Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12325 and AO353_12330 overlap by 8 nucleotides AO353_12330 and AO353_12335 are separated by 154 nucleotides
AO353_12325: AO353_12325 - ABC transporter permease, at 2,713,639 to 2,714,598
_12325
AO353_12330: AO353_12330 - peptide ABC transporter ATP-binding protein, at 2,714,591 to 2,715,325
_12330
AO353_12335: AO353_12335 - chemotaxis protein, at 2,715,480 to 2,717,396
_12335
Position (kb)
2714
2715
2716 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2713.714 kb on + strand at 2713.714 kb on + strand at 2713.714 kb on + strand at 2713.714 kb on + strand at 2713.715 kb on - strand at 2713.715 kb on - strand at 2713.715 kb on - strand at 2713.715 kb on - strand at 2713.715 kb on - strand at 2713.738 kb on + strand, within AO353_12325 at 2713.738 kb on + strand, within AO353_12325 at 2713.739 kb on - strand, within AO353_12325 at 2713.739 kb on - strand, within AO353_12325 at 2713.739 kb on - strand, within AO353_12325 at 2713.739 kb on - strand, within AO353_12325 at 2713.739 kb on - strand, within AO353_12325 at 2713.768 kb on + strand, within AO353_12325 at 2713.768 kb on + strand, within AO353_12325 at 2713.768 kb on + strand, within AO353_12325 at 2713.769 kb on - strand, within AO353_12325 at 2713.769 kb on - strand, within AO353_12325 at 2713.962 kb on - strand, within AO353_12325 at 2713.962 kb on - strand, within AO353_12325 at 2714.116 kb on + strand, within AO353_12325 at 2714.116 kb on + strand, within AO353_12325 at 2714.116 kb on + strand, within AO353_12325 at 2714.117 kb on - strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.156 kb on + strand, within AO353_12325 at 2714.157 kb on - strand, within AO353_12325 at 2714.157 kb on - strand, within AO353_12325 at 2714.157 kb on - strand, within AO353_12325 at 2714.157 kb on - strand, within AO353_12325 at 2714.157 kb on - strand, within AO353_12325 at 2714.157 kb on - strand, within AO353_12325 at 2714.167 kb on + strand, within AO353_12325 at 2714.167 kb on + strand, within AO353_12325 at 2714.168 kb on - strand, within AO353_12325 at 2714.168 kb on - strand, within AO353_12325 at 2714.168 kb on - strand, within AO353_12325 at 2714.168 kb on - strand, within AO353_12325 at 2714.168 kb on - strand, within AO353_12325 at 2714.168 kb on - strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.245 kb on + strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.246 kb on - strand, within AO353_12325 at 2714.527 kb on + strand at 2714.527 kb on + strand at 2714.527 kb on + strand at 2714.528 kb on - strand at 2714.528 kb on - strand at 2714.528 kb on - strand at 2714.528 kb on - strand at 2715.067 kb on + strand, within AO353_12330 at 2715.067 kb on + strand, within AO353_12330 at 2715.067 kb on + strand, within AO353_12330 at 2715.068 kb on - strand, within AO353_12330 at 2715.068 kb on - strand, within AO353_12330 at 2715.068 kb on - strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.323 kb on + strand at 2715.324 kb on - strand at 2715.369 kb on + strand at 2715.369 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.378 kb on + strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.414 kb on + strand at 2715.414 kb on + strand at 2715.414 kb on + strand at 2715.414 kb on + strand at 2715.415 kb on - strand at 2715.467 kb on + strand at 2715.467 kb on + strand at 2715.467 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,713,714 + +0.3 2,713,714 + +0.5 2,713,714 + +0.1 2,713,714 + +2.2 2,713,715 - +1.7 2,713,715 - +0.1 2,713,715 - +1.6 2,713,715 - +2.1 2,713,715 - -0.3 2,713,738 + AO353_12325 