Strain Fitness in Pseudomonas fluorescens FW300-N2E3

Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	LB
				remove
3,072,754	+	AO353_13830	0.78	-2.1
3,072,754	+	AO353_13830	0.78	-1.4
3,072,814	+	AO353_13830	0.84	+0.9
3,072,923	+			+0.2
3,072,924	-			-1.4
3,072,929	+			+1.2
3,072,929	+			-0.4
3,072,929	+			+1.0
3,072,929	+			-0.8
3,072,930	-			-0.8
3,072,930	-			-0.8
3,072,930	-			+1.5
3,072,946	+			+1.8
3,073,034	+			+1.2
3,073,034	+			+1.8
3,073,034	+			+0.2
3,073,034	+			-1.6
3,073,035	-			+1.0
3,073,035	-			+1.8
3,073,035	-			+0.0
3,073,035	-			+0.2
3,073,035	-			-0.1
3,073,048	+			+2.0
3,073,049	-			+1.0
3,073,049	-			+2.2
3,073,056	+			-0.5
3,073,066	+			-0.5
3,073,067	-			-0.1
3,073,106	+			+0.7
3,073,106	+			-0.5
3,073,119	+			+0.4
3,073,119	+			-1.1
3,073,120	-			+0.2
3,073,120	-			-0.4
3,073,120	-			-0.5
3,073,162	+			-0.8
3,073,162	+			+1.4
3,073,162	+			+1.5
3,073,163	-			-0.5
3,073,163	-			+0.2
3,073,163	-			+1.1
3,073,181	+			+1.2
3,073,182	-			+0.8
3,073,182	-			+0.0
3,073,184	+			-0.3
3,073,184	+			+1.0
3,073,184	+			-0.8
3,073,184	+			+1.0
3,073,184	+			-0.8
3,073,185	-			+2.2
3,073,185	-			+1.4
3,073,185	-			-2.4
3,073,252	+			+2.0
3,073,252	+			-0.7
3,073,253	-			+1.6
3,073,253	-			-0.5
3,073,274	-			-0.4
3,073,274	-			-0.5
3,073,286	+			+1.0
3,073,286	+			+0.2
3,073,286	+			-1.4
3,073,286	+			+2.5
3,073,287	-			+0.9
3,073,287	-			-0.6
3,073,287	-			+2.5
3,073,287	-			+0.5
3,073,287	-			+1.2
3,073,287	-			-1.0
3,073,287	-			-0.8
3,073,295	+			+1.4
3,073,296	-			+2.8
3,073,296	-			-0.5
3,073,308	+	AO353_13835	0.10	+2.2
3,073,308	+	AO353_13835	0.10	+0.2
3,073,309	-	AO353_13835	0.11	-0.4
3,073,314	+	AO353_13835	0.13	+3.2
3,073,314	+	AO353_13835	0.13	+1.2
3,073,314	+	AO353_13835	0.13	-1.9
3,073,314	+	AO353_13835	0.13	+0.6
3,073,314	+	AO353_13835	0.13	+0.2
3,073,314	+	AO353_13835	0.13	-0.4
3,073,314	+	AO353_13835	0.13	+0.6
3,073,314	+	AO353_13835	0.13	+0.2
3,073,314	+	AO353_13835	0.13	-0.8
3,073,314	+	AO353_13835	0.13	-0.9
3,073,314	+	AO353_13835	0.13	+2.8
3,073,314	+	AO353_13835	0.13	+0.8
3,073,315	-	AO353_13835	0.14	+0.0
3,073,315	-	AO353_13835	0.14	-1.8
3,073,315	-	AO353_13835	0.14	+1.0
3,073,315	-	AO353_13835	0.14	+1.2
3,073,315	-	AO353_13835	0.14	+0.4
3,073,315	-	AO353_13835	0.14	+0.2
3,073,315	-	AO353_13835	0.14	-0.2
3,073,315	-	AO353_13835	0.14	+1.2
3,073,315	-	AO353_13835	0.14	+0.7
3,073,316	+	AO353_13835	0.14	+0.2
3,073,368	+	AO353_13835	0.40	+0.5
3,073,368	+	AO353_13835	0.40	+1.9
3,073,369	-	AO353_13835	0.40	-1.0
3,073,369	-	AO353_13835	0.40	+0.5
