Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00820 and ABZR86_RS00825 are separated by 99 nucleotides ABZR86_RS00825 and ABZR86_RS00830 are separated by 106 nucleotides ABZR86_RS00830 and ABZR86_RS00835 are separated by 5 nucleotides
ABZR86_RS00820: ABZR86_RS00820 - pantoate--beta-alanine ligase, at 158,950 to 159,795
_RS00820
ABZR86_RS00825: ABZR86_RS00825 - aspartate 1-decarboxylase, at 159,895 to 160,281
_RS00825
ABZR86_RS00830: ABZR86_RS00830 - glucose-6-phosphate isomerase, at 160,388 to 162,025
_RS00830
ABZR86_RS00835: ABZR86_RS00835 - tRNA epoxyqueuosine(34) reductase QueG, at 162,031 to 163,104
_RS00835
Position (kb) 160
161
162
163 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 159.807 kb on + strand at 159.808 kb on - strand at 159.864 kb on + strand at 160.326 kb on + strand at 160.350 kb on + strand at 160.351 kb on - strand at 160.351 kb on - strand at 160.379 kb on + strand at 160.380 kb on - strand at 160.380 kb on - strand at 160.380 kb on - strand at 160.380 kb on - strand at 160.940 kb on + strand, within ABZR86_RS00830 at 160.940 kb on + strand, within ABZR86_RS00830 at 160.941 kb on - strand, within ABZR86_RS00830 at 161.060 kb on + strand, within ABZR86_RS00830 at 161.061 kb on - strand, within ABZR86_RS00830 at 161.156 kb on + strand, within ABZR86_RS00830 at 161.156 kb on + strand, within ABZR86_RS00830 at 161.157 kb on - strand, within ABZR86_RS00830 at 161.340 kb on - strand, within ABZR86_RS00830 at 161.340 kb on - strand, within ABZR86_RS00830 at 161.387 kb on + strand, within ABZR86_RS00830 at 161.417 kb on + strand, within ABZR86_RS00830 at 161.417 kb on + strand, within ABZR86_RS00830 at 161.418 kb on - strand, within ABZR86_RS00830 at 161.537 kb on + strand, within ABZR86_RS00830 at 161.537 kb on + strand, within ABZR86_RS00830 at 161.537 kb on + strand, within ABZR86_RS00830 at 161.537 kb on + strand, within ABZR86_RS00830 at 161.538 kb on - strand, within ABZR86_RS00830 at 161.538 kb on - strand, within ABZR86_RS00830 at 161.538 kb on - strand, within ABZR86_RS00830 at 161.538 kb on - strand, within ABZR86_RS00830 at 161.566 kb on + strand, within ABZR86_RS00830 at 161.834 kb on + strand, within ABZR86_RS00830 at 161.835 kb on - strand, within ABZR86_RS00830 at 162.032 kb on + strand at 162.032 kb on + strand at 162.033 kb on - strand at 162.033 kb on - strand at 162.162 kb on + strand, within ABZR86_RS00835 at 162.163 kb on - strand, within ABZR86_RS00835 at 162.425 kb on + strand, within ABZR86_RS00835 at 162.426 kb on - strand, within ABZR86_RS00835 at 162.426 kb on - strand, within ABZR86_RS00835 at 162.426 kb on - strand, within ABZR86_RS00835 at 162.456 kb on - strand, within ABZR86_RS00835 at 162.557 kb on + strand, within ABZR86_RS00835 at 162.557 kb on + strand, within ABZR86_RS00835 at 162.557 kb on + strand, within ABZR86_RS00835 at 162.557 kb on + strand, within ABZR86_RS00835 at 162.558 kb on - strand, within ABZR86_RS00835 at 162.558 kb on - strand, within ABZR86_RS00835 at 162.578 kb on + strand, within ABZR86_RS00835 at 162.578 kb on + strand, within ABZR86_RS00835 at 162.579 kb on - strand, within ABZR86_RS00835 at 162.579 kb on - strand, within ABZR86_RS00835 at 162.579 kb on - strand, within ABZR86_RS00835 at 162.579 kb on - strand, within ABZR86_RS00835 at 162.579 kb on - strand, within ABZR86_RS00835 at 162.761 kb on + strand, within ABZR86_RS00835 at 162.761 kb on + strand, within ABZR86_RS00835 at 162.762 kb on - strand, within ABZR86_RS00835 at 162.791 kb on + strand, within ABZR86_RS00835 at 162.848 kb on + strand, within ABZR86_RS00835 at 162.848 kb on + strand, within ABZR86_RS00835 at 162.848 kb on + strand, within ABZR86_RS00835 at 162.848 kb on + strand, within ABZR86_RS00835 at 162.848 kb on + strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.849 kb on - strand, within ABZR86_RS00835 at 162.932 kb on + strand, within ABZR86_RS00835 at 162.932 kb on + strand, within ABZR86_RS00835 at 162.932 kb on + strand, within ABZR86_RS00835 at 162.932 kb on + strand, within ABZR86_RS00835 at 162.932 kb on + strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835 at 162.933 kb on - strand, within ABZR86_RS00835
