Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02048

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,194,303	+				+3.2
2,194,318	-				+0.6
2,194,318	-				-1.1
2,194,329	+				+3.1
2,194,351	+				-1.0
2,194,361	+				+1.0
2,194,454	-				+0.3
2,194,526	-				-0.6
2,194,528	+				+3.0
2,194,532	-				-1.0
2,194,557	+				-0.4
2,194,562	+				-0.2
2,194,564	-				-2.1
2,194,564	-				+1.5
2,194,564	-				+0.2
2,194,567	+				+0.5
2,194,570	-				-1.8
2,194,570	-				-0.3
2,194,599	+				-2.1
2,194,607	-				+1.3
2,194,607	-				+2.4
2,194,607	-				+0.1
2,194,607	-				+2.0
2,194,633	+				-0.8
2,194,664	+				+0.8
2,194,669	+				+1.9
2,194,672	-				+0.7
2,194,672	-				-0.3
2,194,672	-				+0.2
2,194,701	-				-1.8
2,194,714	-				-0.3
2,194,724	+				+1.0
2,194,730	-				-0.5
2,194,730	-				+0.3
2,194,732	-				-1.0
2,194,803	+				+0.9
2,194,825	+		CCNA_02048	0.10	+3.0
2,194,850	+		CCNA_02048	0.11	-0.3
2,194,916	+		CCNA_02048	0.14	+3.6
2,194,940	-		CCNA_02048	0.15	-0.1
2,194,985	-		CCNA_02048	0.18	-2.6
2,194,990	-		CCNA_02048	0.18	-1.4
2,194,992	+		CCNA_02048	0.18	-0.7
2,194,992	+		CCNA_02048	0.18	+0.8
2,194,992	+		CCNA_02048	0.18	+0.7
2,194,992	+		CCNA_02048	0.18	+0.8
2,195,012	+		CCNA_02048	0.19	+1.0
2,195,016	+		CCNA_02048	0.19	+0.1
2,195,036	+		CCNA_02048	0.20	-0.1
2,195,042	-		CCNA_02048	0.20	-2.2
2,195,046	+		CCNA_02048	0.20	+1.0
2,195,058	+		CCNA_02048	0.21	+0.7
2,195,083	+		CCNA_02048	0.22	+1.2
2,195,083	+		CCNA_02048	0.22	+0.4
2,195,093	+		CCNA_02048	0.23	+0.7
2,195,153	+		CCNA_02048	0.25	+0.2
2,195,209	-		CCNA_02048	0.28	-1.1
2,195,221	+		CCNA_02048	0.28	+2.1
2,195,229	-		CCNA_02048	0.29	-2.0
2,195,237	+		CCNA_02048	0.29	-0.1
2,195,261	+		CCNA_02048	0.30	+0.7
2,195,293	+		CCNA_02048	0.32	-1.3
2,195,293	+		CCNA_02048	0.32	+0.4
2,195,301	-		CCNA_02048	0.32	-2.1
2,195,321	-		CCNA_02048	0.33	-1.8
2,195,357	+		CCNA_02048	0.35	+2.5
2,195,357	+		CCNA_02048	0.35	+0.7
2,195,357	+		CCNA_02048	0.35	+0.6
2,195,357	+		CCNA_02048	0.35	+1.8
2,195,365	-		CCNA_02048	0.35	+0.0
2,195,365	-		CCNA_02048	0.35	-2.7
2,195,385	-		CCNA_02048	0.36	-0.4
2,195,391	+		CCNA_02048	0.36	+1.9
2,195,419	-		CCNA_02048	0.37	+0.5
2,195,471	-				+1.0
2,195,505	+		CCNA_02048	0.41	+1.4
2,195,506	-		CCNA_02048	0.41	-1.3
2,195,555	-		CCNA_02048	0.44	-0.8
2,195,556	+		CCNA_02048	0.44	+0.3
2,195,594	-		CCNA_02048	0.45	+0.5
2,195,639	-		CCNA_02048	0.48	+4.6
2,195,656	+		CCNA_02048	0.48	+1.4
