Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01508

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,617,252	+		CCNA_01506	0.60	+0.2
1,617,252	+		CCNA_01506	0.60	-1.6
1,617,252	+		CCNA_01506	0.60	-1.5
1,617,252	+		CCNA_01506	0.60	-2.2
1,617,257	+		CCNA_01506	0.61	-0.1
1,617,259	+		CCNA_01506	0.61	-0.6
1,617,260	-		CCNA_01506	0.61	-0.4
1,617,260	-		CCNA_01506	0.61	+1.2
1,617,285	+		CCNA_01506	0.65	-0.8
1,617,286	-		CCNA_01506	0.65	+0.6
1,617,286	-		CCNA_01506	0.65	+1.3
1,617,298	+				+0.6
1,617,312	+		CCNA_01506	0.68	+1.9
1,617,319	+		CCNA_01506	0.69	-1.8
1,617,321	-		CCNA_01506	0.70	+1.2
1,617,327	-		CCNA_01506	0.70	-0.6
1,617,327	-		CCNA_01506	0.70	+2.0
1,617,327	-		CCNA_01506	0.70	+2.2
1,617,332	-		CCNA_01506	0.71	+0.7
1,617,332	-		CCNA_01506	0.71	+1.1
1,617,332	-		CCNA_01506	0.71	+1.5
1,617,416	-		CCNA_01506	0.82	+3.8
1,617,418	-		CCNA_01506	0.83	+1.1
1,617,422	+		CCNA_01506	0.83	-1.9
1,617,422	+		CCNA_01506	0.83	+0.2
1,617,425	-		CCNA_01506	0.84	+0.8
1,617,425	-		CCNA_01506	0.84	-0.6
1,617,476	+				-1.2
1,617,484	-				+1.6
1,617,491	+				+0.8
1,617,494	-				+0.6
1,617,578	+				-1.6
1,617,586	-				+1.0
1,617,586	-				+0.7
1,617,586	-				+1.2
1,617,590	+				-2.0
1,617,615	-		CCNA_01507	0.11	-0.8
1,617,674	-		CCNA_01507	0.20	+1.7
1,617,674	-		CCNA_01507	0.20	+0.1
1,617,674	-		CCNA_01507	0.20	+1.8
1,617,676	-		CCNA_01507	0.20	-0.4
1,617,723	-		CCNA_01507	0.27	+0.7
1,617,723	-		CCNA_01507	0.27	-0.4
1,617,726	+		CCNA_01507	0.28	-0.8
1,617,733	-		CCNA_01507	0.29	-0.5
1,617,734	-		CCNA_01507	0.29	-0.1
1,617,734	-		CCNA_01507	0.29	+0.5
1,617,736	+		CCNA_01507	0.29	+3.5
1,617,755	-		CCNA_01507	0.32	+1.1
1,617,780	+		CCNA_01507	0.36	-1.5
1,617,788	-		CCNA_01507	0.37	-2.2
1,617,788	-		CCNA_01507	0.37	+3.0
1,617,788	-		CCNA_01507	0.37	+2.0
1,617,788	-		CCNA_01507	0.37	+2.2
1,617,793	-		CCNA_01507	0.38	+0.8
1,617,793	-		CCNA_01507	0.38	+0.2
1,617,807	+		CCNA_01507	0.40	-0.1
1,617,808	-		CCNA_01507	0.40	+0.8
1,617,815	-		CCNA_01507	0.41	-0.3
1,617,827	-		CCNA_01507	0.43	+3.2
1,617,845	+		CCNA_01507	0.46	-1.8
1,617,853	-		CCNA_01507	0.47	-1.1
1,617,853	-		CCNA_01507	0.47	+0.5
1,617,853	-		CCNA_01507	0.47	+0.9
1,617,862	-		CCNA_01507	0.48	+1.7
1,617,891	-		CCNA_01507	0.53	+2.9
1,617,921	-		CCNA_01507	0.57	+0.2
1,617,978	-		CCNA_01507	0.66	+1.6
1,617,978	-		CCNA_01507	0.66	+0.1
1,618,027	-		CCNA_01507	0.73	+1.5
1,618,081	-		CCNA_01507	0.82	+0.5
1,618,096	+		CCNA_01507	0.84	+0.1
1,618,127	+		CCNA_01507	0.89	+0.2
1,618,136	+				-0.8
1,618,144	-				+1.0
1,618,144	-				-1.9
1,618,157	-				+0.6
1,618,165	+				-1.9
1,618,165	+				+0.8
1,618,191	-				+2.0
1,618,217	+				+0.1
1,618,217	+				+0.4
1,618,225	-				+1.7
1,618,299	+		CCNA_01508	0.12	-1.2
1,618,305	-		CCNA_01508	0.13	+0.2
1,618,316	+		CCNA_01508	0.14	-2.4
1,618,328	+		CCNA_01508	0.16	+0.5
1,618,328	+		CCNA_01508	0.16	-0.6
