Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11845 and AO353_11850 overlap by 4 nucleotides AO353_11850 and AO353_11855 are separated by 150 nucleotides AO353_11855 and AO353_11860 are separated by 50 nucleotides
AO353_11845: AO353_11845 - ADP-ribose diphosphatase, at 2,613,754 to 2,614,320
_11845
AO353_11850: AO353_11850 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,614,317 to 2,615,153
_11850
AO353_11855: AO353_11855 - thioesterase, at 2,615,304 to 2,615,759
_11855
AO353_11860: AO353_11860 - Fis family transcriptional regulator, at 2,615,810 to 2,617,213
_11860
Position (kb)
2615
2616 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2614.681 kb on + strand, within AO353_11850 at 2614.681 kb on + strand, within AO353_11850 at 2614.682 kb on - strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.710 kb on + strand, within AO353_11850 at 2614.711 kb on - strand, within AO353_11850 at 2614.786 kb on + strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2614.787 kb on - strand, within AO353_11850 at 2615.059 kb on - strand, within AO353_11850 at 2615.210 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.213 kb on + strand at 2615.230 kb on - strand at 2615.257 kb on - strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.320 kb on + strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.321 kb on - strand at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.375 kb on + strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.376 kb on - strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.410 kb on + strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.411 kb on - strand, within AO353_11855 at 2615.593 kb on + strand, within AO353_11855 at 2615.593 kb on + strand, within AO353_11855 at 2615.593 kb on + strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.594 kb on - strand, within AO353_11855 at 2615.658 kb on + strand, within AO353_11855 at 2615.658 kb on + strand, within AO353_11855 at 2615.658 kb on + strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.659 kb on - strand, within AO353_11855 at 2615.682 kb on + strand, within AO353_11855 at 2615.683 kb on - strand, within AO353_11855 at 2615.683 kb on - strand, within AO353_11855 at 2615.696 kb on + strand, within AO353_11855 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.019 kb on + strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.020 kb on - strand, within AO353_11860 at 2616.288 kb on + strand, within AO353_11860 at 2616.289 kb on - strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.291 kb on + strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.292 kb on - strand, within AO353_11860 at 2616.533 kb on - strand, within AO353_11860
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,614,681 + AO353_11850 0.43 -0.2 2,614,681 + AO353_11850 0.43 +0.4 2,614,682 - AO353_11850 0.44 +0.4 2,614,710 + AO353_11850 0.47 +0.4 2,614,710 + AO353_11850 0.47 +0.4 2,614,710 + AO353_11850 0.47 +0.8 2,614,710 + AO353_11850 0.47 -0.2 2,614,711 - AO353_11850 0.47 -0.8 2,614,786 + AO353_11850 0.56 +0.4 2,614,787 - AO353_11850 0.56 -1.2 2,614,787 - AO353_11850 0.56 -0.6 2,614,787 - AO353_11850 0.56 -2.6 2,614,787 - AO353_11850 0.56 +0.1 2,614,787 - AO353_11850 0.56 -0.6 2,614,787 - AO353_11850 0.56 -0.4 2,615,059 - AO353_11850 0.89 -2.4 2,615,210 + +1.3 2,615,213 + -1.9 2,615,213 + -0.2 2,615,213 + +1.5 2,615,213 + -0.0 2,615,213 + +0.7 2,615,213 + -1.4 2,615,230 - +0.4 2,615,257 - +0.8 2,615,320 + +0.0 2,615,320 + +0.6 2,615,320 + -1.2 2,615,320 + +1.4 2,615,320 + -0.6 2,615,320 + -1.2 2,615,320 + -0.6 2,615,320 + +3.0 2,615,320 + -1.8 2,615,321 - +0.4 2,615,321 - +0.4 2,615,321 - +0.6 2,615,321 - +0.8 2,615,321 - -0.6 2,615,321 - -0.4 2,615,321 - -0.6 2,615,321 - +1.0 2,615,321 - -1.2 2,615,321 - +0.8 2,615,321 - +0.2 2,615,321 - -1.6 2,615,321 - +1.4 2,615,321 - -0.6 2,615,321 - -0.9 2,615,375 + AO353_11855 0.16 +0.8 2,615,375 + AO353_11855 0.16 +0.7 2,615,375 + AO353_11855 0.16 -0.2 2,615,375 + AO353_11855 0.16 -0.6 2,615,375 + AO353_11855 0.16 +0.1 2,615,375 + AO353_11855 0.16 +0.9 2,615,375 + AO353_11855 0.16 -1.6 2,615,375 + AO353_11855 0.16 -0.6 2,615,375 + AO353_11855 0.16 +0.4 2,615,375 + AO353_11855 0.16 +0.4 2,615,375 + AO353_11855 0.16 +0.4 2,615,375 + AO353_11855 0.16 +1.0 2,615,375 + AO353_11855 0.16 +0.2 2,615,375 + AO353_11855 0.16 -1.2 2,615,375 + AO353_11855 0.16 +2.2 2,615,376 - AO353_11855 0.16 +1.6 2,615,376 - AO353_11855 0.16 +0.2 2,615,376 - AO353_11855 0.16 +2.0 2,615,376 - AO353_11855 0.16 +0.1 2,615,376 - AO353_11855 0.16 -1.6 2,615,376 - AO353_11855 0.16 +0.4 2,615,376 - AO353_11855 0.16 +0.8 2,615,376 - AO353_11855 0.16 +0.4 2,615,376 - AO353_11855 0.16 +0.5 2,615,376 - AO353_11855 0.16 +0.2 2,615,376 - AO353_11855 0.16 +2.0 2,615,376 - AO353_11855 0.16 -1.9 2,615,376 - AO353_11855 0.16 +0.4 2,615,410 + AO353_11855 0.23 -0.4 2,615,410 + AO353_11855 0.23 +0.9 2,615,410 + AO353_11855 0.23 -1.2 2,615,410 + AO353_11855 0.23 -0.0 2,615,410 + AO353_11855 0.23 +1.0 2,615,410 + AO353_11855 0.23 -1.6 2,615,410 + AO353_11855 0.23 +0.4 2,615,411 - AO353_11855 0.23 +0.6 2,615,411 - AO353_11855 0.23 +0.4 2,615,411 - AO353_11855 0.23 +0.6 2,615,411 - AO353_11855 0.23 +0.4 2,615,411 - AO353_11855 0.23 +0.4 2,615,411 - AO353_11855 0.23 -0.0 2,615,411 - AO353_11855 0.23 -0.4 2,615,411 - AO353_11855 0.23 -2.8 2,615,411 - AO353_11855 0.23 -0.2 2,615,593 + AO353_11855 0.63 -1.9 2,615,593 + AO353_11855 0.63 +0.5 2,615,593 + AO353_11855 0.63 -1.4 2,615,594 - AO353_11855 0.64 +0.1 2,615,594 - AO353_11855 0.64 +0.4 2,615,594 - AO353_11855 0.64 +0.0 2,615,594 - AO353_11855 0.64 -1.2 2,615,658 + AO353_11855 0.78 +0.1 2,615,658 + AO353_11855 0.78 -0.8 2,615,658 + AO353_11855 0.78 +0.9 2,615,659 - AO353_11855 0.78 -1.6 2,615,659 - AO353_11855 0.78 -1.2 2,615,659 - AO353_11855 0.78 -0.6 2,615,659 - AO353_11855 0.78 -0.7 2,615,659 - AO353_11855 0.78 +1.4 2,615,659 - AO353_11855 0.78 +1.1 2,615,682 + AO353_11855 0.83 -0.8 2,615,683 - AO353_11855 0.83 -0.0 2,615,683 - AO353_11855 0.83 -0.0 2,615,696 + AO353_11855 0.86 +2.4 2,616,019 + AO353_11860 0.15 -0.0 2,616,019 + AO353_11860 0.15 -0.2 2,616,019 + AO353_11860 0.15 +0.1 2,616,019 + AO353_11860 0.15 -0.6 2,616,019 + AO353_11860 0.15 +0.6 2,616,019 + AO353_11860 0.15 -0.8 2,616,020 - AO353_11860 0.15 +0.4 2,616,020 - AO353_11860 0.15 +0.4 2,616,020 - AO353_11860 0.15 +1.2 2,616,020 - AO353_11860 0.15 -0.1 2,616,020 - AO353_11860 0.15 +0.8 2,616,020 - AO353_11860 0.15 +0.6 2,616,020 - AO353_11860 0.15 -0.2 2,616,288 + AO353_11860 0.34 +0.5 2,616,289 - AO353_11860 0.34 +0.4 2,616,291 + AO353_11860 0.34 +0.4 2,616,291 + AO353_11860 0.34 +1.1 2,616,291 + AO353_11860 0.34 +0.4 2,616,291 + AO353_11860 0.34 +1.6 2,616,291 + AO353_11860 0.34 -0.6 2,616,291 + AO353_11860 0.34 +0.8 2,616,291 + AO353_11860 0.34 +2.1 2,616,291 + AO353_11860 0.34 -0.6 2,616,291 + AO353_11860 0.34 +0.0 2,616,291 + AO353_11860 0.34 -0.6 2,616,292 - AO353_11860 0.34 -0.3 2,616,292 - AO353_11860 0.34 -0.6 2,616,292 - AO353_11860 0.34 +2.0 2,616,292 - AO353_11860 0.34 +2.3 2,616,292 - AO353_11860 0.34 +0.4 2,616,533 - AO353_11860 0.51 -0.6
Or see this region's nucleotide sequence