Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03085

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
3,233,537	-		CCNA_03084	0.31	-1.7
3,233,562	+		CCNA_03084	0.33	+1.1
3,233,582	-		CCNA_03084	0.34	-1.9
3,233,611	-		CCNA_03084	0.37	-0.8
3,233,648	-		CCNA_03084	0.40	-0.8
3,233,667	-		CCNA_03084	0.41	+0.6
3,233,673	+		CCNA_03084	0.42	-2.3
3,233,674	+		CCNA_03084	0.42	-2.8
3,233,682	-		CCNA_03084	0.43	+0.9
3,233,682	-		CCNA_03084	0.43	-0.7
3,233,696	+		CCNA_03084	0.44	-0.8
3,233,696	+		CCNA_03084	0.44	-0.5
3,233,745	-		CCNA_03084	0.48	-0.4
3,233,777	+		CCNA_03084	0.50	-3.4
3,233,808	-		CCNA_03084	0.53	-0.6
3,233,830	+		CCNA_03084	0.54	+0.3
3,233,838	-		CCNA_03084	0.55	-0.9
3,233,843	-		CCNA_03084	0.56	+0.2
3,233,845	+		CCNA_03084	0.56	-2.5
3,233,848	-		CCNA_03084	0.56	-0.3
3,233,855	+		CCNA_03084	0.56	-0.1
3,233,857	+		CCNA_03084	0.57	+1.5
3,233,858	-		CCNA_03084	0.57	-0.2
3,233,912	-		CCNA_03084	0.61	-0.5
3,233,926	-		CCNA_03084	0.62	-1.0
3,233,926	-		CCNA_03084	0.62	-1.1
3,233,926	-		CCNA_03084	0.62	-0.1
3,233,942	+		CCNA_03084	0.64	-0.7
3,233,954	-		CCNA_03084	0.64	+0.3
3,234,006	-		CCNA_03084	0.69	-0.8
3,234,021	-		CCNA_03084	0.70	+1.5
3,234,067	-		CCNA_03084	0.74	-0.6
3,234,073	+		CCNA_03084	0.74	-0.5
3,234,119	+		CCNA_03084	0.78	+0.7
3,234,157	+		CCNA_03084	0.81	+0.9
3,234,165	-		CCNA_03084	0.82	+1.6
3,234,186	+		CCNA_03084	0.83	+0.6
3,234,205	-		CCNA_03084	0.85	-0.4
3,234,262	-		CCNA_03084	0.89	-3.3
3,234,267	-		CCNA_03084	0.90	+0.5
3,234,272	-				+0.2
3,234,283	-				-1.2
3,234,302	+				-0.0
3,234,302	+				+0.6
3,234,305	-				+0.2
3,234,310	-				-0.7
3,234,310	-				+0.4
3,234,330	+				-1.0
3,234,331	+				-0.7
3,234,376	+				+0.1
3,234,391	-				-1.7
3,234,393	+				-1.3
3,234,393	+				+4.8
3,234,393	+				+0.1
3,234,401	-				+0.5
3,234,401	-				+0.0
3,234,401	-				+1.9
3,234,460	-				-0.6
3,234,469	+				-1.2
3,234,477	-				+1.2
3,234,477	-				+1.4
3,234,495	+				+0.4
3,234,500	+				-1.2
3,234,508	+				-1.2
3,234,540	+				-0.4
3,234,547	+				-1.2
3,234,569	-				-0.4
3,234,635	+		CCNA_03085	0.10	+0.4
3,234,644	-		CCNA_03085	0.11	-0.4
3,234,644	-		CCNA_03085	0.11	-0.0
3,234,644	-		CCNA_03085	0.11	+2.2
3,234,644	-		CCNA_03085	0.11	+0.7
3,234,673	+		CCNA_03085	0.14	-0.5
3,234,687	-		CCNA_03085	0.15	+0.2
3,234,700	-		CCNA_03085	0.17	-0.3
3,234,768	-		CCNA_03085	0.24	-0.3
3,234,778	-		CCNA_03085	0.25	-0.3
3,234,805	+		CCNA_03085	0.27	+0.9
3,234,805	+		CCNA_03085	0.27	-0.1
3,234,805	+		CCNA_03085	0.27	-1.4
3,234,807	+		CCNA_03085	0.28	+1.9
3,234,807	+		CCNA_03085	0.28	-1.2
3,234,807	+		CCNA_03085	0.28	-0.5
3,234,813	-		CCNA_03085	0.28	-2.7
3,234,813	-		CCNA_03085	0.28	+0.7
3,234,813	-		CCNA_03085	0.28	+0.2
3,234,813	-		CCNA_03085	0.28	+2.9
3,234,815	-		CCNA_03085	0.28	-0.8
3,234,815	-		CCNA_03085	0.28	-1.3
3,234,835	+		CCNA_03085	0.30	-0.9
3,234,867	+		CCNA_03085	0.34	-1.3
3,234,891	+		CCNA_03085	0.36	-2.0
3,234,901	+		CCNA_03085	0.37	-2.1
3,234,920	-		CCNA_03085	0.39	-1.2
3,234,939	-		CCNA_03085	0.41	-0.1
3,234,941	+		CCNA_03085	0.41	-2.8
3,234,992	+		CCNA_03085	0.47	+0.6
