Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01199

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,321,574	-				+0.5
1,321,579	+				-1.5
1,321,579	+				-0.9
1,321,580	-				+2.2
1,321,587	-				-0.5
1,321,587	-				-0.2
1,321,622	+				+0.4
1,321,657	+				+1.8
1,321,661	-				-0.3
1,321,691	-				+0.2
1,321,712	+				+1.7
1,321,777	-		CCNA_01198	0.12	-1.0
1,321,780	+		CCNA_01198	0.12	+1.6
1,321,801	+		CCNA_01198	0.15	-0.7
1,321,824	-				+1.2
1,321,831	-		CCNA_01198	0.18	-3.0
1,321,866	+		CCNA_01198	0.22	-1.5
1,321,874	-		CCNA_01198	0.23	-1.6
1,321,877	+		CCNA_01198	0.23	-1.2
1,321,929	-		CCNA_01198	0.29	+0.0
1,321,942	-		CCNA_01198	0.30	-0.4
1,321,942	-		CCNA_01198	0.30	-1.4
1,321,949	+		CCNA_01198	0.31	-1.5
1,321,957	-		CCNA_01198	0.32	+0.4
1,322,005	+		CCNA_01198	0.37	-0.1
1,322,011	+		CCNA_01198	0.38	+3.2
1,322,013	-		CCNA_01198	0.38	-0.8
1,322,022	-		CCNA_01198	0.39	-0.8
1,322,025	-		CCNA_01198	0.40	-1.2
1,322,059	+		CCNA_01198	0.43	-0.4
1,322,059	-		CCNA_01198	0.43	-0.2
1,322,115	-		CCNA_01198	0.50	-1.6
1,322,186	+		CCNA_01198	0.57	-1.1
1,322,214	+		CCNA_01198	0.60	-0.5
1,322,274	+		CCNA_01198	0.67	+0.9
1,322,333	+				+0.6
1,322,381	+		CCNA_01198	0.79	-0.8
1,322,402	+		CCNA_01198	0.81	-1.5
1,322,411	-		CCNA_01198	0.82	-0.9
1,322,411	-		CCNA_01198	0.82	-0.6
1,322,412	+		CCNA_01198	0.82	+0.6
1,322,455	+		CCNA_01198	0.87	-1.3
1,322,486	+				-1.1
1,322,486	+				-0.5
1,322,496	+				-1.4
1,322,507	+				+0.2
1,322,507	+				-1.5
1,322,507	+				+0.1
1,322,507	+				-0.3
1,322,507	+				-0.2
1,322,507	+				-0.1
1,322,507	+				-2.5
1,322,507	+				-0.9
1,322,507	+				+3.5
1,322,509	+				+1.6
1,322,515	-				-1.8
1,322,515	-				-0.4
1,322,515	-				-1.0
1,322,520	-				+0.8
1,322,582	-				+2.2
1,322,621	-				+0.6
1,322,628	+				-0.6
1,322,628	+				-2.0
1,322,631	+				+0.2
1,322,646	-				-0.4
1,322,646	-				-0.4
1,322,719	+		CCNA_01199	0.17	-0.4
1,322,721	+		CCNA_01199	0.18	-0.8
1,322,789	+		CCNA_01199	0.26	+0.8
1,322,801	+		CCNA_01199	0.27	-2.4
1,322,806	+		CCNA_01199	0.27	-0.6
1,322,814	-		CCNA_01199	0.28	+1.6
1,322,814	-				+2.2
1,322,825	+		CCNA_01199	0.30	-2.7
1,322,825	+		CCNA_01199	0.30	-0.4
1,322,825	+		CCNA_01199	0.30	-0.8
1,322,830	+		CCNA_01199	0.30	-1.5
1,322,830	+		CCNA_01199	0.30	+0.4
1,322,830	+		CCNA_01199	0.30	-0.6
1,322,838	-		CCNA_01199	0.31	-2.6
1,322,944	+		CCNA_01199	0.43	-1.4
1,322,944	+		CCNA_01199	0.43	-0.1
1,322,944	+		CCNA_01199	0.43	-1.8
1,322,944	+		CCNA_01199	0.43	+0.0
1,322,944	+		CCNA_01199	0.43	-0.7
1,322,952	-		CCNA_01199	0.44	-2.2
1,322,952	-		CCNA_01199	0.44	-0.8
1,322,952	-		CCNA_01199	0.44	-1.3
1,322,960	+		CCNA_01199	0.45	-1.1
1,322,960	+		CCNA_01199	0.45	-1.2
1,322,968	-		CCNA_01199	0.46	-1.2
1,322,982	+		CCNA_01199	0.48	-1.4
1,322,990	-		CCNA_01199	0.49	+1.8
