Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19900 and ABZR86_RS19905 are separated by 154 nucleotides ABZR86_RS19905 and ABZR86_RS19910 are separated by 10 nucleotides
ABZR86_RS19900: ABZR86_RS19900 - hemolysin family protein, at 474,970 to 476,292
_RS19900
ABZR86_RS19905: ABZR86_RS19905 - DUF47 domain-containing protein, at 476,447 to 477,076
_RS19905
ABZR86_RS19910: ABZR86_RS19910 - inorganic phosphate transporter, at 477,087 to 478,205
_RS19910
Position (kb) 476
477
478 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 475.542 kb on - strand, within ABZR86_RS19900 at 475.550 kb on + strand, within ABZR86_RS19900 at 475.559 kb on + strand, within ABZR86_RS19900 at 475.560 kb on - strand, within ABZR86_RS19900 at 475.560 kb on - strand, within ABZR86_RS19900 at 476.001 kb on - strand, within ABZR86_RS19900 at 476.001 kb on - strand, within ABZR86_RS19900 at 476.333 kb on + strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.395 kb on - strand at 476.399 kb on + strand at 476.399 kb on + strand at 476.399 kb on + strand at 476.400 kb on - strand at 476.400 kb on - strand at 476.489 kb on + strand at 476.490 kb on - strand at 476.490 kb on - strand at 476.705 kb on + strand, within ABZR86_RS19905 at 476.706 kb on - strand, within ABZR86_RS19905 at 476.706 kb on - strand, within ABZR86_RS19905 at 476.745 kb on - strand, within ABZR86_RS19905 at 476.948 kb on + strand, within ABZR86_RS19905 at 476.948 kb on + strand, within ABZR86_RS19905 at 476.948 kb on + strand, within ABZR86_RS19905 at 476.949 kb on - strand, within ABZR86_RS19905 at 476.949 kb on - strand, within ABZR86_RS19905 at 477.051 kb on - strand at 477.051 kb on - strand at 477.133 kb on - strand at 477.133 kb on - strand at 477.133 kb on - strand at 477.133 kb on - strand at 477.588 kb on + strand, within ABZR86_RS19910 at 477.588 kb on + strand, within ABZR86_RS19910
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 475,542 - ABZR86_RS19900 0.43 -0.5 475,550 + ABZR86_RS19900 0.44 +0.2 475,559 + ABZR86_RS19900 0.45 -0.7 475,560 - ABZR86_RS19900 0.45 -0.2 475,560 - ABZR86_RS19900 0.45 +0.9 476,001 - ABZR86_RS19900 0.78 -0.9 476,001 - ABZR86_RS19900 0.78 -1.0 476,333 + -0.5 476,334 - +1.6 476,334 - +0.1 476,334 - +0.2 476,334 - +0.8 476,334 - -0.2 476,395 - -0.2 476,399 + +0.6 476,399 + -0.2 476,399 + +0.5 476,400 - +1.1 476,400 - -0.2 476,489 + -1.2 476,490 - -2.4 476,490 - -1.9 476,705 + ABZR86_RS19905 0.41 -1.2 476,706 - ABZR86_RS19905 0.41 -1.3 476,706 - ABZR86_RS19905 0.41 -0.0 476,745 - ABZR86_RS19905 0.47 -3.0 476,948 + ABZR86_RS19905 0.80 -1.8 476,948 + ABZR86_RS19905 0.80 +2.1 476,948 + ABZR86_RS19905 0.80 -1.3 476,949 - ABZR86_RS19905 0.80 -0.5 476,949 - ABZR86_RS19905 0.80 -3.0 477,051 - -0.9 477,051 - +0.5 477,133 - -2.3 477,133 - -2.1 477,133 - -1.2 477,133 - -1.3 477,588 + ABZR86_RS19910 0.45 -1.8 477,588 + ABZR86_RS19910 0.45 -0.8
Or see this region's nucleotide sequence