Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05140 and AO353_05145 overlap by 1 nucleotides AO353_05145 and AO353_05150 overlap by 1 nucleotides AO353_05150 and AO353_05155 are separated by 276 nucleotides
AO353_05140: AO353_05140 - outer membrane lipid asymmetry maintenance protein MlaD, at 1,133,668 to 1,134,135
_05140
AO353_05145: AO353_05145 - ABC transporter permease, at 1,134,135 to 1,134,932
_05145
AO353_05150: AO353_05150 - ABC transporter ATP-binding protein, at 1,134,932 to 1,135,741
_05150
AO353_05155: AO353_05155 - D-arabinose 5-phosphate isomerase, at 1,136,018 to 1,136,992
_05155
Position (kb)
1134
1135
1136 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1133.991 kb on + strand, within AO353_05140 at 1134.002 kb on + strand, within AO353_05140 at 1134.002 kb on + strand, within AO353_05140 at 1134.002 kb on + strand, within AO353_05140 at 1134.003 kb on - strand, within AO353_05140 at 1134.015 kb on + strand, within AO353_05140 at 1134.015 kb on + strand, within AO353_05140 at 1134.015 kb on + strand, within AO353_05140 at 1134.015 kb on + strand, within AO353_05140 at 1134.017 kb on + strand, within AO353_05140 at 1134.017 kb on + strand, within AO353_05140 at 1134.017 kb on + strand, within AO353_05140 at 1134.017 kb on + strand, within AO353_05140 at 1134.018 kb on - strand, within AO353_05140 at 1134.018 kb on - strand, within AO353_05140 at 1134.073 kb on + strand, within AO353_05140 at 1134.073 kb on + strand, within AO353_05140 at 1134.074 kb on - strand, within AO353_05140 at 1134.074 kb on - strand, within AO353_05140 at 1134.074 kb on - strand, within AO353_05140 at 1134.074 kb on - strand, within AO353_05140 at 1134.074 kb on - strand, within AO353_05140 at 1134.167 kb on + strand at 1134.167 kb on + strand at 1134.199 kb on + strand at 1134.199 kb on + strand at 1134.199 kb on + strand at 1134.199 kb on + strand at 1134.199 kb on + strand at 1134.199 kb on + strand at 1134.256 kb on + strand, within AO353_05145 at 1134.256 kb on + strand, within AO353_05145 at 1134.256 kb on + strand, within AO353_05145 at 1134.256 kb on + strand, within AO353_05145 at 1134.256 kb on + strand, within AO353_05145 at 1134.256 kb on + strand, within AO353_05145 at 1134.256 kb on + strand, within AO353_05145 at 1134.308 kb on + strand, within AO353_05145 at 1134.308 kb on + strand, within AO353_05145 at 1134.308 kb on + strand, within AO353_05145 at 1134.308 kb on + strand, within AO353_05145 at 1134.308 kb on + strand, within AO353_05145 at 1134.324 kb on + strand, within AO353_05145 at 1134.324 kb on + strand, within AO353_05145 at 1134.324 kb on + strand, within AO353_05145 at 1134.367 kb on + strand, within AO353_05145 at 1134.367 kb on + strand, within AO353_05145 at 1134.379 kb on + strand, within AO353_05145 at 1134.379 kb on + strand, within AO353_05145 at 1134.379 kb on + strand, within AO353_05145 at 1134.379 kb on + strand, within AO353_05145 at 1134.379 kb on + strand, within AO353_05145 at 1134.496 kb on + strand, within AO353_05145 at 1134.496 kb on + strand, within AO353_05145 at 1134.496 kb on + strand, within AO353_05145 at 1134.496 kb on + strand, within AO353_05145 at 1134.496 