0.10 -0.3 2,713,738 + AO353_12325 0.10 +0.7 2,713,739 - AO353_12325 0.10 -0.3 2,713,739 - AO353_12325 0.10 -0.2 2,713,739 - AO353_12325 0.10 -1.7 2,713,739 - AO353_12325 0.10 -0.4 2,713,739 - AO353_12325 0.10 +0.3 2,713,768 + AO353_12325 0.13 -0.1 2,713,768 + AO353_12325 0.13 +0.3 2,713,768 + AO353_12325 0.13 +0.1 2,713,769 - AO353_12325 0.14 -0.7 2,713,769 - AO353_12325 0.14 -1.3 2,713,962 - AO353_12325 0.34 -0.3 2,713,962 - AO353_12325 0.34 +0.9 2,714,116 + AO353_12325 0.50 +1.3 2,714,116 + AO353_12325 0.50 +1.1 2,714,116 + AO353_12325 0.50 -0.7 2,714,117 - AO353_12325 0.50 -0.1 2,714,156 + AO353_12325 0.54 +0.7 2,714,156 + AO353_12325 0.54 +0.3 2,714,156 + AO353_12325 0.54 +1.9 2,714,156 + AO353_12325 0.54 -0.3 2,714,156 + AO353_12325 0.54 -0.5 2,714,156 + AO353_12325 0.54 -1.0 2,714,156 + AO353_12325 0.54 +0.9 2,714,157 - AO353_12325 0.54 +0.3 2,714,157 - AO353_12325 0.54 -2.0 2,714,157 - AO353_12325 0.54 +0.3 2,714,157 - AO353_12325 0.54 +0.6 2,714,157 - AO353_12325 0.54 +0.3 2,714,157 - AO353_12325 0.54 -1.3 2,714,167 + AO353_12325 0.55 +0.3 2,714,167 + AO353_12325 0.55 +2.3 2,714,168 - AO353_12325 0.55 -0.1 2,714,168 - AO353_12325 0.55 +0.3 2,714,168 - AO353_12325 0.55 -0.7 2,714,168 - AO353_12325 0.55 +0.3 2,714,168 - AO353_12325 0.55 -0.5 2,714,168 - AO353_12325 0.55 +0.3 2,714,245 + AO353_12325 0.63 -0.7 2,714,245 + AO353_12325 0.63 +2.3 2,714,245 + AO353_12325 0.63 +1.3 2,714,245 + AO353_12325 0.63 -0.7 2,714,245 + AO353_12325 0.63 -0.3 2,714,245 + AO353_12325 0.63 -1.5 2,714,245 + AO353_12325 0.63 +0.3 2,714,245 + AO353_12325 0.63 +1.9 2,714,245 + AO353_12325 0.63 -0.5 2,714,245 + AO353_12325 0.63 -1.3 2,714,245 + AO353_12325 0.63 -2.0 2,714,245 + AO353_12325 0.63 +2.3 2,714,245 + AO353_12325 0.63 -1.1 2,714,246 - AO353_12325 0.63 -0.7 2,714,246 - AO353_12325 0.63 +0.7 2,714,246 - AO353_12325 0.63 +0.9 2,714,246 - AO353_12325 0.63 -1.7 2,714,246 - AO353_12325 0.63 +0.3 2,714,246 - AO353_12325 0.63 -0.9 2,714,246 - AO353_12325 0.63 +0.8 2,714,246 - AO353_12325 0.63 +0.8 2,714,246 - AO353_12325 0.63 +1.6 2,714,246 - AO353_12325 0.63 -1.0 2,714,246 - AO353_12325 0.63 +0.3 2,714,246 - AO353_12325 0.63 +2.3 2,714,246 - AO353_12325 0.63 +0.8 2,714,527 + +0.3 2,714,527 + +0.7 2,714,527 + -0.5 2,714,528 - +0.1 2,714,528 - +0.3 2,714,528 - -0.2 2,714,528 - +0.3 2,715,067 + AO353_12330 0.65 +2.3 2,715,067 + AO353_12330 0.65 +0.3 2,715,067 + AO353_12330 0.65 +1.8 2,715,068 - AO353_12330 0.65 +0.1 2,715,068 - AO353_12330 0.65 +0.7 2,715,068 - AO353_12330 0.65 -0.2 2,715,073 + AO353_12330 0.66 -1.7 2,715,073 + AO353_12330 0.66 +1.7 2,715,073 + AO353_12330 0.66 +0.3 2,715,073 + AO353_12330 0.66 +0.2 2,715,073 + AO353_12330 0.66 +1.8 2,715,073 + AO353_12330 0.66 +1.3 2,715,073 + AO353_12330 0.66 +1.3 2,715,073 + AO353_12330 0.66 +1.9 2,715,074 - AO353_12330 0.66 +0.8 2,715,074 - AO353_12330 0.66 +0.8 2,715,074 - AO353_12330 0.66 -1.3 2,715,074 - AO353_12330 0.66 -0.7 2,715,074 - AO353_12330 0.66 +1.2 2,715,074 - AO353_12330 0.66 +0.7 2,715,074 - AO353_12330 0.66 +1.0 2,715,074 - AO353_12330 0.66 +1.6 2,715,074 - AO353_12330 0.66 +0.3 2,715,323 + +1.7 2,715,324 - +0.8 2,715,369 + -0.1 2,715,369 + +0.9 2,715,377 + -2.3 2,715,377 + +1.7 2,715,377 + -1.3 2,715,377 + +0.7 2,715,377 + -1.0 2,715,377 + +0.7 2,715,377 + -2.0 2,715,378 + -0.8 2,715,378 - -0.7 2,715,378 - -0.7 2,715,378 - +0.3 2,715,378 - -0.7 2,715,378 - +0.3 2,715,378 - -0.3 2,715,378 - +0.2 2,715,414 + +0.3 2,715,414 + -2.3 2,715,414 + +0.8 2,715,414 + -0.4 2,715,415 - +0.3 2,715,467 + +1.7 2,715,467 + -0.3 2,715,467 + +0.2
Or see this region's nucleotide sequence