3,073,406	-	AO353_13835	0.58	+0.1
3,073,422	-	AO353_13835	0.66	-0.2
3,073,422	-	AO353_13835	0.66	+0.1
3,073,422	-	AO353_13835	0.66	+0.2
3,073,422	-	AO353_13835	0.66	+1.2
3,073,460	+	AO353_13835	0.85	+0.8
3,073,648	+	AO353_13840	0.25	-0.8
3,073,648	+	AO353_13840	0.25	+0.2
3,073,648	+	AO353_13840	0.25	-0.3
3,073,648	+	AO353_13840	0.25	+0.2
3,073,648	+	AO353_13840	0.25	-0.3
3,073,885	+	AO353_13840	0.83	+1.2
3,073,885	+	AO353_13840	0.83	-0.8
3,073,885	+	AO353_13840	0.83	-1.8
3,073,885	+	AO353_13840	0.83	-0.1
3,073,886	-	AO353_13840	0.83	+0.2
3,073,886	-	AO353_13840	0.83	+0.7
3,073,886	-	AO353_13840	0.83	-0.6
3,073,886	-	AO353_13840	0.83	+0.5
3,073,886	-	AO353_13840	0.83	-0.8
3,073,954	+			+1.8
3,073,954	+			+1.8
3,073,954	+			+2.5
3,073,954	+			+0.2
3,073,973	+			+1.0
3,073,973	+			+0.5
3,073,973	+			-0.8
3,073,973	+			+0.8
3,073,973	+			+0.8
3,073,973	+			+1.0
3,073,973	+			+1.5
3,073,973	+			-0.8
3,073,973	+			+2.5
3,073,973	+			-1.4
3,073,974	-			+1.2
3,073,974	-			-1.4
3,073,974	-			+3.7
3,073,974	-			+2.2
3,073,974	-			-0.2
3,073,994	+			+0.8
3,073,994	+			+0.9
3,073,994	+			+0.2
3,073,994	+			+1.8
3,073,994	+			+1.5
3,073,994	+			-0.1
3,073,994	+			-0.1
3,073,994	+			-0.2
3,073,994	+			-0.2
3,073,995	-			+1.1
3,073,995	-			+2.1
3,073,995	-			-2.1
3,073,995	-			-0.4
3,073,995	-			-0.5
3,073,995	-			+1.8
3,073,995	-			+0.2
3,073,995	-			-1.8
3,073,995	-			-0.6
3,074,016	+	AO353_13845	0.10	+3.0
3,074,016	+	AO353_13845	0.10	+1.3
3,074,016	+	AO353_13845	0.10	-0.8
3,074,017	-	AO353_13845	0.11	-0.0
3,074,017	-	AO353_13845	0.11	-0.8
3,074,017	-	AO353_13845	0.11	+0.2
3,074,017	-	AO353_13845	0.11	+0.5
3,074,017	-	AO353_13845	0.11	+0.5
3,074,017	-	AO353_13845	0.11	+2.2
3,074,077	-	AO353_13845	0.40	+1.6
3,074,077	-	AO353_13845	0.40	+0.8
3,074,107	+	AO353_13845	0.55	-0.4
3,074,107	+	AO353_13845	0.55	+0.8
3,074,107	+	AO353_13845	0.55	+0.9
3,074,107	+	AO353_13845	0.55	-0.4
3,074,107	+	AO353_13845	0.55	+1.1
3,074,107	+	AO353_13845	0.55	+0.8
3,074,107	+	AO353_13845	0.55	-0.2
3,074,107	+	AO353_13845	0.55	+1.1
3,074,107	+	AO353_13845	0.55	+2.1
3,074,108	-	AO353_13845	0.55	-1.4
3,074,108	-	AO353_13845	0.55	-0.2
3,074,108	-	AO353_13845	0.55	-0.8
3,074,108	-	AO353_13845	0.55	+1.2
3,074,108	-	AO353_13845	0.55	+0.5
3,074,108	-	AO353_13845	0.55	-0.3
3,074,108	-	AO353_13845	0.55	+0.2
3,074,108	-	AO353_13845	0.55	+0.5
3,074,108	-	AO353_13845	0.55	+0.9
3,074,121	-	AO353_13845	0.62	+0.8
3,074,121	-	AO353_13845	0.62	-2.6
3,074,247	+			+1.1
3,074,263	+			+0.8
3,074,264	-			+0.5
3,074,265	+			-0.8
3,074,265	+			-0.8
