Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002320

Experiment: Adenosine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Adenosine (C)
2,604,945	+		ABIE53_002319	0.36	-0.6
2,604,946	-		ABIE53_002319	0.36	-0.9
2,604,946	-		ABIE53_002319	0.36	-0.8
2,605,100	-		ABIE53_002319	0.57	+0.7
2,605,101	+		ABIE53_002319	0.57	-0.9
2,605,101	+		ABIE53_002319	0.57	+0.9
2,605,101	+		ABIE53_002319	0.57	+0.9
2,605,101	+		ABIE53_002319	0.57	-0.3
2,605,102	-		ABIE53_002319	0.57	-0.5
2,605,102	-		ABIE53_002319	0.57	+0.3
2,605,163	+		ABIE53_002319	0.65	+0.9
2,605,163	+		ABIE53_002319	0.65	-1.0
2,605,301	+		ABIE53_002319	0.83	-1.1
2,605,301	+		ABIE53_002319	0.83	-1.4
2,605,301	+		ABIE53_002319	0.83	-1.4
2,605,301	+		ABIE53_002319	0.83	-0.4
2,605,301	+		ABIE53_002319	0.83	-1.5
2,605,301	+		ABIE53_002319	0.83	+0.1
2,605,302	-		ABIE53_002319	0.83	-1.0
2,605,302	-		ABIE53_002319	0.83	-0.1
2,605,323	+		ABIE53_002319	0.86	-0.7
2,605,323	+		ABIE53_002319	0.86	-0.7
2,605,324	-		ABIE53_002319	0.86	-0.3
2,605,324	-		ABIE53_002319	0.86	+0.6
2,605,324	-		ABIE53_002319	0.86	+0.1
2,605,632	+				-0.2
2,605,633	-				-0.8
2,605,633	-				-0.2
2,605,633	-				-1.4
2,605,654	+				-0.3
2,605,654	+				-0.4
2,605,704	+				+0.1
2,605,704	+				+0.9
2,605,705	-				+0.4
2,605,705	-				+0.8
2,605,705	-				-0.1
2,605,773	+				-0.5
2,605,773	+				-0.6
2,605,773	+				+0.3
2,605,773	+				-1.0
2,605,773	+				-0.4
2,605,774	-				-0.3
2,605,774	-				+0.6
2,605,774	-				-0.4
2,605,774	-				-0.1
2,605,774	-				-0.2
2,605,775	+				-0.1
2,605,775	+				-0.1
2,605,775	+				+0.8
2,605,775	+				+0.3
2,605,775	+				+0.4
2,605,775	+				-0.5
2,605,775	+				+0.4
2,605,776	-				-0.8
2,605,776	-				-0.3
2,605,776	-				-1.1
2,605,776	-				-0.7
2,606,678	+		ABIE53_002320	0.43	+0.3
2,606,679	-		ABIE53_002320	0.43	-0.5
2,606,925	+		ABIE53_002320	0.57	-0.6
2,606,970	+		ABIE53_002320	0.59	-0.6
2,606,970	+		ABIE53_002320	0.59	-0.3
2,606,970	+		ABIE53_002320	0.59	-1.0
2,606,971	-		ABIE53_002320	0.59	+0.7
2,606,971	-		ABIE53_002320	0.59	-0.9
2,606,971	-		ABIE53_002320	0.59	+1.3
2,606,971	-		ABIE53_002320	0.59	+2.0
2,607,094	+		ABIE53_002320	0.66	-1.7
2,607,094	+		ABIE53_002320	0.66	+0.4
2,607,094	+		ABIE53_002320	0.66	-1.2
2,607,094	+		ABIE53_002320	0.66	-0.6
2,607,094	+		ABIE53_002320	0.66	+0.6
2,607,094	+		ABIE53_002320	0.66	-0.5
2,607,094	+		ABIE53_002320	0.66	-0.0
2,607,094	+		ABIE53_002320	0.66	-2.6
2,607,095	-		ABIE53_002320	0.66	+0.9
2,607,095	-		ABIE53_002320	0.66	-1.1
2,607,155	+		ABIE53_002320	0.70	+0.6
2,607,155	+		ABIE53_002320	0.70	-0.3
2,607,155	+		ABIE53_002320	0.70	-0.8
2,607,155	+		ABIE53_002320	0.70	-1.8
2,607,155	+		ABIE53_002320	0.70	-1.0
2,607,155	+		ABIE53_002320	0.70	-0.0
2,607,155	+		ABIE53_002320	0.70	-1.1
2,607,155	+		ABIE53_002320	0.70	-1.2
2,607,155	+		ABIE53_002320	0.70	+0.5
2,607,155	+		ABIE53_002320	0.70	+0.3
2,607,155	+		ABIE53_002320	0.70	-0.8
2,607,156	-		ABIE53_002320	0.70	+1.0
2,607,156	-		ABIE53_002320	0.70	+0.8
2,607,156	-		ABIE53_002320	0.70	+0.1
2,607,156	-		ABIE53_002320	0.70	+0.1
2,607,156	-		ABIE53_002320	0.70	-1.0
2,607,156	-		ABIE53_002320	0.70	-1.3
2,607,156	-		ABIE53_002320	0.70	-0.5
2,607,156	-		ABIE53_002320	0.70	-0.4
2,607,156	-		ABIE53_002320	0.70	-0.0
2,607,156	-		ABIE53_002320	0.70	-0.1
2,607,182	-		ABIE53_002320	0.71	+0.3
2,607,208	+		ABIE53_002320	0.72	-0.6
2,607,209	-		ABIE53_002320	0.72	-0.4
2,607,209	-		ABIE53_002320	0.72	+0.2