2,195,674	+		CCNA_02048	0.49	+0.6
2,195,681	-		CCNA_02048	0.49	-2.8
2,195,689	+		CCNA_02048	0.50	+0.3
2,195,772	+		CCNA_02048	0.54	+1.2
2,195,772	+		CCNA_02048	0.54	+0.9
2,195,772	+		CCNA_02048	0.54	+2.3
2,195,777	+		CCNA_02048	0.54	+1.9
2,195,833	-		CCNA_02048	0.56	+0.3
2,195,891	+		CCNA_02048	0.59	+1.0
2,195,891	+		CCNA_02048	0.59	+2.5
2,195,891	+		CCNA_02048	0.59	+0.8
2,195,891	+		CCNA_02048	0.59	+2.0
2,195,891	+		CCNA_02048	0.59	+2.3
2,195,891	+		CCNA_02048	0.59	+1.9
2,195,896	+		CCNA_02048	0.59	+2.0
2,195,899	-		CCNA_02048	0.59	-1.3
2,195,899	-		CCNA_02048	0.59	-1.3
2,195,920	-		CCNA_02048	0.60	-1.0
2,195,924	+		CCNA_02048	0.61	+4.4
2,195,939	-		CCNA_02048	0.61	-1.9
2,195,970	+		CCNA_02048	0.63	+1.2
2,195,977	+		CCNA_02048	0.63	+0.8
2,195,993	+		CCNA_02048	0.64	+1.3
2,196,001	-		CCNA_02048	0.64	-1.1
2,196,001	-		CCNA_02048	0.64	-0.7
2,196,015	-		CCNA_02048	0.65	+0.0
2,196,021	+		CCNA_02048	0.65	+2.6
2,196,043	-		CCNA_02048	0.66	+0.5
2,196,083	+		CCNA_02048	0.68	+2.0
2,196,101	+		CCNA_02048	0.69	+2.4
2,196,123	-		CCNA_02048	0.70	-2.4
2,196,124	+		CCNA_02048	0.70	+0.6
2,196,135	+		CCNA_02048	0.70	-2.3
2,196,178	-		CCNA_02048	0.72	-1.7
2,196,183	+		CCNA_02048	0.72	+1.7
2,196,191	-		CCNA_02048	0.73	-2.0
2,196,191	-		CCNA_02048	0.73	-1.1
2,196,207	+		CCNA_02048	0.74	+1.1
2,196,239	+		CCNA_02048	0.75	+1.5
2,196,259	-		CCNA_02048	0.76	-2.2
2,196,285	+		CCNA_02048	0.77	+3.7
2,196,285	+		CCNA_02048	0.77	+0.0
2,196,405	-		CCNA_02048	0.83	-1.1
2,196,408	+		CCNA_02048	0.83	+4.2
2,196,410	+		CCNA_02048	0.83	+2.0
2,196,418	-		CCNA_02048	0.83	-1.8
2,196,420	+		CCNA_02048	0.83	+1.3
2,196,427	-		CCNA_02048	0.84	-1.7
2,196,432	+		CCNA_02048	0.84	+0.9
2,196,432	+		CCNA_02048	0.84	+1.7
2,196,432	+		CCNA_02048	0.84	+0.4
2,196,432	+		CCNA_02048	0.84	+0.7
2,196,437	+		CCNA_02048	0.84	+2.3
2,196,437	+		CCNA_02048	0.84	+2.6
2,196,437	+		CCNA_02048	0.84	+1.7
2,196,440	-		CCNA_02048	0.84	-1.1
2,196,445	-		CCNA_02048	0.85	+0.4
2,196,465	+		CCNA_02048	0.85	+1.1
2,196,467	+		CCNA_02048	0.86	+1.9
2,196,467	+		CCNA_02048	0.86	+2.3
2,196,475	-		CCNA_02048	0.86	-2.1
2,196,499	+		CCNA_02048	0.87	+2.1
2,196,504	+		CCNA_02048	0.87	+1.6
2,196,522	+		CCNA_02048	0.88	+2.7
2,196,522	-		CCNA_02048	0.88	+2.0
2,196,538	+		CCNA_02048	0.89	+2.0
2,196,546	+		CCNA_02048	0.89	+2.7
2,196,546	+		CCNA_02048	0.89	+1.9
2,196,546	+		CCNA_02048	0.89	+1.9
2,196,546	+		CCNA_02048	0.89	+2.4