3,235,008	-		CCNA_03085	0.48	-1.0
3,235,031	+		CCNA_03085	0.51	-2.1
3,235,031	+		CCNA_03085	0.51	-1.3
3,235,039	-		CCNA_03085	0.51	+0.8
3,235,039	-		CCNA_03085	0.51	-1.5
3,235,039	-		CCNA_03085	0.51	-1.2
3,235,138	+		CCNA_03085	0.61	+1.1
3,235,146	-		CCNA_03085	0.62	+0.7
3,235,154	-		CCNA_03085	0.63	-0.0
3,235,157	+		CCNA_03085	0.63	+0.2
3,235,157	+		CCNA_03085	0.63	-0.7
3,235,165	+		CCNA_03085	0.64	+0.9
3,235,165	-		CCNA_03085	0.64	+0.9
3,235,165	-		CCNA_03085	0.64	-0.4
3,235,171	+		CCNA_03085	0.65	-2.0
3,235,171	+		CCNA_03085	0.65	-1.7
3,235,171	+		CCNA_03085	0.65	+5.8
3,235,171	+		CCNA_03085	0.65	-1.8
3,235,171	+		CCNA_03085	0.65	-0.2
3,235,179	-		CCNA_03085	0.66	+0.7
3,235,179	-		CCNA_03085	0.66	+1.0
3,235,179	-		CCNA_03085	0.66	+1.8
3,235,191	+		CCNA_03085	0.67	-0.6
3,235,191	+		CCNA_03085	0.67	-1.4
3,235,199	-		CCNA_03085	0.68	+0.8
3,235,199	-		CCNA_03085	0.68	-0.3
3,235,199	-		CCNA_03085	0.68	-0.4
3,235,222	+		CCNA_03085	0.70	+0.3
3,235,231	-		CCNA_03085	0.71	+0.0
3,235,236	+		CCNA_03085	0.71	+0.7
3,235,261	+		CCNA_03085	0.74	+1.4
3,235,261	+		CCNA_03085	0.74	-0.8
3,235,264	-		CCNA_03085	0.74	-0.1
3,235,269	-		CCNA_03085	0.75	+0.3
3,235,311	-		CCNA_03085	0.79	-1.7
3,235,321	-		CCNA_03085	0.80	-1.2
3,235,345	+		CCNA_03085	0.83	-4.2
3,235,345	+		CCNA_03085	0.83	-0.9
3,235,353	-		CCNA_03085	0.83	-0.4
3,235,353	-		CCNA_03085	0.83	+0.5
3,235,363	+		CCNA_03085	0.84	-2.2
3,235,371	-		CCNA_03085	0.85	-0.7
3,235,371	-		CCNA_03085	0.85	-0.5
3,235,371	-		CCNA_03085	0.85	-0.1
3,235,374	+		CCNA_03085	0.86	+0.9
3,235,374	+		CCNA_03085	0.86	-0.9
3,235,382	-		CCNA_03085	0.86	-0.2
3,235,386	+		CCNA_03085	0.87	-1.5
3,235,399	+		CCNA_03085	0.88	-1.5
3,235,417	+				+2.4
3,235,417	+				-0.8
3,235,425	-				-0.2
3,235,425	-				+0.9
3,235,477	+				-0.6
3,235,495	-				-0.9
3,235,495	-				-2.0
3,235,500	-				+0.4
3,235,596	-				-0.1
3,235,637	+		CCNA_03086	0.13	-0.4
3,235,649	+		CCNA_03086	0.16	+1.6
3,235,649	+		CCNA_03086	0.16	+2.9
3,235,654	+		CCNA_03086	0.17	-0.9
3,235,656	-		CCNA_03086	0.17	-1.2
3,235,657	-		CCNA_03086	0.18	-0.3
3,235,669	+		CCNA_03086	0.20	+0.8
3,235,669	+		CCNA_03086	0.20	-2.7
3,235,669	+		CCNA_03086	0.20	-1.3
3,235,677	-		CCNA_03086	0.22	-0.0
3,235,683	+		CCNA_03086	0.23	+0.3
3,235,691	-		CCNA_03086	0.25	+1.9
3,235,706	+		CCNA_03086	0.29	-1.8
3,235,726	+		CCNA_03086	0.33	-0.1
3,235,819	+		CCNA_03086	0.54	-1.2
3,235,865	+		CCNA_03086	0.64	-0.4
3,235,865	+		CCNA_03086	0.64	-2.5
3,235,865	+		CCNA_03086	0.64	-1.7
3,235,865	+		CCNA_03086	0.64	+2.1
3,235,876	+		CCNA_03086	0.67	-0.7
3,235,876	+		CCNA_03086	0.67	-1.1
3,235,921	+		CCNA_03086	0.77	-2.4
3,235,978	-		CCNA_03086	0.89	-1.1
3,236,055	-				+1.1
3,236,092	+				+0.9
3,236,100	-				-0.1
3,236,100	-				-1.8
3,236,121	-				-0.7
3,236,190	+				-2.6
3,236,320	+				-0.6
3,236,322	+				+0.3
3,236,341	+				-1.8
3,236,352	+				+0.5
3,236,360	+				-0.4
3,236,361	+				-1.8
3,236,362	+				-0.8
3,236,398	-				-0.7
3,236,407	-				-0.7
3,236,491	+		CCNA_03087	0.24	+0.9
3,236,499	-		CCNA_03087	0.26	-2.0
3,236,509	-				-0.4
3,236,509	-		CCNA_03087	0.27	-1.5