Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21050

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
5,183,989	-				-0.3
5,184,055	+				-0.7
5,184,057	+				+0.6
5,184,057	+				-0.4
5,184,058	-				-1.7
5,184,058	-				+0.0
5,184,058	-				+1.4
5,184,101	-				-0.3
5,184,112	+				+1.1
5,184,112	+				+0.3
5,184,113	-				-0.1
5,184,118	-				-1.2
5,184,198	-				-0.6
5,185,129	+		CA265_RS21050	0.15	+0.4
5,185,130	-		CA265_RS21050	0.15	-0.4
5,185,233	-		CA265_RS21050	0.25	-0.6
5,185,233	-		CA265_RS21050	0.25	+0.4
5,185,281	+		CA265_RS21050	0.29	-0.6
5,185,281	+		CA265_RS21050	0.29	-0.2
5,185,311	-		CA265_RS21050	0.32	+1.4
5,185,315	+		CA265_RS21050	0.32	+0.1
5,185,377	-		CA265_RS21050	0.38	-1.2
5,185,381	+		CA265_RS21050	0.38	+0.1
5,185,396	+		CA265_RS21050	0.40	-0.8
5,185,574	-		CA265_RS21050	0.56	-0.6
5,185,574	-		CA265_RS21050	0.56	-1.3
5,185,646	-		CA265_RS21050	0.62	-2.3
5,185,650	-		CA265_RS21050	0.63	-0.2
5,185,782	-		CA265_RS21050	0.75	-1.8
5,185,785	-		CA265_RS21050	0.75	-0.3
5,185,819	+		CA265_RS21050	0.78	-0.0
5,185,871	+		CA265_RS21050	0.83	-0.9
5,185,872	-		CA265_RS21050	0.83	-1.7
5,185,908	+		CA265_RS21050	0.86	+1.0
5,185,909	-		CA265_RS21050	0.86	+0.4
5,186,009	+				-0.4
5,186,009	+				-0.1
5,186,010	-				+1.1
5,186,041	-				-0.1
5,186,041	-				-0.8
5,186,050	-				+0.3
5,186,092	+				-0.1
5,186,098	+				+0.3
5,186,117	-				-1.0
5,186,117	-				+0.2
5,186,137	+				+0.5
5,186,155	-				+1.3
5,186,201	+				-0.2
5,186,290	+		CA265_RS21055	0.10	+0.7
5,186,290	+		CA265_RS21055	0.10	+0.4
5,186,291	-		CA265_RS21055	0.10	-0.8
5,186,292	+		CA265_RS21055	0.11	+0.9
5,186,445	-		CA265_RS21055	0.22	-0.9
5,186,463	-		CA265_RS21055	0.23	+0.5
5,186,463	-		CA265_RS21055	0.23	+1.3
5,186,504	+		CA265_RS21055	0.27	-0.1
5,186,505	-		CA265_RS21055	0.27	-0.4
5,186,508	-		CA265_RS21055	0.27	-0.4
5,186,564	+		CA265_RS21055	0.31	-0.6
5,186,564	+		CA265_RS21055	0.31	+0.6
5,186,565	-		CA265_RS21055	0.31	-0.9
5,186,569	-		CA265_RS21055	0.32	+3.4
5,186,632	+		CA265_RS21055	0.36	-1.7
5,186,633	-		CA265_RS21055	0.36	-0.6
5,186,765	+		CA265_RS21055	0.46	+1.0
5,186,863	+		CA265_RS21055	0.54	+0.2
5,186,880	+		CA265_RS21055	0.55	-0.2
5,186,918	+		CA265_RS21055	0.58	+0.8
5,186,919	-		CA265_RS21055	0.58	-0.6
5,186,944	+		CA265_RS21055	0.60	+0.7
5,186,960	-		CA265_RS21055	0.61	-0.4
5,186,969	-		CA265_RS21055	0.62	-0.1
5,187,013	+		CA265_RS21055	0.65	+1.1
5,187,014	-		CA265_RS21055	0.65	+0.3
5,187,015	+		CA265_RS21055	0.65	-0.4
5,187,015	+		CA265_RS21055	0.65	-0.3
5,187,020	-		CA265_RS21055	0.66	+0.3