2,607,247	+		ABIE53_002320	0.75	+0.3
2,607,247	+		ABIE53_002320	0.75	-0.7
2,607,248	-		ABIE53_002320	0.75	-0.5
2,607,248	-		ABIE53_002320	0.75	-1.0
2,607,248	-		ABIE53_002320	0.75	-1.1
2,607,248	-		ABIE53_002320	0.75	-0.3
2,607,404	+		ABIE53_002320	0.83	+0.2
2,607,404	+		ABIE53_002320	0.83	+0.0
2,607,404	+		ABIE53_002320	0.83	-1.4
2,607,404	+		ABIE53_002320	0.83	+0.2
2,607,404	+		ABIE53_002320	0.83	+0.3
2,607,405	-		ABIE53_002320	0.83	+0.8
2,607,405	-		ABIE53_002320	0.83	+1.1
2,607,405	-		ABIE53_002320	0.83	-0.1
2,607,405	-		ABIE53_002320	0.83	+0.5
2,607,405	-		ABIE53_002320	0.83	-0.0
2,607,405	-		ABIE53_002320	0.83	+1.9
2,607,405	-		ABIE53_002320	0.83	-0.4
2,607,405	-		ABIE53_002320	0.83	-1.6
2,607,405	-		ABIE53_002320	0.83	+0.6
2,607,405	-		ABIE53_002320	0.83	-0.7
2,607,405	-		ABIE53_002320	0.83	+0.0
2,607,406	+		ABIE53_002320	0.83	+0.3
2,607,406	+		ABIE53_002320	0.83	+1.0
2,607,406	+		ABIE53_002320	0.83	+0.9
2,607,406	+		ABIE53_002320	0.83	+1.3
2,607,406	+		ABIE53_002320	0.83	+0.3
2,607,406	+		ABIE53_002320	0.83	-0.7
2,607,406	+		ABIE53_002320	0.83	-0.3
2,607,407	-		ABIE53_002320	0.83	-0.8
2,607,407	-		ABIE53_002320	0.83	-0.9
2,607,407	-		ABIE53_002320	0.83	+1.5
2,607,407	-		ABIE53_002320	0.83	+0.3
2,607,407	-		ABIE53_002320	0.83	+0.1
2,607,529	+				-1.5
2,607,529	+				-1.0
2,607,529	+				+0.8
2,607,530	-				-0.2
2,607,530	-				-0.6
2,607,589	+				+0.3
2,607,589	+				-1.2
2,607,590	-				-0.8
2,607,590	-				-0.3
2,607,590	-				+0.3
2,607,710	+				+0.4
2,607,710	+				-0.3
2,607,710	+				+1.2
2,607,710	+				+0.1
2,607,710	+				-0.8
2,607,710	+				-0.4
2,607,710	+				-1.8
2,607,710	+				-1.2
2,607,710	+				-1.4
2,607,711	-				+0.3
2,607,711	-				-0.3
2,607,711	-				-1.1
2,607,711	-				-0.4
2,607,711	-				+0.9
2,607,711	-				-1.1
2,607,711	-				-1.3
2,607,711	-				-0.9
2,607,711	-				-0.3
2,607,711	-				+1.0
2,607,747	+				+0.6
2,607,747	+				+0.6
2,607,747	+				-0.1
2,607,747	+				-1.1
2,607,747	+				-1.3
2,607,747	+				-0.4
2,607,748	-				-0.7
2,607,748	-				-0.9
2,607,748	-				-0.6
2,607,748	-				-0.9
2,607,783	+				+0.1
2,607,783	+				-0.6
2,607,783	+				+0.6
2,607,783	+				-0.0
2,607,784	-				-0.4
2,607,784	-				-0.7
2,607,847	+				+0.4
2,607,848	-				+0.3
2,607,848	-				-0.6
2,607,849	+				+0.3
2,607,849	+				-0.3
2,607,887	+				+0.9
2,607,888	-				-1.1
2,607,926	+				-0.6
2,607,927	-				-0.6
2,607,927	-				+1.1
2,608,086	+				-2.9
2,608,161	+				+1.1
2,608,161	+				-1.0
2,608,161	+				-0.4
2,608,162	-				-0.9
2,608,162	-				+1.6
2,608,162	-				+0.3
2,608,162	-				-1.5
2,608,162	-				-0.4
2,608,210	+				-0.0
2,608,210	+				+0.1
2,608,210	+				-1.1
2,608,210	+				-1.0
2,608,210	+				-0.5
2,608,210	+				+0.1
2,608,211	-				+1.0
2,608,211	-				+0.6
2,608,355	+		ABIE53_002321	0.16	-1.0
2,608,355	+		ABIE53_002321	0.16	-1.7
2,608,355	+		ABIE53_002321	0.16	-1.5
2,608,355	+		ABIE53_002321	0.16	+1.3
2,608,356	-		ABIE53_002321	0.16	-0.1
2,608,356	-		ABIE53_002321	0.16	-3.4
2,608,356	-		ABIE53_002321	0.16	-0.8
2,608,356	-		ABIE53_002321	0.16	-1.4
2,608,356	-		ABIE53_002321	0.16	-2.9
2,608,373	+		ABIE53_002321	0.18	-1.6
2,608,402	+		ABIE53_002321	0.21	-2.9
2,608,402	+		ABIE53_002321	0.21	-4.3
2,608,403	-		ABIE53_002321	0.21	-0.3
2,608,403	-		ABIE53_002321	0.21	-1.4
2,608,403	-		ABIE53_002321	0.21	-1.6
2,608,576	+		ABIE53_002321	0.40	+0.1
2,608,577	-		ABIE53_002321	0.40	-1.5
2,608,577	-		ABIE53_002321	0.40	+1.9