Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1225 and DvMF_1226 are separated by 237 nucleotides DvMF_1226 and DvMF_1227 are separated by 582 nucleotides
DvMF_1225: DvMF_1225 - signal transduction histidine kinase, LytS (RefSeq), at 1,509,712 to 1,511,523
_1225
DvMF_1226: DvMF_1226 - carbon starvation protein CstA (RefSeq), at 1,511,761 to 1,513,164
_1226
DvMF_1227: DvMF_1227 - carbon starvation protein CstA (RefSeq), at 1,513,747 to 1,515,558
_1227
Position (kb)
1511
1512
1513
1514 Strain fitness (log2 ratio)
-2
-1
0
1 at 1510.843 kb on + strand, within DvMF_1225 at 1511.085 kb on - strand, within DvMF_1225 at 1511.248 kb on + strand, within DvMF_1225 at 1511.574 kb on - strand at 1511.771 kb on + strand at 1511.873 kb on - strand at 1511.968 kb on + strand, within DvMF_1226 at 1511.983 kb on - strand, within DvMF_1226 at 1512.516 kb on - strand, within DvMF_1226 at 1512.594 kb on + strand, within DvMF_1226 at 1512.826 kb on + strand, within DvMF_1226 at 1512.861 kb on - strand, within DvMF_1226 at 1512.870 kb on + strand, within DvMF_1226 at 1513.166 kb on - strand at 1513.242 kb on - strand at 1513.252 kb on - strand at 1513.323 kb on - strand at 1513.449 kb on - strand at 1513.983 kb on + strand, within DvMF_1227 at 1514.032 kb on - strand, within DvMF_1227 at 1514.041 kb on + strand, within DvMF_1227 at 1514.041 kb on + strand, within DvMF_1227 at 1514.061 kb on - strand, within DvMF_1227 at 1514.091 kb on - strand, within DvMF_1227 at 1514.091 kb on - strand, within DvMF_1227 at 1514.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,510,843 + DvMF_1225 0.62 -0.9 1,511,085 - DvMF_1225 0.76 -0.9 1,511,248 + DvMF_1225 0.85 -0.1 1,511,574 - -0.3 1,511,771 + -0.1 1,511,873 - -0.6 1,511,968 + DvMF_1226 0.15 +0.1 1,511,983 - DvMF_1226 0.16 -1.0 1,512,516 - DvMF_1226 0.54 -0.4 1,512,594 + DvMF_1226 0.59 -0.3 1,512,826 + DvMF_1226 0.76 -0.1 1,512,861 - DvMF_1226 0.78 -0.4 1,512,870 + DvMF_1226 0.79 +0.2 1,513,166 - -0.2 1,513,242 - +0.0 1,513,252 - -0.6 1,513,323 - -0.5 1,513,449 - -0.2 1,513,983 + DvMF_1227 0.13 +0.1 1,514,032 - DvMF_1227 0.16 -0.4 1,514,041 + DvMF_1227 0.16 -0.3 1,514,041 + DvMF_1227 0.16 +0.1 1,514,061 - DvMF_1227 0.17 +0.4 1,514,091 - DvMF_1227 0.19 -0.4 1,514,091 - DvMF_1227 0.19 +0.3 1,514,091 - -2.2
Or see this region's nucleotide sequence