Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01795 and ABZR86_RS01800 are separated by 0 nucleotides ABZR86_RS01800 and ABZR86_RS01805 overlap by 1 nucleotides
ABZR86_RS01795: ABZR86_RS01795 - GNAT family N-acetyltransferase, at 388,265 to 389,449
_RS01795
ABZR86_RS01800: ABZR86_RS01800 - DsbA family protein, at 389,450 to 390,109
_RS01800
ABZR86_RS01805: ABZR86_RS01805 - thioredoxin-disulfide reductase, at 390,109 to 391,068
_RS01805
Position (kb) 389
390
391 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.483 kb on + strand, within ABZR86_RS01795 at 388.484 kb on - strand, within ABZR86_RS01795 at 388.484 kb on - strand, within ABZR86_RS01795 at 388.484 kb on - strand, within ABZR86_RS01795 at 388.500 kb on + strand, within ABZR86_RS01795 at 388.501 kb on - strand, within ABZR86_RS01795 at 388.503 kb on + strand, within ABZR86_RS01795 at 388.504 kb on - strand, within ABZR86_RS01795 at 388.504 kb on - strand, within ABZR86_RS01795 at 388.560 kb on + strand, within ABZR86_RS01795 at 388.561 kb on - strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.722 kb on + strand, within ABZR86_RS01795 at 388.723 kb on - strand, within ABZR86_RS01795 at 388.723 kb on - strand, within ABZR86_RS01795 at 388.723 kb on - strand, within ABZR86_RS01795 at 388.878 kb on + strand, within ABZR86_RS01795 at 389.092 kb on - strand, within ABZR86_RS01795 at 389.118 kb on + strand, within ABZR86_RS01795 at 389.118 kb on + strand, within ABZR86_RS01795 at 389.119 kb on - strand, within ABZR86_RS01795 at 389.119 kb on - strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.121 kb on + strand, within ABZR86_RS01795 at 389.122 kb on - strand, within ABZR86_RS01795 at 389.122 kb on - strand, within ABZR86_RS01795 at 389.122 kb on - strand, within ABZR86_RS01795 at 389.200 kb on - strand, within ABZR86_RS01795 at 389.235 kb on + strand, within ABZR86_RS01795 at 389.739 kb on + strand, within ABZR86_RS01800 at 389.739 kb on + strand, within ABZR86_RS01800 at 389.772 kb on + strand, within ABZR86_RS01800 at 389.832 kb on + strand, within ABZR86_RS01800 at 389.833 kb on - strand, within ABZR86_RS01800 at 389.871 kb on + strand, within ABZR86_RS01800 at 389.871 kb on + strand, within ABZR86_RS01800 at 389.871 kb on + strand, within ABZR86_RS01800 at 389.872 kb on - strand, within ABZR86_RS01800 at 389.872 kb on - strand, within ABZR86_RS01800 at 390.051 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.081 kb on + strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 390.082 kb on - strand at 391.073 kb on - strand at 391.075 kb on - strand at 391.088 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 388,483 + ABZR86_RS01795 0.18 +0.3 388,483 + ABZR86_RS01795 0.18 -0.2 388,483 + ABZR86_RS01795 0.18 +0.3 388,483 + ABZR86_RS01795 0.18 -0.2 388,484 - ABZR86_RS01795 0.18 -0.1 388,484 - ABZR86_RS01795 0.18 +0.1 388,484 - ABZR86_RS01795 0.18 -0.1 388,500 + ABZR86_RS01795 0.20 +0.4 388,501 - ABZR86_RS01795 0.20 -0.9 388,503 + ABZR86_RS01795 0.20 -0.2 388,504 - ABZR86_RS01795 0.20 -0.0 388,504 - ABZR86_RS01795 0.20 +0.4 388,560 + ABZR86_RS01795 0.25 -0.1 388,561 - ABZR86_RS01795 0.25 +0.2 388,722 + ABZR86_RS01795 0.39 +0.8 388,722 + ABZR86_RS01795 0.39 -0.1 388,722 + ABZR86_RS01795 0.39 +0.3 388,722 + ABZR86_RS01795 0.39 +0.5 388,723 - ABZR86_RS01795 0.39 +0.4 388,723 - ABZR86_RS01795 0.39 +0.2 388,723 - ABZR86_RS01795 0.39 +0.2 388,878 + ABZR86_RS01795 0.52 -0.2 389,092 - ABZR86_RS01795 0.70 -0.3 389,118 + ABZR86_RS01795 0.72 +0.0 389,118 + ABZR86_RS01795 0.72 +0.0 389,119 - ABZR86_RS01795 0.72 +0.6 389,119 - ABZR86_RS01795 0.72 +0.2 389,121 + ABZR86_RS01795 0.72 +0.1 389,121 + ABZR86_RS01795 0.72 -0.7 389,121 + ABZR86_RS01795 0.72 -0.2 389,121 + ABZR86_RS01795 0.72 +0.6 389,122 - ABZR86_RS01795 0.72 +0.3 389,122 - ABZR86_RS01795 0.72 +0.6 389,122 - ABZR86_RS01795 0.72 +0.2 389,200 - ABZR86_RS01795 0.79 +1.7 389,235 + ABZR86_RS01795 0.82 -0.4 389,739 + ABZR86_RS01800 0.44 -0.2 389,739 + ABZR86_RS01800 0.44 +0.6 389,772 + ABZR86_RS01800 0.49 +0.2 389,832 + ABZR86_RS01800 0.58 +0.4 389,833 - ABZR86_RS01800 0.58 -0.7 389,871 + ABZR86_RS01800 0.64 +0.1 389,871 + ABZR86_RS01800 0.64 +0.3 389,871 + ABZR86_RS01800 0.64 +0.3 389,872 - ABZR86_RS01800 0.64 +0.5 389,872 - ABZR86_RS01800 0.64 +0.4 390,051 + -0.1 390,081 + +0.1 390,081 + +0.9 390,081 + -0.6 390,081 + -1.0 390,081 + +0.5 390,081 + +0.2 390,081 + +0.2 390,081 + -0.0 390,081 + -0.4 390,082 - +0.1 390,082 - -0.1 390,082 - -3.3 390,082 - -0.3 390,082 - +0.2 390,082 - +0.5 390,082 - -0.3 390,082 - +0.2 390,082 - +0.2 390,082 - -2.4 390,082 - +0.2 390,082 - -0.1 390,082 - -0.1 390,082 - +0.3 390,082 - -0.0 391,073 - -0.3 391,075 - +0.1 391,088 + -3.0
Or see this region's nucleotide sequence