1,322,990	-		CCNA_01199	0.49	-0.8
1,322,992	+		CCNA_01199	0.49	+0.4
1,322,997	+		CCNA_01199	0.49	-1.4
1,323,002	+		CCNA_01199	0.50	-0.7
1,323,005	-		CCNA_01199	0.50	-0.4
1,323,024	+		CCNA_01199	0.53	-1.5
1,323,032	-		CCNA_01199	0.53	-1.7
1,323,069	-		CCNA_01199	0.58	-1.0
1,323,177	+		CCNA_01199	0.70	+2.3
1,323,185	-		CCNA_01199	0.71	-0.6
1,323,212	+		CCNA_01199	0.74	+0.2
1,323,245	+		CCNA_01199	0.78	-1.1
1,323,385	+				+0.8
1,323,393	-				-1.2
1,323,443	-				-2.6
1,323,445	-				-1.3
1,323,515	-				+2.4
1,323,575	+				-0.1
1,323,607	+				-0.1
1,323,609	-				+0.4
1,323,626	+				-3.2
1,323,665	+				+0.3
1,323,666	+				+0.6
1,323,668	+				-1.2
1,323,673	-				-1.5
1,323,685	-				+1.8
1,323,685	-				+0.3
1,323,726	+		CCNA_01200	0.11	+0.6
1,323,756	+		CCNA_01200	0.12	+0.5
1,323,764	-		CCNA_01200	0.13	-1.7
1,323,776	+		CCNA_01200	0.13	-1.0
1,323,803	-		CCNA_01200	0.14	-2.1
1,323,812	+		CCNA_01200	0.15	-0.2
1,323,812	+		CCNA_01200	0.15	+0.1
1,323,812	+		CCNA_01200	0.15	-0.4
1,323,812	+		CCNA_01200	0.15	-0.6
1,323,820	-		CCNA_01200	0.15	+1.8
1,323,820	-		CCNA_01200	0.15	+0.8
1,323,841	-		CCNA_01200	0.16	+1.0
1,323,848	+		CCNA_01200	0.16	-1.1
1,323,848	+		CCNA_01200	0.16	+0.6
1,323,848	+		CCNA_01200	0.16	-1.6
1,323,856	-		CCNA_01200	0.17	+1.5
1,323,857	+		CCNA_01200	0.17	+1.2
1,323,865	-		CCNA_01200	0.17	-0.5
1,323,866	-		CCNA_01200	0.17	-2.0
1,323,892	-		CCNA_01200	0.18	+0.9
1,323,916	-		CCNA_01200	0.19	-0.4
1,323,933	+		CCNA_01200	0.20	-1.1
1,323,933	+		CCNA_01200	0.20	-1.6
1,323,933	+		CCNA_01200	0.20	-1.3
1,323,933	+		CCNA_01200	0.20	-0.0
1,323,973	+		CCNA_01200	0.22	-0.7
1,323,973	+		CCNA_01200	0.22	+0.2
1,323,981	-		CCNA_01200	0.22	-1.4
1,324,024	-		CCNA_01200	0.24	-2.4
1,324,077	+		CCNA_01200	0.27	-0.9
1,324,077	+		CCNA_01200	0.27	+0.1
1,324,085	-		CCNA_01200	0.27	-2.4
1,324,085	-		CCNA_01200	0.27	-1.8
1,324,096	+		CCNA_01200	0.27	+1.2
1,324,103	+		CCNA_01200	0.28	+0.6
1,324,132	+		CCNA_01200	0.29	+2.4
1,324,177	+		CCNA_01200	0.31	+0.5
1,324,180	-		CCNA_01200	0.31	+0.6
1,324,180	-		CCNA_01200	0.31	-0.2
1,324,184	+		CCNA_01200	0.31	-2.1
1,324,185	-		CCNA_01200	0.31	-1.5
1,324,185	-		CCNA_01200	0.31	-1.2
1,324,192	-		CCNA_01200	0.32	+0.7
1,324,214	+		CCNA_01200	0.33	-0.8
1,324,250	+		CCNA_01200	0.34	-0.8
1,324,284	+		CCNA_01200	0.36	-0.4
1,324,284	+		CCNA_01200	0.36	-2.9
1,324,285	-		CCNA_01200	0.36	-1.4
1,324,286	-		CCNA_01200	0.36	-0.2
1,324,292	-		CCNA_01200	0.36	+1.2
1,324,292	-		CCNA_01200	0.36	-2.6
1,324,350	-		CCNA_01200	0.39	-0.4
1,324,365	-		CCNA_01200	0.39	+0.8
1,324,378	+		CCNA_01200	0.40	+0.4
1,324,390	+		CCNA_01200	0.40	+0.7
1,324,390	+		CCNA_01200	0.40	-0.2
1,324,398	-		CCNA_01200	0.41	-1.1
1,324,424	+		CCNA_01200	0.42	+3.5
1,324,424	+		CCNA_01200	0.42	+1.3
1,324,432	-		CCNA_01200	0.42	-0.3