Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11535 and ABZR86_RS11540 are separated by 407 nucleotides ABZR86_RS11540 and ABZR86_RS11545 are separated by 86 nucleotides
ABZR86_RS11535: ABZR86_RS11535 - protease pro-enzyme activation domain-containing protein, at 2,574,780 to 2,576,657
_RS11535
ABZR86_RS11540: ABZR86_RS11540 - methionine adenosyltransferase, at 2,577,065 to 2,578,264
_RS11540
ABZR86_RS11545: ABZR86_RS11545 - ATP-binding cassette domain-containing protein, at 2,578,351 to 2,580,219
_RS11545
Position (kb)
2577
2578
2579 Strain fitness (log2 ratio)
-1
0
1 at 2576.065 kb on - strand, within ABZR86_RS11535 at 2576.083 kb on + strand, within ABZR86_RS11535 at 2576.221 kb on + strand, within ABZR86_RS11535 at 2576.221 kb on + strand, within ABZR86_RS11535 at 2576.221 kb on + strand, within ABZR86_RS11535 at 2576.222 kb on - strand, within ABZR86_RS11535 at 2576.260 kb on + strand, within ABZR86_RS11535 at 2576.261 kb on - strand, within ABZR86_RS11535 at 2576.261 kb on - strand, within ABZR86_RS11535 at 2576.290 kb on + strand, within ABZR86_RS11535 at 2576.290 kb on + strand, within ABZR86_RS11535 at 2576.290 kb on + strand, within ABZR86_RS11535 at 2576.290 kb on + strand, within ABZR86_RS11535 at 2576.291 kb on - strand, within ABZR86_RS11535 at 2576.452 kb on + strand, within ABZR86_RS11535 at 2576.452 kb on + strand, within ABZR86_RS11535 at 2576.453 kb on - strand, within ABZR86_RS11535 at 2576.453 kb on - strand, within ABZR86_RS11535 at 2576.453 kb on - strand, within ABZR86_RS11535 at 2576.453 kb on - strand, within ABZR86_RS11535 at 2576.468 kb on - strand, within ABZR86_RS11535 at 2576.468 kb on - strand, within ABZR86_RS11535 at 2576.506 kb on + strand at 2576.648 kb on + strand at 2576.709 kb on + strand at 2576.710 kb on - strand at 2576.758 kb on + strand at 2576.759 kb on - strand at 2576.759 kb on - strand at 2576.759 kb on - strand at 2576.759 kb on - strand at 2576.867 kb on + strand at 2576.868 kb on - strand at 2576.868 kb on - strand at 2576.868 kb on - strand at 2576.984 kb on + strand at 2576.984 kb on + strand at 2576.984 kb on + strand at 2576.984 kb on + strand at 2576.985 kb on - strand at 2576.985 kb on - strand at 2577.010 kb on + strand at 2577.010 kb on + strand at 2577.010 kb on + strand at 2577.010 kb on + strand at 2577.010 kb on + strand at 2577.011 kb on - strand at 2577.011 kb on - strand at 2577.011 kb on - strand at 2577.011 kb on - strand at 2577.011 kb on - strand at 2577.011 kb on - strand at 2577.011 kb on - strand at 2578.262 kb on + strand at 2578.262 kb on + strand at 2578.263 kb on - strand at 2578.263 kb on - strand at 2578.263 kb on - strand at 2578.263 kb on - strand at 2578.344 kb on + strand at 2578.345 kb on - strand at 2578.446 kb on - strand at 2578.446 kb on - strand at 2578.446 kb on - strand at 2578.446 kb on - strand at 2578.598 kb on + strand, within ABZR86_RS11545 at 2578.598 kb on + strand, within ABZR86_RS11545 at 2579.042 kb on - strand, within ABZR86_RS11545 at 2579.050 kb on + strand, within ABZR86_RS11545 at 2579.051 kb on - strand, within ABZR86_RS11545 at 2579.051 kb on - strand, within ABZR86_RS11545
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 2,576,065 - ABZR86_RS11535 0.68 +0.2 2,576,083 + ABZR86_RS11535 0.69 +1.0 2,576,221 + ABZR86_RS11535 0.77 +0.5 2,576,221 + ABZR86_RS11535 0.77 -0.2 2,576,221 + ABZR86_RS11535 0.77 +0.3 2,576,222 - ABZR86_RS11535 0.77 -1.1 2,576,260 + ABZR86_RS11535 0.79 -0.5 2,576,261 - ABZR86_RS11535 0.79 -0.4 2,576,261 - ABZR86_RS11535 0.79 -0.4 2,576,290 + ABZR86_RS11535 0.80 +0.1 2,576,290 + ABZR86_RS11535 0.80 -0.2 2,576,290 + ABZR86_RS11535 0.80 +0.2 2,576,290 + ABZR86_RS11535 0.80 +0.4 2,576,291 - ABZR86_RS11535 0.80 -0.3 2,576,452 + ABZR86_RS11535 0.89 +0.4 2,576,452 + ABZR86_RS11535 0.89 -0.6 2,576,453 - ABZR86_RS11535 0.89 -1.3 2,576,453 - ABZR86_RS11535 0.89 -0.1 2,576,453 - ABZR86_RS11535 0.89 +0.3 2,576,453 - ABZR86_RS11535 0.89 -0.1 2,576,468 - ABZR86_RS11535 0.90 +0.2 2,576,468 - ABZR86_RS11535 0.90 -0.7 2,576,506 + -0.7 2,576,648 + -0.0 2,576,709 + +0.5 2,576,710 - +0.4 2,576,758 + -1.7 2,576,759 - +0.1 2,576,759 - +0.7 2,576,759 - -0.5 2,576,759 - -0.4 2,576,867 + +0.4 2,576,868 - -0.5 2,576,868 - -0.7 2,576,868 - +0.2 2,576,984 + -0.9 2,576,984 + -1.2 2,576,984 + +1.2 2,576,984 + -0.4 2,576,985 - -1.2 2,576,985 - -0.6 2,577,010 + -0.5 2,577,010 + -0.3 2,577,010 + -1.0 2,577,010 + -0.1 2,577,010 + -0.4 2,577,011 - -1.1 2,577,011 - -1.7 2,577,011 - -0.8 2,577,011 - -0.4 2,577,011 - +0.1 2,577,011 - -0.6 2,577,011 - -1.2 2,578,262 + +0.1 2,578,262 + +0.6 2,578,263 - -0.8 2,578,263 - -0.3 2,578,263 - +1.3 2,578,263 - +0.5 2,578,344 + -0.4 2,578,345 - +0.3 2,578,446 - +0.5 2,578,446 - -0.2 2,578,446 - +0.8 2,578,446 - -0.4 2,578,598 + ABZR86_RS11545 0.13 -1.3 2,578,598 + ABZR86_RS11545 0.13 +0.1 2,579,042 - ABZR86_RS11545 0.37 +0.4 2,579,050 + ABZR86_RS11545 0.37 -0.4 2,579,051 - ABZR86_RS11545 0.37 -0.3 2,579,051 - ABZR86_RS11545 0.37 +0.4
Or see this region's nucleotide sequence