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 159,807 + +0.5 159,808 - -0.2 159,864 + +0.1 160,326 + +0.2 160,350 + +1.8 160,351 - -0.2 160,351 - -0.1 160,379 + +1.1 160,380 - -2.6 160,380 - -0.9 160,380 - -1.8 160,380 - -1.6 160,940 + ABZR86_RS00830 0.34 -3.6 160,940 + ABZR86_RS00830 0.34 -2.0 160,941 - ABZR86_RS00830 0.34 -2.7 161,060 + ABZR86_RS00830 0.41 -4.3 161,061 - ABZR86_RS00830 0.41 -1.2 161,156 + ABZR86_RS00830 0.47 -2.3 161,156 + ABZR86_RS00830 0.47 -1.5 161,157 - ABZR86_RS00830 0.47 -3.5 161,340 - ABZR86_RS00830 0.58 -2.6 161,340 - ABZR86_RS00830 0.58 -2.9 161,387 + ABZR86_RS00830 0.61 +0.8 161,417 + ABZR86_RS00830 0.63 -1.8 161,417 + ABZR86_RS00830 0.63 -3.9 161,418 - ABZR86_RS00830 0.63 -3.2 161,537 + ABZR86_RS00830 0.70 -3.7 161,537 + ABZR86_RS00830 0.70 -2.3 161,537 + ABZR86_RS00830 0.70 -3.6 161,537 + ABZR86_RS00830 0.70 -1.8 161,538 - ABZR86_RS00830 0.70 -3.8 161,538 - ABZR86_RS00830 0.70 -2.6 161,538 - ABZR86_RS00830 0.70 -2.6 161,538 - ABZR86_RS00830 0.70 -1.8 161,566 + ABZR86_RS00830 0.72 -2.8 161,834 + ABZR86_RS00830 0.88 -5.0 161,835 - ABZR86_RS00830 0.88 -2.6 162,032 + +0.1 162,032 + -0.8 162,033 - +0.1 162,033 - +1.0 162,162 + ABZR86_RS00835 0.12 -2.4 162,163 - ABZR86_RS00835 0.12 +0.8 162,425 + ABZR86_RS00835 0.37 +0.3 162,426 - ABZR86_RS00835 0.37 -0.2 162,426 - ABZR86_RS00835 0.37 -0.6 162,426 - ABZR86_RS00835 0.37 -0.4 162,456 - ABZR86_RS00835 0.40 +0.3 162,557 + ABZR86_RS00835 0.49 +1.4 162,557 + ABZR86_RS00835 0.49 -0.6 162,557 + ABZR86_RS00835 0.49 -0.1 162,557 + ABZR86_RS00835 0.49 +0.1 162,558 - ABZR86_RS00835 0.49 +0.5 162,558 - ABZR86_RS00835 0.49 -0.2 162,578 + ABZR86_RS00835 0.51 -0.2 162,578 + ABZR86_RS00835 0.51 +0.1 162,579 - ABZR86_RS00835 0.51 +0.2 162,579 - ABZR86_RS00835 0.51 -0.2 162,579 - ABZR86_RS00835 0.51 -0.8 162,579 - ABZR86_RS00835 0.51 -0.3 162,579 - ABZR86_RS00835 0.51 -0.4 162,761 + ABZR86_RS00835 0.68 -0.1 162,761 + ABZR86_RS00835 0.68 -0.5 162,762 - ABZR86_RS00835 0.68 -0.1 162,791 + ABZR86_RS00835 0.71 +0.1 162,848 + ABZR86_RS00835 0.76 -1.8 162,848 + ABZR86_RS00835 0.76 -0.3 162,848 + ABZR86_RS00835 0.76 -1.4 162,848 + ABZR86_RS00835 0.76 +0.4 162,848 + ABZR86_RS00835 0.76 +0.2 162,849 - ABZR86_RS00835 0.76 +0.3 162,849 - ABZR86_RS00835 0.76 +0.1 162,849 - ABZR86_RS00835 0.76 -0.5 162,849 - ABZR86_RS00835 0.76 +0.7 162,849 - ABZR86_RS00835 0.76 +0.3 162,849 - ABZR86_RS00835 0.76 -0.3 162,849 - ABZR86_RS00835 0.76 +0.0 162,849 - ABZR86_RS00835 0.76 -0.3 162,849 - ABZR86_RS00835 0.76 +0.5 162,849 - ABZR86_RS00835 0.76 -0.1 162,849 - ABZR86_RS00835 0.76 +0.4 162,932 + ABZR86_RS00835 0.84 -0.5 162,932 + ABZR86_RS00835 0.84 +0.2 162,932 + ABZR86_RS00835 0.84 -0.2 162,932 + ABZR86_RS00835 0.84 +0.8 162,932 + ABZR86_RS00835 0.84 -0.2 162,933 - ABZR86_RS00835 0.84 -0.2 162,933 - ABZR86_RS00835 0.84 -0.5 162,933 - ABZR86_RS00835 0.84 +0.6 162,933 - ABZR86_RS00835 0.84 -1.3 162,933 - ABZR86_RS00835 0.84 +0.1 162,933 - ABZR86_RS00835 0.84 +0.5 162,933 - ABZR86_RS00835 0.84 +1.1 162,933 - ABZR86_RS00835 0.84 +0.1 162,933 - ABZR86_RS00835 0.84 -0.3 162,933 - ABZR86_RS00835 0.84 -0.6 162,933 - ABZR86_RS00835 0.84 +0.5
Or see this region's nucleotide sequence