Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15715

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
3,961,355	+		CA265_RS15710	0.64	-0.7
3,961,439	+		CA265_RS15710	0.68	-0.2
3,961,472	+		CA265_RS15710	0.69	-0.5
3,961,473	-		CA265_RS15710	0.69	+1.8
3,961,608	-		CA265_RS15710	0.76	-0.6
3,961,608	-		CA265_RS15710	0.76	-1.1
3,961,623	-		CA265_RS15710	0.76	-0.4
3,961,647	+		CA265_RS15710	0.77	-0.4
3,961,648	-		CA265_RS15710	0.77	-1.7
3,961,686	+		CA265_RS15710	0.79	+0.4
3,961,697	+		CA265_RS15710	0.80	+0.1
3,961,698	-		CA265_RS15710	0.80	+1.0
3,961,698	-		CA265_RS15710	0.80	+0.1
3,961,703	-		CA265_RS15710	0.80	+1.3
3,961,760	-		CA265_RS15710	0.83	-1.4
3,961,770	+		CA265_RS15710	0.83	-0.1
3,961,773	+		CA265_RS15710	0.83	-0.9
3,961,773	+		CA265_RS15710	0.83	+1.0
3,961,782	+		CA265_RS15710	0.84	+0.4
3,961,799	-		CA265_RS15710	0.85	-0.4
3,961,821	-		CA265_RS15710	0.86	+0.2
3,961,829	-		CA265_RS15710	0.86	-0.6
3,961,896	+		CA265_RS15710	0.89	+2.3
3,961,961	-				-0.8
3,961,999	+				+0.6
3,961,999	+				-1.8
3,961,999	+				-0.4
3,962,000	-				+1.1
3,962,037	+				-0.4
3,962,037	+				-0.5
3,962,170	+				-1.1
3,962,175	-				-0.4
3,962,187	+				-0.5
3,962,188	-				+0.3
3,962,188	-				+0.4
3,962,222	+				+0.5
3,962,222	+				-1.0
3,962,240	+				-1.6
3,962,240	+				-0.7
3,962,241	-				-0.1
3,962,288	+				+0.1
3,962,311	+				-1.0
3,962,311	+				-0.1
3,962,403	-				-0.4
3,962,465	+		CA265_RS15715	0.14	+0.3
3,962,468	-		CA265_RS15715	0.14	+0.3
3,962,471	+		CA265_RS15715	0.14	-0.4
3,962,471	+				+1.3
3,962,539	-		CA265_RS15715	0.20	-1.2
3,962,539	-		CA265_RS15715	0.20	-1.2
3,962,539	-		CA265_RS15715	0.20	+1.0
3,962,539	-		CA265_RS15715	0.20	+0.2
3,962,618	+		CA265_RS15715	0.26	-0.0
3,962,625	+		CA265_RS15715	0.26	+0.3
3,962,625	+		CA265_RS15715	0.26	-0.0
3,962,626	-		CA265_RS15715	0.26	+1.1
3,962,626	-		CA265_RS15715	0.26	+0.2
3,962,749	+		CA265_RS15715	0.36	+0.2
3,962,794	+		CA265_RS15715	0.40	-1.2
3,962,882	-		CA265_RS15715	0.47	-1.4
3,962,910	+		CA265_RS15715	0.49	-0.5
3,962,910	+		CA265_RS15715	0.49	-1.1
3,962,915	-		CA265_RS15715	0.50	+0.3
3,962,969	-		CA265_RS15715	0.54	-0.3
3,963,073	+		CA265_RS15715	0.62	+1.3
3,963,110	+		CA265_RS15715	0.65	-1.3
3,963,197	+		CA265_RS15715	0.72	+0.2
3,963,245	-		CA265_RS15715	0.76	-0.5
3,963,298	+		CA265_RS15715	0.80	+0.8
3,963,444	+				-1.7
3,963,444	+				-0.3
3,963,445	-				+0.3
3,963,475	+				+0.1
3,963,534	-				+0.9
3,963,592	+				-0.5
3,963,611	+				-1.6
3,963,612	-				+0.2
3,963,613	+				-0.8
3,963,614	-				+0.8
3,963,736	+		CA265_RS15720	0.26	-0.9
3,963,800	+		CA265_RS15720	0.43	+0.0
3,963,846	+		CA265_RS15720	0.55	-0.4
3,963,847	-		CA265_RS15720	0.55	+0.5
3,963,859	+		CA265_RS15720	0.58	+0.1
3,963,860	-		CA265_RS15720	0.58	-1.4
3,963,891	-		CA265_RS15720	0.66	-1.8
3,963,917	-				+2.3
3,963,987	+				-0.5
3,963,987	+				-0.6
3,964,097	-				+0.1
3,964,126	+				+0.5
3,964,194	-		CA265_RS15725	0.17	-0.1
3,964,232	+		CA265_RS15725	0.27	-0.5
3,964,237	-		CA265_RS15725	0.29	+0.5
3,964,237	-		CA265_RS15725	0.29	-0.2
3,964,327	+		CA265_RS15725	0.53	+0.5
3,964,358	+		CA265_RS15725	0.62	-0.1
3,964,377	+		CA265_RS15725	0.67	-1.2
3,964,378	-		CA265_RS15725	0.67	+0.2
3,964,378	-		CA265_RS15725	0.67	-0.2
3,964,378	-		CA265_RS15725	0.67	+0.1
3,964,410	+		CA265_RS15725	0.76	+0.7
3,964,410	+		CA265_RS15725	0.76	-1.0
3,964,411	-		CA265_RS15725	0.76	+0.5
3,964,501	+				-1.6