Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4194 and Ac3H11_4195 overlap by 38 nucleotides Ac3H11_4195 and Ac3H11_4196 are separated by 258 nucleotides
Ac3H11_4194 - DNA polymerase-like protein PA0670, at 454,413 to 455,957
_4194
Ac3H11_4195 - RecA/RadA recombinase, at 455,920 to 456,783
_4195
Ac3H11_4196 - metal dependent phosphohydrolase, at 457,042 to 457,290
_4196
Position (kb) 455
456
457 Strain fitness (log2 ratio) -1
0
1
2 at 455.090 kb on - strand, within Ac3H11_4194 at 456.035 kb on + strand, within Ac3H11_4195 at 456.036 kb on - strand, within Ac3H11_4195 at 456.198 kb on + strand, within Ac3H11_4195 at 456.199 kb on - strand, within Ac3H11_4195 at 456.229 kb on + strand, within Ac3H11_4195 at 456.229 kb on + strand, within Ac3H11_4195 at 456.230 kb on - strand, within Ac3H11_4195 at 456.230 kb on - strand, within Ac3H11_4195 at 456.658 kb on + strand, within Ac3H11_4195 at 456.658 kb on + strand, within Ac3H11_4195 at 456.658 kb on + strand, within Ac3H11_4195 at 456.813 kb on + strand at 456.813 kb on + strand at 456.813 kb on + strand at 456.813 kb on + strand at 456.843 kb on + strand at 456.843 kb on + strand at 456.894 kb on - strand at 456.957 kb on + strand at 456.957 kb on + strand at 456.958 kb on - strand at 456.958 kb on - strand at 456.958 kb on - strand at 456.958 kb on - strand at 457.040 kb on + strand at 457.041 kb on - strand at 457.228 kb on + strand, within Ac3H11_4196 at 457.229 kb on - strand, within Ac3H11_4196 at 457.229 kb on - strand, within Ac3H11_4196 at 457.317 kb on + strand at 457.326 kb on - strand at 457.340 kb on - strand at 457.345 kb on + strand at 457.345 kb on + strand at 457.346 kb on - strand at 457.584 kb on + strand at 457.597 kb on + strand at 457.597 kb on + strand at 457.597 kb on + strand at 457.613 kb on + strand at 457.613 kb on + strand at 457.614 kb on - strand at 457.614 kb on - strand at 457.614 kb on - strand at 457.623 kb on + strand at 457.623 kb on + strand at 457.623 kb on + strand at 457.624 kb on - strand at 457.624 kb on - strand at 457.679 kb on + strand at 457.679 kb on + strand at 457.679 kb on + strand at 457.679 kb on + strand at 457.680 kb on - strand at 457.680 kb on - strand at 457.680 kb on - strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.690 kb on - strand at 457.690 kb on - strand at 457.690 kb on - strand at 457.690 kb on - strand at 457.748 kb on + strand at 457.748 kb on + strand at 457.749 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 455,090 - Ac3H11_4194 0.44 +0.2 456,035 + Ac3H11_4195 0.13 -0.2 456,036 - Ac3H11_4195 0.13 +1.1 456,198 + Ac3H11_4195 0.32 +1.2 456,199 - Ac3H11_4195 0.32 +0.5 456,229 + Ac3H11_4195 0.36 +0.5 456,229 + Ac3H11_4195 0.36 +0.6 456,230 - Ac3H11_4195 0.36 -0.9 456,230 - Ac3H11_4195 0.36 +0.1 456,658 + Ac3H11_4195 0.85 +0.5 456,658 + Ac3H11_4195 0.85 +0.7 456,658 + Ac3H11_4195 0.85 +0.6 456,813 + -0.7 456,813 + +0.7 456,813 + +0.3 456,813 + +1.0 456,843 + +0.3 456,843 + -0.1 456,894 - -1.4 456,957 + +0.0 456,957 + +1.1 456,958 - -0.4 456,958 - +1.5 456,958 - +0.8 456,958 - -0.1 457,040 + -0.4 457,041 - +1.6 457,228 + Ac3H11_4196 0.75 +0.9 457,229 - Ac3H11_4196 0.75 +1.8 457,229 - Ac3H11_4196 0.75 +1.0 457,317 + +0.8 457,326 - +0.2 457,340 - -0.3 457,345 + +0.1 457,345 + +0.1 457,346 - +0.2 457,584 + +1.2 457,597 + -0.4 457,597 + +0.9 457,597 + +0.5 457,613 + +0.6 457,613 + +0.4 457,614 - -0.2 457,614 - +0.1 457,614 - -1.2 457,623 + +0.3 457,623 + +0.3 457,623 + -0.4 457,624 - +0.3 457,624 - +0.8 457,679 + +0.1 457,679 + +0.8 457,679 + +0.3 457,679 + +1.1 457,680 - +0.5 457,680 - +0.1 457,680 - +0.3 457,689 + +0.2 457,689 + -0.2 457,689 + +0.1 457,689 + +0.4 457,689 + +0.4 457,689 + +1.1 457,690 - +0.6 457,690 - +0.3 457,690 - +0.4 457,690 - +0.9 457,748 + +0.1 457,748 + -0.6 457,749 - -0.1
Or see this region's nucleotide sequence