1,618,328	+		CCNA_01508	0.16	+0.2
1,618,335	+		CCNA_01508	0.16	+0.6
1,618,336	-		CCNA_01508	0.17	+0.9
1,618,336	-		CCNA_01508	0.17	+1.4
1,618,336	-		CCNA_01508	0.17	+3.4
1,618,336	-		CCNA_01508	0.17	+1.2
1,618,345	+		CCNA_01508	0.18	+2.0
1,618,363	-		CCNA_01508	0.20	-0.6
1,618,368	-		CCNA_01508	0.21	+1.1
1,618,413	+		CCNA_01508	0.26	+0.6
1,618,421	-		CCNA_01508	0.27	+1.2
1,618,421	-		CCNA_01508	0.27	+1.0
1,618,421	-		CCNA_01508	0.27	+1.4
1,618,469	+		CCNA_01508	0.33	-0.8
1,618,469	+		CCNA_01508	0.33	-0.1
1,618,484	-		CCNA_01508	0.35	+0.4
1,618,485	-		CCNA_01508	0.35	+0.6
1,618,485	-		CCNA_01508	0.35	+0.2
1,618,492	-		CCNA_01508	0.36	+1.2
1,618,509	+		CCNA_01508	0.39	-0.2
1,618,517	+		CCNA_01508	0.40	-0.8
1,618,570	+		CCNA_01508	0.46	-0.2
1,618,593	-		CCNA_01508	0.49	+0.7
1,618,600	+		CCNA_01508	0.50	-1.5
1,618,624	+		CCNA_01508	0.53	-2.9
1,618,624	+		CCNA_01508	0.53	+0.4
1,618,624	+		CCNA_01508	0.53	-0.1
1,618,632	-		CCNA_01508	0.54	+0.6
1,618,658	+		CCNA_01508	0.58	+1.1
1,618,691	+		CCNA_01508	0.62	-1.2
1,618,699	-		CCNA_01508	0.63	+1.5
1,618,706	+		CCNA_01508	0.64	-0.1
1,618,749	-		CCNA_01508	0.69	+1.7
1,618,754	-		CCNA_01508	0.70	+1.6
1,618,782	-		CCNA_01508	0.73	+2.0
1,618,819	+				+4.2
1,618,822	-		CCNA_01508	0.78	+2.6
1,618,844	+		CCNA_01508	0.81	-0.6
1,618,852	-		CCNA_01508	0.82	+1.6
1,618,859	-		CCNA_01508	0.83	+4.9
1,618,861	-		CCNA_01508	0.83	+0.6
1,618,951	-				+1.5
1,618,951	-				+5.4
1,618,951	-				+2.3
1,618,951	-				+0.4
1,618,951	-				+1.7
1,618,959	+				-0.1
1,618,996	-				+1.9
1,619,025	+				-0.8
1,619,031	-				+0.3
1,619,047	+				-1.5
1,619,047	+				+5.7
1,619,078	+				-0.1
1,619,079	-				+0.3
1,619,091	+				-0.3
1,619,116	+				-0.9
1,619,119	-				+3.6
1,619,119	-				+0.8
1,619,119	-				+2.6
1,619,119	-				+1.5
1,619,171	-				+0.8
1,619,274	-		CCNA_01509	0.16	+2.2
1,619,274	-		CCNA_01509	0.16	+0.3
1,619,279	+		CCNA_01509	0.16	+1.6
1,619,287	+		CCNA_01509	0.17	-1.9
1,619,287	-		CCNA_01509	0.17	+0.8
1,619,287	-		CCNA_01509	0.17	+1.6
1,619,287	-		CCNA_01509	0.17	+1.7
1,619,287	-		CCNA_01509	0.17	+1.0
1,619,295	-		CCNA_01509	0.18	+0.5
1,619,351	+		CCNA_01509	0.23	-0.3
1,619,370	+		CCNA_01509	0.24	-0.9
1,619,376	-		CCNA_01509	0.25	+1.0
1,619,433	-		CCNA_01509	0.30	-0.1
1,619,433	-		CCNA_01509	0.30	-0.3
1,619,469	-		CCNA_01509	0.33	+1.2
1,619,539	-		CCNA_01509	0.39	+0.3
1,619,539	-		CCNA_01509	0.39	+1.6
1,619,588	+		CCNA_01509	0.44	-0.8
1,619,652	+		CCNA_01509	0.50	-1.1
1,619,653	-		CCNA_01509	0.50	-0.7
1,619,660	+		CCNA_01509	0.50	+1.2
1,619,668	-		CCNA_01509	0.51	-0.2
1,619,685	+		CCNA_01509	0.53	-2.2
1,619,729	-		CCNA_01509	0.56	+0.1
1,619,745	-		CCNA_01509	0.58	-0.4
1,619,784	+		CCNA_01509	0.61	-2.0
1,619,808	-		CCNA_01509	0.64	-0.0
1,619,842	-		CCNA_01509	0.67	-1.6
1,619,842	-		CCNA_01509	0.67	+1.7
1,619,978	-		CCNA_01509	0.79	+0.2