2,196,546	+		CCNA_02048	0.89	+2.1
2,196,546	+		CCNA_02048	0.89	+2.3
2,196,551	+		CCNA_02048	0.89	+2.0
2,196,551	+		CCNA_02048	0.89	+1.7
2,196,551	+		CCNA_02048	0.89	+1.8
2,196,554	-		CCNA_02048	0.90	-1.8
2,196,554	-		CCNA_02048	0.90	-2.5
2,196,556	+		CCNA_02048	0.90	+2.5
2,196,556	+		CCNA_02048	0.90	+0.8
2,196,556	+		CCNA_02048	0.90	+5.8
2,196,556	+		CCNA_02048	0.90	+1.4
2,196,556	+		CCNA_02048	0.90	+2.6
2,196,556	+		CCNA_02048	0.90	+1.1
2,196,556	+		CCNA_02048	0.90	+6.4
2,196,556	+		CCNA_02048	0.90	+1.1
2,196,559	-		CCNA_02048	0.90	-0.5
2,196,561	+		CCNA_02048	0.90	+3.5
2,196,564	-		CCNA_02048	0.90	-0.8
2,196,564	-		CCNA_02048	0.90	-1.4
2,196,564	-		CCNA_02048	0.90	-2.0
2,196,564	-		CCNA_02048	0.90	+0.0
2,196,564	-		CCNA_02048	0.90	-0.3
2,196,564	-		CCNA_02048	0.90	-1.0
2,196,571	-				-1.7
2,196,586	-				-0.9
2,196,615	+				+1.9
2,196,624	-				-1.3
2,196,624	-				+0.6
2,196,626	+				+2.2
2,196,695	+				+3.0
2,196,711	-				-2.0
2,196,713	-				-2.4
2,196,776	+				+2.6
2,196,776	+				+2.0
2,196,784	-				-2.2
2,196,784	-				-1.4
2,196,804	+				+3.8
2,196,894	+				-3.1
2,196,902	-		CCNA_02049	0.11	+0.6
2,196,902	-		CCNA_02049	0.11	+1.0
2,196,910	-		CCNA_02049	0.13	-0.0
2,196,965	-		CCNA_02049	0.27	+1.3
2,196,995	+		CCNA_02049	0.34	-2.0
2,196,996	+		CCNA_02049	0.34	+0.8
2,196,996	+		CCNA_02049	0.34	+1.0
2,197,004	-		CCNA_02049	0.36	-1.8
2,197,004	-		CCNA_02049	0.36	+1.3
2,197,020	+		CCNA_02049	0.40	-3.2
2,197,021	+		CCNA_02049	0.41	-0.7
2,197,031	+		CCNA_02049	0.43	-1.1
2,197,039	-		CCNA_02049	0.45	-0.1
2,197,044	-		CCNA_02049	0.46	-0.5
2,197,055	+		CCNA_02049	0.49	-1.1
2,197,062	-		CCNA_02049	0.51	+0.2
2,197,121	-		CCNA_02049	0.66	+1.3
2,197,151	+		CCNA_02049	0.73	+0.4
2,197,151	-		CCNA_02049	0.73	+1.7
2,197,250	+				+1.3
2,197,358	-				+2.2
2,197,404	+				+0.7
2,197,412	-				-0.1
2,197,412	-				-1.5
2,197,412	-				-0.4
2,197,412	-				-1.1
2,197,462	+				-0.1
2,197,476	+				-0.2
2,197,484	-				-1.5
2,197,484	-				-1.5
2,197,537	-				-0.2
2,197,537	-				-1.2
2,197,553	+				-1.0
2,197,553	+				+0.9
2,197,556	-				-1.2
2,197,565	+				+0.0
2,197,571	+				+1.5
2,197,572	+		CCNA_02050	0.10	+1.6
2,197,572	+		CCNA_02050	0.10	+1.1
2,197,579	-		CCNA_02050	0.10	-1.3
2,197,609	+		CCNA_02050	0.13	+0.9
2,197,651	+		CCNA_02050	0.15	+1.3
2,197,656	+		CCNA_02050	0.16	+1.0
2,197,749	-		CCNA_02050	0.22	-0.3
2,197,764	-		CCNA_02050	0.23	-0.6
2,197,774	-		CCNA_02050	0.24	-0.2