Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03625 and AZOBR_RS03630 are separated by 456 nucleotides AZOBR_RS03630 and AZOBR_RS03635 are separated by 73 nucleotides AZOBR_RS03635 and AZOBR_RS03640 are separated by 208 nucleotides AZOBR_RS03640 and AZOBR_RS03645 are separated by 21 nucleotides
AZOBR_RS03625: AZOBR_RS03625 - 5-aminolevulinate synthase, at 762,376 to 763,590
_RS03625
AZOBR_RS03630: AZOBR_RS03630 - hypothetical protein, at 764,047 to 764,460
_RS03630
AZOBR_RS03635: AZOBR_RS03635 - aminotransferase, at 764,534 to 765,949
_RS03635
AZOBR_RS03640: AZOBR_RS03640 - glutathione S-transferase, at 766,158 to 766,793
_RS03640
AZOBR_RS03645: AZOBR_RS03645 - signal peptide protein, at 766,815 to 768,563
_RS03645
Position (kb) 764
765
766 Strain fitness (log2 ratio) -2
-1
0
1
2 at 763.664 kb on - strand at 763.776 kb on + strand at 763.776 kb on + strand at 763.777 kb on - strand at 763.777 kb on - strand at 764.302 kb on + strand, within AZOBR_RS03630 at 764.302 kb on + strand, within AZOBR_RS03630 at 764.302 kb on + strand, within AZOBR_RS03630 at 764.303 kb on - strand, within AZOBR_RS03630 at 764.303 kb on - strand, within AZOBR_RS03630 at 764.323 kb on + strand, within AZOBR_RS03630 at 764.323 kb on + strand, within AZOBR_RS03630 at 764.323 kb on + strand, within AZOBR_RS03630 at 764.323 kb on + strand, within AZOBR_RS03630 at 764.324 kb on - strand, within AZOBR_RS03630 at 764.325 kb on + strand, within AZOBR_RS03630 at 764.325 kb on + strand, within AZOBR_RS03630 at 764.326 kb on - strand, within AZOBR_RS03630 at 764.326 kb on - strand, within AZOBR_RS03630 at 764.880 kb on + strand, within AZOBR_RS03635 at 764.881 kb on - strand, within AZOBR_RS03635 at 764.931 kb on + strand, within AZOBR_RS03635 at 764.931 kb on + strand, within AZOBR_RS03635 at 764.931 kb on + strand, within AZOBR_RS03635 at 764.932 kb on - strand, within AZOBR_RS03635 at 764.932 kb on - strand, within AZOBR_RS03635 at 764.932 kb on - strand, within AZOBR_RS03635 at 764.938 kb on - strand, within AZOBR_RS03635 at 765.027 kb on + strand, within AZOBR_RS03635 at 765.153 kb on + strand, within AZOBR_RS03635 at 765.186 kb on + strand, within AZOBR_RS03635 at 765.187 kb on - strand, within AZOBR_RS03635 at 765.345 kb on + strand, within AZOBR_RS03635 at 765.511 kb on - strand, within AZOBR_RS03635 at 765.657 kb on + strand, within AZOBR_RS03635 at 765.657 kb on + strand, within AZOBR_RS03635 at 765.657 kb on + strand, within AZOBR_RS03635 at 765.658 kb on - strand, within AZOBR_RS03635 at 765.658 kb on - strand, within AZOBR_RS03635 at 765.658 kb on - strand, within AZOBR_RS03635 at 765.658 kb on - strand, within AZOBR_RS03635 at 765.658 kb on - strand, within AZOBR_RS03635 at 765.756 kb on + strand, within AZOBR_RS03635 at 765.757 kb on - strand, within AZOBR_RS03635 at 765.861 kb on + strand at 765.862 kb on - strand at 765.862 kb on - strand at 765.956 kb on + strand at 766.038 kb on + strand at 766.038 kb on + strand at 766.039 kb on - strand at 766.039 kb on - strand at 766.170 kb on + strand at 766.170 kb on + strand at 766.170 kb on + strand