0.7 1,208,165 + Ac3H11_2897 0.15 -1.5 1,208,166 - Ac3H11_2897 0.15 -0.4 1,208,180 - Ac3H11_2897 0.19 -0.5 1,208,443 + +1.4 1,208,463 - -0.1 1,208,463 - -0.0 1,208,471 + -0.0 1,208,471 + -0.4 1,208,610 + +1.7 1,208,610 + +0.1 1,208,865 + Ac3H11_2898 0.27 -0.1 1,209,052 - Ac3H11_2898 0.41 -0.2 1,209,083 - Ac3H11_2898 0.43 +3.2 1,209,187 - Ac3H11_2898 0.51 +0.6 1,209,204 + Ac3H11_2898 0.52 -0.4 1,209,204 + Ac3H11_2898 0.52 -1.4 1,209,205 - Ac3H11_2898 0.52 +0.8
Or see this region's nucleotide sequence