kb on + strand, within AO353_05145 at 1134.679 kb on + strand, within AO353_05145 at 1134.912 kb on + strand at 1134.912 kb on + strand at 1134.913 kb on - strand at 1134.913 kb on - strand at 1134.915 kb on + strand at 1134.916 kb on - strand at 1135.088 kb on + strand, within AO353_05150 at 1135.088 kb on + strand, within AO353_05150 at 1135.088 kb on + strand, within AO353_05150 at 1135.088 kb on + strand, within AO353_05150 at 1135.088 kb on + strand, within AO353_05150 at 1135.088 kb on + strand, within AO353_05150 at 1135.088 kb on + strand, within AO353_05150 at 1135.095 kb on + strand, within AO353_05150 at 1135.095 kb on + strand, within AO353_05150 at 1135.095 kb on + strand, within AO353_05150 at 1135.095 kb on + strand, within AO353_05150 at 1135.095 kb on + strand, within AO353_05150 at 1135.095 kb on + strand, within AO353_05150 at 1135.111 kb on + strand, within AO353_05150 at 1135.112 kb on - strand, within AO353_05150 at 1135.239 kb on + strand, within AO353_05150 at 1135.239 kb on + strand, within AO353_05150 at 1135.239 kb on + strand, within AO353_05150 at 1135.403 kb on - strand, within AO353_05150 at 1135.483 kb on + strand, within AO353_05150 at 1135.483 kb on + strand, within AO353_05150 at 1135.484 kb on - strand, within AO353_05150 at 1135.666 kb on + strand at 1135.722 kb on + strand at 1135.743 kb on + strand at 1135.743 kb on + strand at 1135.743 kb on + strand at 1135.744 kb on - strand at 1135.744 kb on - strand at 1135.744 kb on - strand at 1135.744 kb on - strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.834 kb on + strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.835 kb on - strand at 1135.836 kb on + strand at 1135.836 kb on + strand at 1135.836 kb on + strand at 1135.836 kb on + strand at 1135.837 kb on - strand at 1135.837 kb on - strand at 1135.837 kb on - strand at 1135.900 kb on + strand at 1135.900 kb on + strand at 1135.900 kb on + strand at 1135.900 kb on + strand at 1135.901 kb on - strand at 1135.901 kb on - strand at 1135.901 kb on - strand at 1135.901 kb on - strand at 1135.901 kb on - strand at 1135.901 kb on - strand at 1135.952 kb on + strand at 1135.952 kb on + strand at 1135.952 kb on + strand at 1135.952 kb on + strand at 1135.952 kb on + strand at 1135.953 kb on - strand at 1135.953 kb on - strand at 1135.979 kb on + strand at 1136.005 kb on + strand at 1136.005 kb on + strand at 1136.005 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,133,991 + AO353_05140 0.69 -1.9 1,134,002 + AO353_05140 0.71 +0.7 1,134,002 + AO353_05140 0.71 +0.7 1,134,002 + AO353_05140 0.71 -1.3 1,134,003 - AO353_05140 0.72 +2.7 1,134,015 + AO353_05140 0.74 +0.1 1,134,015 + AO353_05140 0.74 +0.5 1,134,015 + AO353_05140 0.74 +2.0 1,134,015 + AO353_05140 0.74 -0.3 1,134,017 + AO353_05140 0.75 +1.1 1,134,017 + AO353_05140 0.75 -1.9 1,134,017 + AO353_05140 0.75 +0.1 1,134,017 + AO353_05140 0.75 +1.1 1,134,018 - AO353_05140 0.75 -0.9 1,134,018 - AO353_05140 0.75 -0.9 1,134,073 + AO353_05140 0.87 -0.5 1,134,073 + AO353_05140 0.87 -0.8 1,134,074 - AO353_05140 0.87 -0.8 1,134,074 - AO353_05140 0.87 +0.1 1,134,074 - AO353_05140 0.87 +0.1 1,134,074 - AO353_05140 0.87 -0.5 