Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03842

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,007,909	+				+0.2
4,007,912	-				-1.1
4,007,912	-				-0.2
4,007,930	+				-0.9
4,007,943	-		CCNA_03841	0.10	-0.9
4,007,950	-		CCNA_03841	0.11	+0.1
4,007,960	+		CCNA_03841	0.12	-0.6
4,007,967	-		CCNA_03841	0.12	-0.5
4,008,000	+		CCNA_03841	0.16	-1.8
4,008,019	+		CCNA_03841	0.18	-1.8
4,008,024	+		CCNA_03841	0.18	-1.3
4,008,084	+		CCNA_03841	0.25	-3.6
4,008,084	+		CCNA_03841	0.25	-2.0
4,008,092	-		CCNA_03841	0.26	-0.2
4,008,098	+		CCNA_03841	0.26	-2.6
4,008,104	-		CCNA_03841	0.27	-1.8
4,008,131	+		CCNA_03841	0.30	-2.8
4,008,152	+		CCNA_03841	0.32	+0.7
4,008,160	-		CCNA_03841	0.33	+0.1
4,008,163	+		CCNA_03841	0.33	+0.1
4,008,168	+		CCNA_03841	0.33	-2.1
4,008,168	+		CCNA_03841	0.33	-1.9
4,008,173	+		CCNA_03841	0.34	+0.7
4,008,176	-		CCNA_03841	0.34	-2.9
4,008,176	-		CCNA_03841	0.34	-1.6
4,008,181	-		CCNA_03841	0.35	-1.4
4,008,190	-		CCNA_03841	0.36	-0.6
4,008,196	-		CCNA_03841	0.36	-2.9
4,008,197	-		CCNA_03841	0.36	-1.0
4,008,205	+		CCNA_03841	0.37	-1.4
4,008,228	+		CCNA_03841	0.40	-1.2
4,008,228	+		CCNA_03841	0.40	-1.3
4,008,228	+		CCNA_03841	0.40	-0.8
4,008,228	+		CCNA_03841	0.40	-1.6
4,008,228	+		CCNA_03841	0.40	-1.2
4,008,234	-		CCNA_03841	0.40	-2.2
4,008,234	-		CCNA_03841	0.40	-1.1
4,008,270	+		CCNA_03841	0.44	+0.3
4,008,277	+		CCNA_03841	0.45	-1.6
4,008,278	-				+0.7
4,008,278	-		CCNA_03841	0.45	-2.2
4,008,310	+		CCNA_03841	0.48	+1.7
4,008,315	+		CCNA_03841	0.49	-2.4
4,008,318	-		CCNA_03841	0.49	-0.2
4,008,320	+		CCNA_03841	0.49	-0.9
4,008,320	+		CCNA_03841	0.49	-1.0
4,008,327	+		CCNA_03841	0.50	-1.8
4,008,327	-		CCNA_03841	0.50	-1.7
4,008,328	-		CCNA_03841	0.50	-2.3
4,008,328	-		CCNA_03841	0.50	+0.1
4,008,335	-		CCNA_03841	0.51	-2.3
4,008,360	+		CCNA_03841	0.53	-0.1
4,008,360	+		CCNA_03841	0.53	-2.3
4,008,360	+		CCNA_03841	0.53	+1.3
4,008,361	+		CCNA_03841	0.54	-1.0
4,008,361	+		CCNA_03841	0.54	-1.3
4,008,361	+		CCNA_03841	0.54	+4.3
4,008,361	+		CCNA_03841	0.54	-2.1
4,008,361	+		CCNA_03841	0.54	+1.7
4,008,368	-		CCNA_03841	0.54	-1.9
4,008,368	-		CCNA_03841	0.54	-2.2
4,008,368	-		CCNA_03841	0.54	-0.7
4,008,368	-		CCNA_03841	0.54	+0.8
4,008,369	-		CCNA_03841	0.54	-2.5
4,008,369	-		CCNA_03841	0.54	+2.7
4,008,369	-		CCNA_03841	0.54	-1.0
4,008,374	-		CCNA_03841	0.55	+0.1
4,008,393	+		CCNA_03841	0.57	-0.8
4,008,398	+		CCNA_03841	0.57	+2.9
4,008,398	+		CCNA_03841	0.57	-3.0
4,008,406	-		CCNA_03841	0.58	-1.0
4,008,406	-		CCNA_03841	0.58	+2.3
4,008,406	-		CCNA_03841	0.58	-3.7
4,008,406	-		CCNA_03841	0.58	-2.3
4,008,408	+		CCNA_03841	0.58	-1.5
4,008,408	+		CCNA_03841	0.58	-1.9
4,008,408	+		CCNA_03841	0.58	-0.4
4,008,416	-		CCNA_03841	0.59	+2.7
4,008,416	-		CCNA_03841	0.59	+0.7
4,008,416	-		CCNA_03841	0.59	-0.9
4,008,421	-		CCNA_03841	0.60	-1.3
4,008,433	+		CCNA_03841	0.61	-1.3
4,008,453	+		CCNA_03841	0.63	-1.8
4,008,453	+		CCNA_03841	0.63	+0.4
4,008,453	+		CCNA_03841	0.63	-0.5
4,008,476	+		CCNA_03841	0.66	-1.0
4,008,486	-		CCNA_03841	0.67	-2.6
4,008,507	-		CCNA_03841	0.69	-0.3
4,008,532	+		CCNA_03841	0.71	-2.5
4,008,532	+		CCNA_03841	0.71	-1.8
4,008,532	+		CCNA_03841	0.71	-0.3