3,074,265	+			-0.8
3,074,265	+			+1.9
3,074,265	+			+3.0
3,074,265	+			+0.2
3,074,265	+			+0.3
3,074,265	+			-0.4
3,074,266	-			+2.2
3,074,266	-			+0.4
3,074,266	-			-1.4
3,074,266	-			-0.1
3,074,266	-			-0.4
3,074,266	-			+0.2
3,074,266	-			-1.4
3,074,266	-			+1.0
3,074,266	-			-0.1
3,074,266	-			+0.8
3,074,355	+			+0.2
3,074,495	+			-1.8
3,074,495	+			+1.4
3,074,495	+			+0.9
3,074,495	+			-0.5
3,074,495	+			-0.1
3,074,495	+			+0.2
3,074,496	-			-0.4
3,074,496	-			+3.2
3,074,496	-			+2.0
3,074,496	-			+1.4
3,074,695	+	AO353_13850	0.15	+0.5
3,074,695	+	AO353_13850	0.15	+1.2
3,074,695	+	AO353_13850	0.15	-0.3
3,074,695	+	AO353_13850	0.15	+1.2
3,074,695	+	AO353_13850	0.15	-1.4
3,074,695	+	AO353_13850	0.15	-0.4
3,074,695	+	AO353_13850	0.15	+0.8
3,074,695	+	AO353_13850	0.15	+0.2
3,074,695	+	AO353_13850	0.15	-0.6
3,074,695	+	AO353_13850	0.15	-0.1
3,074,695	+	AO353_13850	0.15	-0.6
3,074,696	-	AO353_13850	0.15	-0.4
3,074,696	-	AO353_13850	0.15	+0.3
3,074,696	-	AO353_13850	0.15	-0.8
3,074,696	-	AO353_13850	0.15	+2.2
3,074,696	-	AO353_13850	0.15	+0.2
3,074,696	-	AO353_13850	0.15	+0.2
3,074,696	-	AO353_13850	0.15	+2.2
3,074,735	+	AO353_13850	0.17	+0.6
3,074,735	+	AO353_13850	0.17	+0.2
3,074,736	-	AO353_13850	0.17	-1.1
3,074,736	-	AO353_13850	0.17	+0.2
3,074,736	-	AO353_13850	0.17	+0.4
3,074,736	-	AO353_13850	0.17	+0.2
3,074,736	-	AO353_13850	0.17	-0.4
3,074,736	-	AO353_13850	0.17	-0.8
3,074,736	-	AO353_13850	0.17	+0.0
3,074,770	+	AO353_13850	0.19	-0.4
3,074,770	+	AO353_13850	0.19	-0.8
3,074,825	+	AO353_13850	0.22	+0.2
3,074,825	+	AO353_13850	0.22	+0.6
3,074,825	+	AO353_13850	0.22	+1.2
3,074,825	+	AO353_13850	0.22	-1.4
3,074,825	+	AO353_13850	0.22	+1.0
3,074,825	+	AO353_13850	0.22	-0.8
3,074,825	+	AO353_13850	0.22	+0.2
3,074,825	+	AO353_13850	0.22	+0.8
3,074,825	+	AO353_13850	0.22	+1.8
3,074,825	+	AO353_13850	0.22	+1.2
3,074,825	+	AO353_13850	0.22	+0.0
3,074,826	-	AO353_13850	0.22	-1.0
3,074,826	-	AO353_13850	0.22	+0.8
3,074,826	-	AO353_13850	0.22	+1.1
3,074,826	-	AO353_13850	0.22	+2.0
3,074,826	-	AO353_13850	0.22	+1.8
3,074,826	-	AO353_13850	0.22	+0.6
3,074,826	-	AO353_13850	0.22	-0.0
3,074,826	-	AO353_13850	0.22	-0.7
3,074,826	-	AO353_13850	0.22	+1.5
3,074,879	+	AO353_13850	0.24	-1.5
3,074,879	+	AO353_13850	0.24	+1.2
3,074,880	-	AO353_13850	0.24	+2.5
3,074,880	-	AO353_13850	0.24	+1.4
3,074,880	-	AO353_13850	0.24	+1.3
3,074,880	-	AO353_13850	0.24	+0.2
3,074,880	-	AO353_13850	0.24	-0.8
3,074,880	-	AO353_13850	0.24	+1.0
3,074,880	-	AO353_13850	0.24	+1.3

Or see this region's nucleotide sequence