at 766.171 kb on - strand at 766.285 kb on - strand, within AZOBR_RS03640 at 766.285 kb on - strand, within AZOBR_RS03640 at 766.488 kb on + strand, within AZOBR_RS03640 at 766.488 kb on + strand, within AZOBR_RS03640 at 766.488 kb on + strand, within AZOBR_RS03640 at 766.488 kb on + strand, within AZOBR_RS03640 at 766.488 kb on + strand, within AZOBR_RS03640 at 766.489 kb on - strand, within AZOBR_RS03640 at 766.489 kb on - strand, within AZOBR_RS03640 at 766.644 kb on + strand, within AZOBR_RS03640 at 766.645 kb on - strand, within AZOBR_RS03640 at 766.717 kb on - strand, within AZOBR_RS03640 at 766.786 kb on - strand at 766.788 kb on + strand at 766.788 kb on + strand at 766.788 kb on + strand at 766.788 kb on + strand at 766.788 kb on + strand at 766.788 kb on + strand at 766.789 kb on - strand at 766.789 kb on - strand at 766.789 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 763,664 - -1.2 763,776 + -0.0 763,776 + +0.7 763,777 - +1.6 763,777 - +0.5 764,302 + AZOBR_RS03630 0.62 +0.0 764,302 + AZOBR_RS03630 0.62 +0.4 764,302 + AZOBR_RS03630 0.62 +0.2 764,303 - AZOBR_RS03630 0.62 +0.3 764,303 - AZOBR_RS03630 0.62 +0.2 764,323 + AZOBR_RS03630 0.67 +0.7 764,323 + AZOBR_RS03630 0.67 +0.6 764,323 + AZOBR_RS03630 0.67 -0.0 764,323 + AZOBR_RS03630 0.67 +0.3 764,324 - AZOBR_RS03630 0.67 -0.4 764,325 + AZOBR_RS03630 0.67 -0.2 764,325 + AZOBR_RS03630 0.67 +0.4 764,326 - AZOBR_RS03630 0.67 +0.5 764,326 - AZOBR_RS03630 0.67 +0.2 764,880 + AZOBR_RS03635 0.24 +1.3 764,881 - AZOBR_RS03635 0.25 -0.0 764,931 + AZOBR_RS03635 0.28 +0.4 764,931 + AZOBR_RS03635 0.28 +0.0 764,931 + AZOBR_RS03635 0.28 +0.4 764,932 - AZOBR_RS03635 0.28 -1.2 764,932 - AZOBR_RS03635 0.28 +0.6 764,932 - AZOBR_RS03635 0.28 +0.0 764,938 - AZOBR_RS03635 0.29 +0.9 765,027 + AZOBR_RS03635 0.35 -0.1 765,153 + AZOBR_RS03635 0.44 +0.2 765,186 + AZOBR_RS03635 0.46 +0.9 765,187 - AZOBR_RS03635 0.46 +1.6 765,345 + AZOBR_RS03635 0.57 -0.2 765,511 - AZOBR_RS03635 0.69 -0.5 765,657 + AZOBR_RS03635 0.79 +0.6 765,657 + AZOBR_RS03635 0.79 +0.2 765,657 + AZOBR_RS03635 0.79 -0.3 765,658 - AZOBR_RS03635 0.79 -0.1 765,658 - AZOBR_RS03635 0.79 +0.3 765,658 - AZOBR_RS03635 0.79 +0.3 765,658 - AZOBR_RS03635 0.79 +0.1 765,658 - AZOBR_RS03635 0.79 +0.4 765,756 + AZOBR_RS03635 0.86 +0.6 765,757 - AZOBR_RS03635 0.86 +0.5 765,861 + +0.7 765,862 - -0.1 765,862 - -0.2 765,956 + -0.4 766,038 + -0.3 766,038 + -0.3 766,039 - -0.5 766,039 - +0.5 766,170 + -0.1 766,170 + -0.8 766,170 + +1.9 766,171 - +1.3 766,285 - AZOBR_RS03640 0.20 +0.4 766,285 - AZOBR_RS03640 0.20 +0.4 766,488 + AZOBR_RS03640 0.52 +0.1 766,488 + AZOBR_RS03640 0.52 -0.2 766,488 + AZOBR_RS03640 0.52 +0.1 766,488 + AZOBR_RS03640 0.52 +1.1 766,488 + AZOBR_RS03640 0.52 +0.2 766,489 - AZOBR_RS03640 0.52 +0.8 766,489 - AZOBR_RS03640 0.52 +0.1 766,644 + AZOBR_RS03640 0.76 -0.9 766,645 - AZOBR_RS03640 0.77 +0.7 766,717 - AZOBR_RS03640 0.88 +0.5 766,786 - -0.5 766,788 + -1.0 766,788 + -0.7 766,788 + +0.3 766,788 + -2.1 766,788 + +0.4 766,788 + +0.2 766,789 - +0.4 766,789 - -0.2 766,789 - -0.1
Or see this region's nucleotide sequence