4,008,532	+		CCNA_03841	0.71	-2.5
4,008,532	+		CCNA_03841	0.71	-1.1
4,008,532	+		CCNA_03841	0.71	-0.2
4,008,540	-		CCNA_03841	0.72	+1.9
4,008,540	-		CCNA_03841	0.72	+1.7
4,008,540	-		CCNA_03841	0.72	-0.5
4,008,540	-		CCNA_03841	0.72	-1.8
4,008,540	-		CCNA_03841	0.72	-1.1
4,008,540	-		CCNA_03841	0.72	+0.6
4,008,540	-		CCNA_03841	0.72	-0.6
4,008,540	-		CCNA_03841	0.72	-0.2
4,008,540	-		CCNA_03841	0.72	+0.9
4,008,540	-		CCNA_03841	0.72	+0.7
4,008,540	-		CCNA_03841	0.72	-0.5
4,008,540	-		CCNA_03841	0.72	+0.6
4,008,550	+		CCNA_03841	0.73	-0.8
4,008,550	+		CCNA_03841	0.73	-0.9
4,008,558	-				+0.7
4,008,558	-		CCNA_03841	0.74	+3.7
4,008,558	-		CCNA_03841	0.74	+1.5
4,008,558	-		CCNA_03841	0.74	-1.1
4,008,559	+		CCNA_03841	0.74	+0.3
4,008,572	-		CCNA_03841	0.76	-1.2
4,008,572	-		CCNA_03841	0.76	-0.8
4,008,593	-		CCNA_03841	0.78	-2.6
4,008,593	-		CCNA_03841	0.78	-1.7
4,008,620	+		CCNA_03841	0.81	-1.9
4,008,620	+		CCNA_03841	0.81	-1.1
4,008,620	+		CCNA_03841	0.81	-0.3
4,008,626	+		CCNA_03841	0.81	-3.6
4,008,626	+		CCNA_03841	0.81	-0.9
4,008,628	-		CCNA_03841	0.81	+1.5
4,008,628	-		CCNA_03841	0.81	+0.3
4,008,628	-		CCNA_03841	0.81	-1.2
4,008,628	-		CCNA_03841	0.81	+1.1
4,008,628	-		CCNA_03841	0.81	-1.6
4,008,628	-		CCNA_03841	0.81	-2.0
4,008,628	-		CCNA_03841	0.81	-0.0
4,008,649	+		CCNA_03841	0.84	+2.5
4,008,649	-		CCNA_03841	0.84	-1.2
4,008,692	-		CCNA_03841	0.88	-1.1
4,008,716	+				-1.1
4,008,719	-				-1.5
4,008,724	-				+1.4
4,008,724	-				+1.3
4,008,724	-				+1.1
4,008,745	+				-1.9
4,008,757	+				-1.5
4,008,762	+				-1.3
4,008,765	-				-0.8
4,008,776	-				+0.7
4,008,781	+				-1.3
4,008,852	-				+0.5
4,008,868	+				+0.1
4,008,868	+				-4.0
4,009,601	-				-0.9
4,009,627	-				+0.1
4,009,686	+		CCNA_03843	0.14	-1.1
4,009,735	+		CCNA_03843	0.22	-0.3
4,009,738	-		CCNA_03843	0.22	-2.9
4,009,740	+		CCNA_03843	0.23	-1.1
4,009,743	-		CCNA_03843	0.23	-1.0
4,009,770	+		CCNA_03843	0.28	-0.6
4,009,778	-		CCNA_03843	0.29	-2.1
4,009,784	-		CCNA_03843	0.30	-2.7
4,009,819	-		CCNA_03843	0.36	-1.8
4,009,829	+		CCNA_03843	0.37	-1.9
4,009,836	+		CCNA_03843	0.38	-0.6
4,009,836	+		CCNA_03843	0.38	-1.7
4,009,836	+		CCNA_03843	0.38	+0.9
4,009,836	+		CCNA_03843	0.38	-1.1
4,009,844	-		CCNA_03843	0.40	-1.3
4,009,854	-		CCNA_03843	0.41	-2.8
4,009,863	-		CCNA_03843	0.43	-2.2
4,009,878	+		CCNA_03843	0.45	-2.5
4,009,886	-		CCNA_03843	0.47	-3.0
4,009,910	-		CCNA_03843	0.51	-1.8
4,009,921	-		CCNA_03843	0.53	-1.5
4,009,956	-		CCNA_03843	0.58	-2.8
4,010,012	+		CCNA_03843	0.68	+0.1
4,010,113	+		CCNA_03843	0.84	+1.0
4,010,113	-		CCNA_03843	0.84	-0.6
4,010,128	-		CCNA_03843	0.87	-1.1
4,010,168	+				-1.2
4,010,271	+				-0.9
4,010,271	+				+0.5
4,010,306	-				-3.1
4,010,335	-				-1.8
4,010,335	-				-0.9
4,010,353	-		CCNA_03844	0.11	-2.0
4,010,361	+		CCNA_03844	0.12	-2.6
4,010,419	+		CCNA_03844	0.16	+0.5
4,010,453	+		CCNA_03844	0.19	+0.5
4,010,453	-		CCNA_03844	0.19	-1.5
4,010,512	-		CCNA_03844	0.24	-2.9
4,010,512	-		CCNA_03844	0.24	-1.3
4,010,565	+		CCNA_03844	0.28	+0.5
4,010,573	-		CCNA_03844	0.28	-0.3
4,010,580	-		CCNA_03844	0.29	-1.1
4,010,592	-		CCNA_03844	0.30	-0.6
4,010,597	+		CCNA_03844	0.30	-0.1