Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11245

Experiment: R2A with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.025 mg/ml
2,781,063	+				-0.1
2,781,110	+				+0.3
2,781,111	-				+0.2
2,781,133	-				-0.1
2,781,193	+				+0.0
2,781,242	-				+0.2
2,781,312	+				+1.2
2,781,394	+		CA265_RS11240	0.14	+0.3
2,781,395	-		CA265_RS11240	0.14	-1.3
2,781,408	-		CA265_RS11240	0.16	-0.5
2,781,503	-		CA265_RS11240	0.29	-0.3
2,781,503	-		CA265_RS11240	0.29	+0.1
2,781,505	-		CA265_RS11240	0.29	+0.6
2,781,588	+		CA265_RS11240	0.41	+0.1
2,781,590	+		CA265_RS11240	0.42	-0.3
2,781,590	+		CA265_RS11240	0.42	-0.2
2,781,607	-		CA265_RS11240	0.44	-0.7
2,781,636	-		CA265_RS11240	0.48	-0.3
2,781,650	-		CA265_RS11240	0.50	+0.2
2,781,729	+		CA265_RS11240	0.62	+1.3
2,781,820	-		CA265_RS11240	0.75	+0.0
2,781,833	-		CA265_RS11240	0.76	-1.2
2,781,833	-		CA265_RS11240	0.76	-0.6
2,781,833	-		CA265_RS11240	0.76	-0.6
2,781,833	-		CA265_RS11240	0.76	-2.3
2,781,852	-		CA265_RS11240	0.79	-0.1
2,781,879	-		CA265_RS11240	0.83	-0.3
2,781,938	-				-0.3
2,782,014	-				-0.3
2,782,019	+				-0.1
2,782,041	-				-0.4
2,782,064	-				-0.5
2,782,076	-				-2.0
2,782,116	+				+1.0
2,782,167	-		CA265_RS11245	0.12	+0.2
2,782,192	+		CA265_RS11245	0.15	-0.2
2,782,192	+		CA265_RS11245	0.15	-0.4
2,782,257	+		CA265_RS11245	0.23	-0.3
2,782,258	-		CA265_RS11245	0.23	-0.3
2,782,345	+		CA265_RS11245	0.33	+0.6
2,782,349	+		CA265_RS11245	0.34	+0.3
2,782,388	-		CA265_RS11245	0.38	+0.1
2,782,454	+		CA265_RS11245	0.46	-0.1
2,782,455	-		CA265_RS11245	0.46	-0.5
2,782,458	+		CA265_RS11245	0.46	-0.1
2,782,458	+		CA265_RS11245	0.46	+0.2
2,782,578	-		CA265_RS11245	0.61	+0.8
2,782,598	+		CA265_RS11245	0.63	-1.0
2,782,603	+		CA265_RS11245	0.63	-1.3
2,782,603	+		CA265_RS11245	0.63	-1.2
2,782,603	+		CA265_RS11245	0.63	+0.6
2,782,604	-		CA265_RS11245	0.64	-0.3
2,782,604	-				+1.4
2,782,604	-		CA265_RS11245	0.64	+1.2
2,782,607	-		CA265_RS11245	0.64	-0.7
2,782,627	+		CA265_RS11245	0.66	+0.0
2,782,628	-		CA265_RS11245	0.66	-1.2
2,782,628	-		CA265_RS11245	0.66	-0.6
2,782,729	+		CA265_RS11245	0.78	+0.0
2,782,881	-				+2.0
2,782,884	-				+0.0
2,782,916	-				-0.6
2,782,916	-				+0.2
2,782,916	-				-0.8
2,783,001	-				-1.7
2,783,024	-				-0.5
2,783,134	-				-1.6
2,783,162	+				+0.5
2,783,185	+				-2.5
2,783,199	-				+1.0
2,783,325	-		CA265_RS11250	0.19	-0.9
2,783,329	+		CA265_RS11250	0.19	-0.2
2,783,334	+		CA265_RS11250	0.20	+0.1
2,783,443	-		CA265_RS11250	0.30	+0.2
2,783,515	+		CA265_RS11250	0.37	-2.5
2,783,517	+		CA265_RS11250	0.37	+0.3
2,783,518	-		CA265_RS11250	0.37	-2.0
2,783,533	+		CA265_RS11250	0.38	-0.7
2,783,629	+		CA265_RS11250	0.47	-0.6
2,783,629	+		CA265_RS11250	0.47	-0.9
2,783,637	-		CA265_RS11250	0.48	+0.2
2,783,777	+		CA265_RS11250	0.61	-0.5
2,783,806	+		CA265_RS11250	0.64	-0.6
2,783,807	-		CA265_RS11250	0.64	-0.8
2,783,830	+		CA265_RS11250	0.66	-0.8
2,783,831	-		CA265_RS11250	0.66	-0.5
2,783,875	+		CA265_RS11250	0.70	-1.0