Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22565

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
5,527,767	-				+0.1
5,527,785	+				+0.5
5,527,785	+				-0.0
5,527,795	-				+0.8
5,528,434	+				+0.4
5,528,455	+				+0.2
5,528,463	-				+0.3
5,528,569	-		CA265_RS22565	0.15	+0.6
5,528,603	+		CA265_RS22565	0.21	-1.6
5,528,611	+		CA265_RS22565	0.23	+0.4
5,528,617	+		CA265_RS22565	0.24	-0.1
5,528,618	-		CA265_RS22565	0.24	+0.6
5,528,675	-		CA265_RS22565	0.35	+0.1
5,528,685	-		CA265_RS22565	0.36	+0.1
5,528,685	-		CA265_RS22565	0.36	+0.1
5,528,686	+		CA265_RS22565	0.37	-0.2
5,528,686	+		CA265_RS22565	0.37	+0.3
5,528,686	+		CA265_RS22565	0.37	+0.7
5,528,686	+		CA265_RS22565	0.37	+0.7
5,528,687	-		CA265_RS22565	0.37	-2.3
5,528,707	-		CA265_RS22565	0.41	-0.0
5,528,724	+		CA265_RS22565	0.44	+1.0
5,528,729	+		CA265_RS22565	0.45	-1.0
5,528,751	+		CA265_RS22565	0.49	-1.4
5,528,767	+		CA265_RS22565	0.52	+0.4
5,528,767	+		CA265_RS22565	0.52	+1.2
5,528,776	+		CA265_RS22565	0.53	+1.0
5,528,815	+		CA265_RS22565	0.61	-0.8
5,528,837	-		CA265_RS22565	0.65	+0.8
5,528,945	+		CA265_RS22565	0.85	+0.5
5,528,946	-		CA265_RS22565	0.85	+1.6
5,528,965	+		CA265_RS22565	0.89	+0.4
5,528,965	+		CA265_RS22565	0.89	-0.1
5,528,965	+		CA265_RS22565	0.89	+1.0
5,528,966	-		CA265_RS22565	0.89	+1.0
5,528,969	+		CA265_RS22565	0.89	+0.6
5,528,977	+				-0.7
5,528,978	-				-1.1
5,529,017	-				+0.3
5,529,085	+				-0.1
5,529,086	-				-0.2
5,529,106	+				+2.0
5,529,156	-				+0.1
5,529,220	+				-0.1
5,529,220	+				+0.2
5,529,331	+				-1.2
5,529,332	-				+1.6
5,529,332	-				-0.4
5,529,476	-				+0.1
5,529,482	+				+0.8
5,529,482	+				-1.0
5,529,507	+				-0.3
5,529,508	-				-1.1
5,529,518	+				-1.1
5,529,518	+				+0.1
5,529,518	+				+0.6
5,529,519	-				-0.7
5,529,619	+				-2.1
5,529,644	+				-0.4
5,529,687	+				+0.3
5,529,688	-				+0.2
5,529,707	+				+1.1
5,529,731	-				+1.0
5,529,774	+				-0.0
5,529,774	+				+0.2
5,529,774	+				+0.9
5,529,775	-				+0.6
5,529,819	-				+0.7
5,529,843	-				-0.1
5,529,885	-				+0.0
5,529,888	+				-0.3
5,529,896	+				-0.0
5,529,903	+				+0.7
5,529,904	-				-1.5
5,529,906	-				+0.7
5,529,913	-				+0.8
5,529,943	-				+0.1
5,529,943	-				-1.2
5,529,978	-				-1.0