1,134,074 - AO353_05140 0.87 +0.3 1,134,167 + +0.1 1,134,167 + +0.7 1,134,199 + -1.5 1,134,199 + +0.5 1,134,199 + +1.4 1,134,199 + +1.1 1,134,199 + -0.9 1,134,199 + +1.9 1,134,256 + AO353_05145 0.15 +0.3 1,134,256 + AO353_05145 0.15 -1.5 1,134,256 + AO353_05145 0.15 -0.8 1,134,256 + AO353_05145 0.15 -0.3 1,134,256 + AO353_05145 0.15 +0.4 1,134,256 + AO353_05145 0.15 +0.1 1,134,256 + AO353_05145 0.15 -1.5 1,134,308 + AO353_05145 0.22 +2.4 1,134,308 + AO353_05145 0.22 -0.9 1,134,308 + AO353_05145 0.22 -0.9 1,134,308 + AO353_05145 0.22 -0.4 1,134,308 + AO353_05145 0.22 +1.3 1,134,324 + AO353_05145 0.24 +1.4 1,134,324 + AO353_05145 0.24 -0.2 1,134,324 + AO353_05145 0.24 -1.5 1,134,367 + AO353_05145 0.29 -1.9 1,134,367 + AO353_05145 0.29 -0.5 1,134,379 + AO353_05145 0.31 +0.5 1,134,379 + AO353_05145 0.31 -1.1 1,134,379 + AO353_05145 0.31 -0.6 1,134,379 + AO353_05145 0.31 +1.5 1,134,379 + AO353_05145 0.31 +1.1 1,134,496 + AO353_05145 0.45 -0.9 1,134,496 + AO353_05145 0.45 -0.5 1,134,496 + AO353_05145 0.45 +0.5 1,134,496 + AO353_05145 0.45 +0.1 1,134,496 + AO353_05145 0.45 +0.1 1,134,679 + AO353_05145 0.68 -0.8 1,134,912 + +2.9 1,134,912 + -1.1 1,134,913 - +0.4 1,134,913 - +1.4 1,134,915 + -0.9 1,134,916 - +1.1 1,135,088 + AO353_05150 0.19 -1.5 1,135,088 + AO353_05150 0.19 -0.9 1,135,088 + AO353_05150 0.19 -1.5 1,135,088 + AO353_05150 0.19 -0.6 1,135,088 + AO353_05150 0.19 -2.5 1,135,088 + AO353_05150 0.19 +1.4 1,135,088 + AO353_05150 0.19 +1.7 1,135,095 + AO353_05150 0.20 +2.1 1,135,095 + AO353_05150 0.20 +0.8 1,135,095 + AO353_05150 0.20 +0.1 1,135,095 + AO353_05150 0.20 +0.1 1,135,095 + AO353_05150 0.20 -0.5 1,135,095 + AO353_05150 0.20 -0.6 1,135,111 + AO353_05150 0.22 -1.9 1,135,112 - AO353_05150 0.22 +0.7 1,135,239 + AO353_05150 0.38 -0.6 1,135,239 + AO353_05150 0.38 -1.5 1,135,239 + AO353_05150 0.38 -0.9 1,135,403 - AO353_05150 0.58 -1.5 1,135,483 + AO353_05150 0.68 +0.1 1,135,483 + AO353_05150 0.68 +1.7 1,135,484 - AO353_05150 0.68 -0.5 1,135,666 + -0.2 1,135,722 + -0.9 1,135,743 + -0.6 1,135,743 + -0.9 1,135,743 + -0.9 1,135,744 - +0.1 1,135,744 - +0.1 1,135,744 - +0.4 1,135,744 - +1.1 1,135,834 + -0.9 1,135,834 + +0.1 1,135,834 + -0.3 1,135,834 + -0.2 1,135,834 + +0.1 1,135,834 + +0.9 1,135,834 + +2.1 1,135,834 + -0.2 1,135,834 + +0.1 1,135,834 + +0.1 1,135,834 + +0.5 1,135,834 + +2.1 1,135,834 + -1.7 1,135,834 + -0.2 1,135,835 - +0.1 1,135,835 - -0.9 1,135,835 - +1.7 1,135,835 - +0.1 1,135,835 - +0.6 1,135,835 - -0.5 1,135,835 - +0.6 1,135,835 - +0.1 1,135,835 - +0.5 1,135,835 - +1.7 1,135,835 - -0.6 1,135,835 - -0.9 1,135,835 - +1.7 1,135,835 - -1.5 1,135,835 - +2.4 1,135,835 - -0.9 1,135,835 - +0.9 1,135,836 + +0.3 1,135,836 + +1.0 1,135,836 + +1.3 1,135,836 + -0.9 1,135,837 - -0.9 1,135,837 - +0.1 1,135,837 - +0.7 1,135,900 + +1.4 1,135,900 + -0.6 1,135,900 + +0.6 1,135,900 + +1.1 1,135,901 - -0.3 1,135,901 - +0.3 1,135,901 - -1.9 1,135,901 - +0.1 1,135,901 - -0.2 1,135,901 - +0.1 1,135,952 + +0.3 1,135,952 + +2.4 1,135,952 + -2.2 1,135,952 + -2.2 1,135,952 + -1.5 1,135,953 - +0.8 1,135,953 - -0.4 1,135,979 + -0.9 1,136,005 + +0.1 1,136,005 + -1.5 1,136,005 + +0.5
Or see this region's nucleotide sequence