Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15990

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
4,012,509	+		CA265_RS15985	0.42	+0.6
4,012,597	-		CA265_RS15985	0.49	-0.8
4,012,696	-		CA265_RS15985	0.57	-1.2
4,012,721	+		CA265_RS15985	0.59	-0.9
4,012,722	-		CA265_RS15985	0.59	+0.2
4,012,724	-		CA265_RS15985	0.59	-0.2
4,012,775	+		CA265_RS15985	0.63	-0.6
4,012,776	-		CA265_RS15985	0.63	-0.4
4,012,776	-		CA265_RS15985	0.63	+0.7
4,012,776	-		CA265_RS15985	0.63	+0.7
4,012,776	-		CA265_RS15985	0.63	-0.0
4,012,776	-		CA265_RS15985	0.63	-0.0
4,012,826	+		CA265_RS15985	0.67	-0.1
4,012,918	+		CA265_RS15985	0.74	-0.6
4,012,918	+		CA265_RS15985	0.74	-0.3
4,012,919	-		CA265_RS15985	0.74	+2.3
4,012,921	+		CA265_RS15985	0.75	-0.9
4,012,921	+		CA265_RS15985	0.75	+0.3
4,012,975	-		CA265_RS15985	0.79	-0.0
4,012,976	+		CA265_RS15985	0.79	-0.2
4,012,977	-		CA265_RS15985	0.79	-2.0
4,012,985	+		CA265_RS15985	0.80	-0.0
4,012,985	+		CA265_RS15985	0.80	-0.6
4,012,986	-		CA265_RS15985	0.80	-0.6
4,013,105	-		CA265_RS15985	0.89	+0.0
4,013,123	-				-1.2
4,013,136	+				-1.5
4,013,137	-				-0.2
4,013,240	+				-1.9
4,013,357	-				+1.5
4,013,359	+				+0.3
4,013,365	+				-0.7
4,013,365	+				+0.2
4,013,368	-				-1.1
4,013,424	+				+0.2
4,013,425	-				+0.2
4,013,455	+				+0.3
4,013,456	-				-0.5
4,013,456	-				+0.9
4,015,504	-				+0.8
4,015,519	+				-1.2
4,015,524	-				-0.3
4,015,540	-				-0.4
4,015,583	-				-1.0
4,015,583	-				+0.0
4,015,672	+				+0.9
4,015,718	-				+1.3
4,015,719	+				-0.1
4,015,719	+				-1.0
4,015,724	+				+0.5
4,015,773	-				-0.2
4,015,773	-				+0.6
4,015,773	-				-1.3
4,015,774	+				-0.5
4,015,775	-				+0.7
4,015,800	+				+0.6
4,015,800	+				+1.1
4,015,800	+				-1.0
4,015,813	-				+1.1
4,015,813	-				+0.5
4,015,876	+		CA265_RS15995	0.17	-1.0
4,015,885	+		CA265_RS15995	0.19	+0.7
4,015,886	-		CA265_RS15995	0.19	-0.4
4,015,886	-		CA265_RS15995	0.19	+0.6
4,016,019	+		CA265_RS15995	0.41	+0.9
4,016,025	+		CA265_RS15995	0.42	-0.5
4,016,032	-		CA265_RS15995	0.43	+0.9
4,016,035	+		CA265_RS15995	0.43	-0.3
4,016,036	-		CA265_RS15995	0.43	+0.6
4,016,036	-		CA265_RS15995	0.43	-1.4
4,016,096	+		CA265_RS15995	0.53	-1.0
4,016,119	-		CA265_RS15995	0.57	-0.3
4,016,120	+		CA265_RS15995	0.57	-0.1
4,016,121	-		CA265_RS15995	0.57	-0.2
4,016,146	+		CA265_RS15995	0.61	+0.0
4,016,186	+		CA265_RS15995	0.68	-2.4
4,016,283	+		CA265_RS15995	0.84	+0.4
4,016,324	-				+0.5
4,016,331	-				-1.0
4,016,363	+				-0.6
4,016,366	+				-0.2
4,016,367	-				-1.2
4,016,383	+				-1.7
4,016,418	-				-1.6